RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 EPOPA6NHQ4 379 aa17.68■□□□□ 0.42
DDX41-214ENST00000512334 C9IYK1 514 aa17.68■□□□□ 0.42
DDX41-214ENST00000512334 DGKIO75912 1065 aa17.68■□□□□ 0.42
DDX41-214ENST00000512334 TFDP1Q14186 410 aa17.68■□□□□ 0.42
DDX41-214ENST00000512334 BTG3Q14201 252 aaPredicted RBP17.68■□□□□ 0.42
DDX41-214ENST00000512334 DSC3Q14574 896 aa17.68■□□□□ 0.42
DDX41-214ENST00000512334 FAM102BQ5T8I3 360 aa17.68■□□□□ 0.42
DDX41-214ENST00000512334 FAM173BQ6P4H8 233 aa17.68■□□□□ 0.42
DDX41-214ENST00000512334 PADI6Q6TGC4 694 aa17.68■□□□□ 0.42
DDX41-214ENST00000512334 MCPH1Q8NEM0 835 aa17.68■□□□□ 0.42
DDX41-214ENST00000512334 ASAP3Q8TDY4 903 aa17.68■□□□□ 0.42
DDX41-214ENST00000512334 POLR3FQ9H1D9 316 aaPredicted RBP17.68■□□□□ 0.42
DDX41-214ENST00000512334 BHMT2Q9H2M3 363 aa17.68■□□□□ 0.42
DDX41-214ENST00000512334 IFT122Q9HBG6 1241 aa17.68■□□□□ 0.42
DDX41-214ENST00000512334 ARL2P36404 184 aa17.67■□□□□ 0.42
DDX41-214ENST00000512334 PHKA2P46019 1235 aa17.67■□□□□ 0.42
DDX41-214ENST00000512334 ERVK-21P61565 698 aa17.67■□□□□ 0.42
DDX41-214ENST00000512334 CEBPZQ03701 1054 aaKnown RBP17.67■□□□□ 0.42
DDX41-214ENST00000512334 ADGRE1Q14246 886 aa17.67■□□□□ 0.42
DDX41-214ENST00000512334 PAN2Q504Q3 1202 aaKnown RBP17.67■□□□□ 0.42
DDX41-214ENST00000512334 SRGAP1Q7Z6B7 1085 aa17.67■□□□□ 0.42
DDX41-214ENST00000512334 MAFAQ8NHW3 353 aaPredicted RBP17.67■□□□□ 0.42
DDX41-214ENST00000512334 CDK5RAP3Q96JB5 506 aa17.67■□□□□ 0.42
DDX41-214ENST00000512334 C17orf80Q9BSJ5 609 aa17.67■□□□□ 0.42
DDX41-214ENST00000512334 MMTAG2Q9BU76 263 aaKnown RBP17.67■□□□□ 0.42
DDX41-214ENST00000512334 ZSCAN16Q9H4T2 348 aaPredicted RBP17.67■□□□□ 0.42
DDX41-214ENST00000512334 GPRC5CQ9NQ84 441 aa17.67■□□□□ 0.42
DDX41-214ENST00000512334 DACT1Q9NYF0 836 aa17.67■□□□□ 0.42
DDX41-214ENST00000512334 DNM3Q9UQ16 869 aa17.67■□□□□ 0.42
DDX41-214ENST00000512334 PIN4Q9Y237 131 aaKnown RBP17.67■□□□□ 0.42
DDX41-214ENST00000512334 CLIC4Q9Y696 253 aa17.67■□□□□ 0.42
DDX41-214ENST00000512334 E9PMD0 336 aa17.66■□□□□ 0.42
DDX41-214ENST00000512334 GATMP50440 423 aa17.66■□□□□ 0.42
DDX41-214ENST00000512334 FOXD4L5Q5VV16 416 aaPredicted RBP17.66■□□□□ 0.42
DDX41-214ENST00000512334 TWF2Q6IBS0 349 aaKnown RBP17.66■□□□□ 0.42
DDX41-214ENST00000512334 CRIPAKQ8N1N5 446 aa17.66■□□□□ 0.42
DDX41-214ENST00000512334 RNF169Q8NCN4 708 aa17.66■□□□□ 0.42
DDX41-214ENST00000512334 FBXO22Q8NEZ5 403 aa17.66■□□□□ 0.42
DDX41-214ENST00000512334 GDPD5Q8WTR4 605 aa17.66■□□□□ 0.42
DDX41-214ENST00000512334 FOXD4L4Q8WXT5 416 aaPredicted RBP17.66■□□□□ 0.42
DDX41-214ENST00000512334 ZNF689Q96CS4 500 aaPredicted RBP17.66■□□□□ 0.42
DDX41-214ENST00000512334 RC3H2Q9HBD1 1191 aaKnown RBP17.66■□□□□ 0.42
DDX41-214ENST00000512334 CHST12Q9NRB3 414 aa17.66■□□□□ 0.42
DDX41-214ENST00000512334 CHD9Q3L8U1 2897 aa17.66■□□□□ 0.42
DDX41-214ENST00000512334 TBKBP1A7MCY6 615 aa17.65■□□□□ 0.42
DDX41-214ENST00000512334 INO80B-WBP1J3KQ70 363 aa17.65■□□□□ 0.42
DDX41-214ENST00000512334 GTPBP6O43824 516 aaPredicted RBP17.65■□□□□ 0.42
DDX41-214ENST00000512334 ERLIN2O94905 339 aa17.65■□□□□ 0.42
DDX41-214ENST00000512334 CYP11B2P19099 503 aa17.65■□□□□ 0.42
DDX41-214ENST00000512334 GLRA2P23416 452 aa17.65■□□□□ 0.42
DDX41-214ENST00000512334 CAPSQ13938 189 aa17.65■□□□□ 0.42
DDX41-214ENST00000512334 CABP7Q86V35 215 aa17.65■□□□□ 0.42
DDX41-214ENST00000512334 MICALL1Q8N3F8 863 aa17.65■□□□□ 0.42
DDX41-214ENST00000512334 PPM1EQ8WY54 764 aa17.65■□□□□ 0.42
DDX41-214ENST00000512334 AK8Q96MA6 479 aa17.65■□□□□ 0.42
DDX41-214ENST00000512334 SAMD11Q96NU1 681 aa17.65■□□□□ 0.42
DDX41-214ENST00000512334 PLIN2Q99541 437 aa17.65■□□□□ 0.42
DDX41-214ENST00000512334 ELAC1Q9H777 363 aaKnown RBP17.65■□□□□ 0.42
DDX41-214ENST00000512334 MINDY3Q9H8M7 445 aa17.65■□□□□ 0.42
DDX41-214ENST00000512334 TMEM161AQ9NX61 479 aa17.65■□□□□ 0.42
DDX41-214ENST00000512334 COL4A6Q14031 1691 aa17.64■□□□□ 0.42
DDX41-214ENST00000512334 LRRIQ4A6NIV6 560 aa17.64■□□□□ 0.41
DDX41-214ENST00000512334 EYA4O95677 639 aa17.64■□□□□ 0.41
DDX41-214ENST00000512334 FGFR1P11362 822 aa17.64■□□□□ 0.41
DDX41-214ENST00000512334 MARCKSP29966 332 aaPredicted RBP17.64■□□□□ 0.41
DDX41-214ENST00000512334 CTNNB1P35222 781 aa17.64■□□□□ 0.41
DDX41-214ENST00000512334 UBA7P41226 1012 aa17.64■□□□□ 0.41
DDX41-214ENST00000512334 PTENP60484 403 aa17.64■□□□□ 0.41
DDX41-214ENST00000512334 FAM189BP81408 668 aa17.64■□□□□ 0.41
DDX41-214ENST00000512334 GRB10Q13322 594 aa17.64■□□□□ 0.41
DDX41-214ENST00000512334 EPC2Q52LR7 807 aa17.64■□□□□ 0.41
DDX41-214ENST00000512334 ECHDC2Q86YB7 292 aa17.64■□□□□ 0.41
DDX41-214ENST00000512334 TMEM192Q8IY95 271 aa17.64■□□□□ 0.41
DDX41-214ENST00000512334 CMTR2Q8IYT2 770 aaKnown RBP17.64■□□□□ 0.41
DDX41-214ENST00000512334 RASSF8Q8NHQ8 419 aa17.64■□□□□ 0.41
DDX41-214ENST00000512334 NT5C3AQ9H0P0 336 aa17.64■□□□□ 0.41
DDX41-214ENST00000512334 AGPAT5Q9NUQ2 364 aa17.64■□□□□ 0.41
DDX41-214ENST00000512334 CHD7Q9P2D1 2997 aa17.64■□□□□ 0.41
DDX41-214ENST00000512334 COL4A4P53420 1690 aaPredicted RBP17.64■□□□□ 0.41
DDX41-214ENST00000512334 NLRC5Q86WI3 1866 aa17.63■□□□□ 0.41
DDX41-214ENST00000512334 A0A0U1RQF3 1178 aa17.63■□□□□ 0.41
DDX41-214ENST00000512334 SSBP05455 408 aaKnown RBP eCLIP17.63■□□□□ 0.41
DDX41-214ENST00000512334 LONP1P36776 959 aaKnown RBP17.63■□□□□ 0.41
DDX41-214ENST00000512334 GRIN1Q05586 938 aa17.63■□□□□ 0.41
DDX41-214ENST00000512334 POU5F1BQ06416 359 aa17.63■□□□□ 0.41
DDX41-214ENST00000512334 CCDC85BQ15834 202 aaPredicted RBP17.63■□□□□ 0.41
DDX41-214ENST00000512334 KCNK18Q7Z418 384 aa17.63■□□□□ 0.41
DDX41-214ENST00000512334 ABI1Q8IZP0 508 aa17.63■□□□□ 0.41
DDX41-214ENST00000512334 CALML4Q96GE6 196 aa17.63■□□□□ 0.41
DDX41-214ENST00000512334 PNMA5Q96PV4 448 aa17.63■□□□□ 0.41
DDX41-214ENST00000512334 RWDD3Q9Y3V2 267 aa17.63■□□□□ 0.41
DDX41-214ENST00000512334 MRPL42Q9Y6G3 142 aaKnown RBP17.63■□□□□ 0.41
DDX41-214ENST00000512334 HOXA2O43364 376 aa17.62■□□□□ 0.41
DDX41-214ENST00000512334 PDIA4P13667 645 aaKnown RBP17.62■□□□□ 0.41
DDX41-214ENST00000512334 NCBP1Q09161 790 aaKnown RBP17.62■□□□□ 0.41
DDX41-214ENST00000512334 PTPAQ15257 358 aa17.62■□□□□ 0.41
DDX41-214ENST00000512334 HYIQ5T013 277 aa17.62■□□□□ 0.41
DDX41-214ENST00000512334 SPOUT1Q5T280 376 aaKnown RBP17.62■□□□□ 0.41
DDX41-214ENST00000512334 ZBTB8OSQ8IWT0 167 aa17.62■□□□□ 0.41
DDX41-214ENST00000512334 IFT74Q96LB3 600 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms