RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 PADI6Q6TGC4 694 aa13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 KCNK18Q7Z418 384 aa13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 SRGAP1Q7Z6B7 1085 aa13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 AK8Q96MA6 479 aa13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 NLRP4Q96MN2 994 aa13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 PNMA5Q96PV4 448 aa13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 TGS1Q96RS0 853 aaKnown RBP13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 YME1L1Q96TA2 773 aa13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 NFKBIZQ9BYH8 718 aa13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 ELAC1Q9H777 363 aaKnown RBP13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 GPRC5CQ9NQ84 441 aa13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 DDX19AQ9NUU7 478 aaKnown RBP13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 TTC3P53804 2025 aa13.06□□□□□ -0.32
HMGXB3-203ENST00000510472 A0A0U1RQF3 1178 aa13.06□□□□□ -0.32
HMGXB3-203ENST00000510472 DENND3A2RUS2 1198 aa13.06□□□□□ -0.32
HMGXB3-203ENST00000510472 SLC26A4O43511 780 aa13.06□□□□□ -0.32
HMGXB3-203ENST00000510472 LPXNO60711 386 aa13.06□□□□□ -0.32
HMGXB3-203ENST00000510472 USO1O60763 962 aaKnown RBP13.06□□□□□ -0.32
HMGXB3-203ENST00000510472 EYA4O95677 639 aa13.06□□□□□ -0.32
HMGXB3-203ENST00000510472 STAG3L1P0CL83 205 aa13.06□□□□□ -0.32
HMGXB3-203ENST00000510472 HOXA11P31270 313 aaPredicted RBP13.06□□□□□ -0.32
HMGXB3-203ENST00000510472 GRB10Q13322 594 aa13.06□□□□□ -0.32
HMGXB3-203ENST00000510472 CAPSQ13938 189 aa13.06□□□□□ -0.32
HMGXB3-203ENST00000510472 ZNF598Q86UK7 904 aaKnown RBP13.06□□□□□ -0.32
HMGXB3-203ENST00000510472 RNF149Q8NC42 400 aa13.06□□□□□ -0.32
HMGXB3-203ENST00000510472 MCPH1Q8NEM0 835 aa13.06□□□□□ -0.32
HMGXB3-203ENST00000510472 CLP1Q92989 425 aaKnown RBP13.06□□□□□ -0.32
HMGXB3-203ENST00000510472 SCLT1Q96NL6 688 aa13.06□□□□□ -0.32
HMGXB3-203ENST00000510472 BHMT2Q9H2M3 363 aa13.06□□□□□ -0.32
HMGXB3-203ENST00000510472 CERS4Q9HA82 394 aa13.06□□□□□ -0.32
HMGXB3-203ENST00000510472 RNF19AQ9NV58 838 aa13.06□□□□□ -0.32
HMGXB3-203ENST00000510472 TMEM161AQ9NX61 479 aa13.06□□□□□ -0.32
HMGXB3-203ENST00000510472 PTPRSQ13332 1948 aa13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 MICAL3Q7RTP6 2002 aa13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 ARHGEF35A5YM69 484 aa13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 E9PMD0 336 aa13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 RFXAPO00287 272 aa13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 SFPQP23246 707 aaKnown RBP eCLIP13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 LONP1P36776 959 aaKnown RBP13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 SLC39A14Q15043 492 aa13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 PCBP1Q15365 356 aaKnown RBP eCLIP13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 AMHR2Q16671 573 aa13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 TMEM119Q4V9L6 283 aa13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 C1orf186Q6ZWK4 172 aa13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 ECHDC2Q86YB7 292 aa13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 ARNTL2Q8WYA1 636 aa13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 USP28Q96RU2 1077 aa13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 C17orf80Q9BSJ5 609 aa13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 POLR3FQ9H1D9 316 aaPredicted RBP13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 FBXO2Q9UK22 296 aaPredicted RBP13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 DNM3Q9UQ16 869 aa13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 PCDHB7Q9Y5E2 793 aa13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 ADGRA3Q8IWK6 1321 aa13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 COL4A6Q14031 1691 aa13.05□□□□□ -0.32
HMGXB3-203ENST00000510472 C5orf67F2Z3F1 127 aa13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 ZNF623O75123 536 aa13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 EOMESO95936 686 aa13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 ZSCAN20P17040 1043 aaPredicted RBP13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 ATF7P17544 494 aaPredicted RBP13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 NASPP49321 788 aaPredicted RBP13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 GATMP50440 423 aa13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 MBTD1Q05BQ5 628 aa13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 PKP1Q13835 747 aa13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 TFDP1Q14186 410 aa13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 FAM102BQ5T8I3 360 aa13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 CDCA2Q69YH5 1023 aaPredicted RBP13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 CMTR2Q8IYT2 770 aaKnown RBP13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 DAW1Q8N136 415 aa13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 LRRC15Q8TF66 581 aa13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 BSNDQ8WZ55 320 aa13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 SAMD11Q96NU1 681 aa13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 CCSER1Q9C0I3 900 aa13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 AGPAT5Q9NUQ2 364 aa13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 RNF216Q9NWF9 866 aaPredicted RBP13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 DACT1Q9NYF0 836 aa13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 SRPRBQ9Y5M8 271 aaKnown RBP13.04□□□□□ -0.32
HMGXB3-203ENST00000510472 ZSCAN22P10073 491 aaPredicted RBP13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 FOSL2P15408 326 aa13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 MARCKSP29966 332 aaPredicted RBP13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 BMPR1AP36894 532 aa13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 PHKA2P46019 1235 aa13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 EPC2Q52LR7 807 aa13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 UBXN11Q5T124 520 aa13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 RINT1Q6NUQ1 792 aa13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 USP49Q70CQ1 688 aa13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 MAEAQ7L5Y9 396 aa13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 CATSPER4Q7RTX7 472 aa13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 MRPL10Q7Z7H8 261 aaKnown RBP13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 CABP7Q86V35 215 aa13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 TMEM192Q8IY95 271 aa13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 FIBCD1Q8N539 461 aa13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 SYT2Q8N9I0 419 aaPredicted RBP13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 LINC00301Q8NCQ3 95 aa13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 CCDC43Q96MW1 224 aaKnown RBP13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 CASD1Q96PB1 797 aa13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 GAS2L1Q99501 681 aaPredicted RBP13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 RUSC1Q9BVN2 902 aa13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 NT5C3AQ9H0P0 336 aa13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 CSRNP2Q9H175 543 aa13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 FZD8Q9H461 694 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms