RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 ELMSAN1Q6PJG2 1045 aa7.79□□□□□ -1.16
COPS4-209ENST00000511653 RNF207Q6ZRF8 634 aa7.79□□□□□ -1.16
COPS4-209ENST00000511653 HS2ST1Q7LGA3 356 aa7.79□□□□□ -1.16
COPS4-209ENST00000511653 ZNF589Q86UQ0 364 aaPredicted RBP7.79□□□□□ -1.16
COPS4-209ENST00000511653 MTG1Q9BT17 334 aaPredicted RBP7.79□□□□□ -1.16
COPS4-209ENST00000511653 SEZ6LQ9BYH1 1024 aa7.79□□□□□ -1.16
COPS4-209ENST00000511653 TGIF2Q9GZN2 237 aa7.79□□□□□ -1.16
COPS4-209ENST00000511653 TOMM22Q9NS69 142 aa7.79□□□□□ -1.16
COPS4-209ENST00000511653 SOX13Q9UN79 622 aa7.79□□□□□ -1.16
COPS4-209ENST00000511653 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.79□□□□□ -1.16
COPS4-209ENST00000511653 MTCH2Q9Y6C9 303 aa7.79□□□□□ -1.16
COPS4-209ENST00000511653 NLRC5Q86WI3 1866 aa7.78□□□□□ -1.16
COPS4-209ENST00000511653 ENC1O14682 589 aa7.78□□□□□ -1.16
COPS4-209ENST00000511653 FGAP02671 866 aa7.78□□□□□ -1.16
COPS4-209ENST00000511653 ALBP02768 609 aa7.78□□□□□ -1.16
COPS4-209ENST00000511653 PFKMP08237 780 aa7.78□□□□□ -1.16
COPS4-209ENST00000511653 TOP1P11387 765 aaKnown RBP7.78□□□□□ -1.16
COPS4-209ENST00000511653 PPP2R5BQ15173 497 aa7.78□□□□□ -1.16
COPS4-209ENST00000511653 ZNF423Q2M1K9 1284 aa7.78□□□□□ -1.16
COPS4-209ENST00000511653 TMEM67Q5HYA8 995 aa7.78□□□□□ -1.16
COPS4-209ENST00000511653 GDF6Q6KF10 455 aaPredicted RBP7.78□□□□□ -1.16
COPS4-209ENST00000511653 C20orf204Q6ZNR8 217 aa7.78□□□□□ -1.16
COPS4-209ENST00000511653 TMCO2Q7Z6W1 182 aaPredicted RBP7.78□□□□□ -1.16
COPS4-209ENST00000511653 TBC1D10CQ8IV04 446 aa7.78□□□□□ -1.16
COPS4-209ENST00000511653 CTAGE1Q96RT6 745 aa7.78□□□□□ -1.16
COPS4-209ENST00000511653 PPP4R2Q9NY27 417 aa7.78□□□□□ -1.16
COPS4-209ENST00000511653 TLR6Q9Y2C9 796 aa7.78□□□□□ -1.16
COPS4-209ENST00000511653 USP34Q70CQ2 3546 aa7.78□□□□□ -1.16
COPS4-209ENST00000511653 ZDBF2Q9HCK1 2354 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 LOC102724159A0A0B4J2E5 919 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 LCHNA4D1U4 455 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 IQCF3P0C7M6 154 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 SUPT20HL2P0C7V6 817 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 GOLGA8HP0CJ92 632 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 SNHG28P0DPA3 235 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 EPXP11678 715 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 EPHA1P21709 976 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 CHMP4BP1P59074 171 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 TAP1Q03518 808 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 SRSF11Q05519 484 aaKnown RBP7.77□□□□□ -1.17
COPS4-209ENST00000511653 ZNF543Q08ER8 600 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 NMIQ13287 307 aaPredicted RBP7.77□□□□□ -1.17
COPS4-209ENST00000511653 GPNMBQ14956 572 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 PWP2Q15269 919 aaKnown RBP7.77□□□□□ -1.17
COPS4-209ENST00000511653 ALX1Q15699 326 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 TCTN1Q2MV58 587 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 USH1GQ495M9 461 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 STK35Q8TDR2 534 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 SCFD2Q8WU76 684 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 ARNTL2Q8WYA1 636 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 SLC9A7Q96T83 725 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 COL20A1Q9P218 1284 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 NEDD4P46934 1319 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 WDR19Q8NEZ3 1342 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 ZNF318Q5VUA4 2279 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 DMDP11532 3685 aa7.77□□□□□ -1.17
COPS4-209ENST00000511653 SHISA8B8ZZ34 492 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 LPXNO60711 386 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 SMNDC1O75940 238 aaKnown RBP eCLIP7.76□□□□□ -1.17
COPS4-209ENST00000511653 CACNA1HO95180 2353 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 ZMYM6O95789 1325 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 TXNP10599 105 aaKnown RBP7.76□□□□□ -1.17
COPS4-209ENST00000511653 HSPD1P10809 573 aaKnown RBP7.76□□□□□ -1.17
COPS4-209ENST00000511653 POU3F3P20264 500 aaPredicted RBP7.76□□□□□ -1.17
COPS4-209ENST00000511653 CDC25BP30305 580 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 PDE1AP54750 535 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 NFRKBQ6P4R8 1299 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 CCDC62Q6P9F0 684 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 SLCO4C1Q6ZQN7 724 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 HERC6Q8IVU3 1022 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 WHAMMQ8TF30 809 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 TBC1D5Q92609 795 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 DHX38Q92620 1227 aaKnown RBP7.76□□□□□ -1.17
COPS4-209ENST00000511653 EVI5LQ96CN4 794 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 HELLSQ9NRZ9 838 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 TCP11L1Q9NUJ3 509 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 MYO15AQ9UKN7 3530 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 KAT6AQ92794 2004 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 RAD50Q92878 1312 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 SPTBN4Q9H254 2564 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 NKRFO15226 690 aaKnown RBP eCLIP7.76□□□□□ -1.17
COPS4-209ENST00000511653 MMP3P08254 477 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 ACTN1P12814 892 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 RFC2P35250 354 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 DEFB103AP81534 67 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 ARHGAP1Q07960 439 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 GRB10Q13322 594 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 PCSK7Q16549 785 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 ANKRD45Q5TZF3 282 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 TXNDC11Q6PKC3 985 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 GDPD5Q8WTR4 605 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 AFG1LQ8WV93 481 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 BSNDQ8WZ55 320 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 KAT2BQ92831 832 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 FTOQ9C0B1 505 aaKnown RBP eCLIP7.76□□□□□ -1.17
COPS4-209ENST00000511653 UBA5Q9GZZ9 404 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 ADAM19Q9H013 955 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 CAPN10Q9HC96 672 aa7.76□□□□□ -1.17
COPS4-209ENST00000511653 CCDC171Q6TFL3 1326 aa7.75□□□□□ -1.17
COPS4-209ENST00000511653 GMPRP36959 345 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms