RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 TCF25Q9BQ70 676 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 MXRA8Q9BRK3 442 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 OSBPL6Q9BZF3 934 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 GBP3Q9H0R5 595 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 CERS4Q9HA82 394 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 POLMQ9NP87 494 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 INCENPQ9NQS7 918 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 KCNH3Q9ULD8 1083 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 GIT1Q9Y2X7 761 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 MYH3P11055 1940 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 ESYT2A0FGR8 921 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 PPFIA3O75145 1194 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 DGAT1O75907 488 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 FAM13AO94988 1023 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 CXCL10P02778 98 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 SSBP05455 408 aaKnown RBP eCLIP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 CNPP09543 421 aaKnown RBP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 CYP2D6P10635 497 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 CPB1P15086 417 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 OR1G1P47890 313 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 CNTN2Q02246 1040 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 TAP1Q03518 808 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 CTDSPL2Q05D32 466 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 SPIRE1Q08AE8 756 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 NMIQ13287 307 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 UBXN2BQ14CS0 331 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 PTPN21Q16825 1174 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 ARHGAP29Q52LW3 1261 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 USP39Q53GS9 565 aaKnown RBP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 RARS2Q5T160 578 aaKnown RBP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 BROXQ5VW32 411 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 PLPP4Q5VZY2 271 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 KRT40Q6A162 431 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 PDZD4Q76G19 769 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 PGBD3Q8N328 593 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 MSANTD4Q8NCY6 345 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 NETO1Q8TDF5 533 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 TOP1MTQ969P6 601 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 PRIMPOLQ96LW4 560 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 TAAR1Q96RJ0 339 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 GAD1Q99259 594 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 UBA5Q9GZZ9 404 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 RSAD1Q9HA92 442 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 ZFP14Q9HCL3 533 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 ZBTB40Q9NUA8 1239 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 WNT16Q9UBV4 365 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 FBXO4Q9UKT5 387 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 MTCH2Q9Y6C9 303 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 ADAMTSL1Q8N6G6 1762 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 LAMB2P55268 1798 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 MYMKA6NI61 221 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 LDHAP00338 332 aaKnown RBP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 FGAP02671 866 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 KRT10P13645 584 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 IDEP14735 1019 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 PTPN2P17706 415 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 EIF4BP23588 611 aaKnown RBP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 FSHRP23945 695 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 KLRC1P26715 233 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 MARK3P27448 753 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 PDE4AP27815 886 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 PNPLA4P41247 253 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 QARSP47897 775 aaKnown RBP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 PSMC6P62333 389 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 GRSF1Q12849 480 aaKnown RBP eCLIP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 TRIM32Q13049 653 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 DMP1Q13316 513 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 PEX6Q13608 980 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 C9orf50Q5SZB4 431 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 HS2ST1Q7LGA3 356 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 SYCP3Q8IZU3 236 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 SYNPOQ8N3V7 929 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 SLC43A3Q8NBI5 491 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 RABGGTAQ92696 567 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 FBXL18Q96ME1 805 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 MTRQ99707 1265 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 MYL10Q9BUA6 226 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 NUSAP1Q9BXS6 441 aaKnown RBP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 RPF1Q9H9Y2 349 aaKnown RBP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 DISC1Q9NRI5 854 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 ANKEF1Q9NU02 776 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 PKD2L1Q9P0L9 805 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 SUCLA2Q9P2R7 463 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 CIZ1Q9ULV3 898 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 DNM3Q9UQ16 869 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 APOBEC2Q9Y235 224 aaKnown RBP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 PCDHB6Q9Y5E3 794 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 PCDHAC2Q9Y5I4 1007 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 LRRC37AA6NMS7 1700 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 DDX60LQ5H9U9 1706 aaKnown RBP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 UMODL1Q5DID0 1318 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 IGSF9BQ9UPX0 1349 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 KLF18A0A0U1RQI7 1052 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 LINC01553A4QN01 128 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 TRIM43BA6NCK2 446 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 ZNF233A6NK53 670 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 PI4K2BG5E9Z4 385 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 LAD1O00515 517 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 ZC3H11AO75152 810 aaKnown RBP eCLIP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 PHACTR2O75167 634 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms