RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 MAP7D2Q96T17 732 aa17.96■□□□□ 0.47
RAB40C-202ENST00000509637 FDXACB1Q9BRP7 624 aaPredicted RBP17.96■□□□□ 0.47
RAB40C-202ENST00000509637 NIFKQ9BYG3 293 aaKnown RBP17.96■□□□□ 0.47
RAB40C-202ENST00000509637 ENTPD7Q9NQZ7 604 aa17.96■□□□□ 0.47
RAB40C-202ENST00000509637 NRBP2Q9NSY0 501 aa17.96■□□□□ 0.47
RAB40C-202ENST00000509637 FAM86C1Q9NVL1 165 aa17.96■□□□□ 0.47
RAB40C-202ENST00000509637 CEP131Q9UPN4 1083 aa17.96■□□□□ 0.47
RAB40C-202ENST00000509637 C2CD4DB7Z1M9 353 aa17.95■□□□□ 0.46
RAB40C-202ENST00000509637 ZSCAN20P17040 1043 aaPredicted RBP17.95■□□□□ 0.46
RAB40C-202ENST00000509637 PTPN21Q16825 1174 aa17.95■□□□□ 0.46
RAB40C-202ENST00000509637 MTERF2Q49AM1 385 aa17.95■□□□□ 0.46
RAB40C-202ENST00000509637 LRCH2Q5VUJ6 765 aa17.95■□□□□ 0.46
RAB40C-202ENST00000509637 MCTP2Q6DN12 878 aa17.95■□□□□ 0.46
RAB40C-202ENST00000509637 TMC7Q7Z402 723 aa17.95■□□□□ 0.46
RAB40C-202ENST00000509637 LRRC43Q8N309 656 aa17.95■□□□□ 0.46
RAB40C-202ENST00000509637 ETNPPLQ8TBG4 499 aa17.95■□□□□ 0.46
RAB40C-202ENST00000509637 NRDE2Q9H7Z3 1164 aa17.95■□□□□ 0.46
RAB40C-202ENST00000509637 NGRNQ9NPE2 291 aaKnown RBP17.95■□□□□ 0.46
RAB40C-202ENST00000509637 WRAP73Q9P2S5 460 aaPredicted RBP17.95■□□□□ 0.46
RAB40C-202ENST00000509637 CACNA1HO95180 2353 aa17.94■□□□□ 0.46
RAB40C-202ENST00000509637 CYP3A7-CYP3A51PA0A087WV96 503 aa17.94■□□□□ 0.46
RAB40C-202ENST00000509637 GAS7O60861 476 aa17.94■□□□□ 0.46
RAB40C-202ENST00000509637 CYP3A7P24462 503 aa17.94■□□□□ 0.46
RAB40C-202ENST00000509637 AVPR2P30518 371 aa17.94■□□□□ 0.46
RAB40C-202ENST00000509637 FGD1P98174 961 aa17.94■□□□□ 0.46
RAB40C-202ENST00000509637 Q4G0T1 1027 aa17.94■□□□□ 0.46
RAB40C-202ENST00000509637 ANO5Q75V66 913 aa17.94■□□□□ 0.46
RAB40C-202ENST00000509637 CCDC12Q8WUD4 166 aaPredicted RBP17.94■□□□□ 0.46
RAB40C-202ENST00000509637 SLC22A17Q8WUG5 538 aa17.94■□□□□ 0.46
RAB40C-202ENST00000509637 TEKT3Q9BXF9 490 aa17.94■□□□□ 0.46
RAB40C-202ENST00000509637 PUF60Q9UHX1 559 aaKnown RBP17.94■□□□□ 0.46
RAB40C-202ENST00000509637 SLC37A4O43826 429 aa17.93■□□□□ 0.46
RAB40C-202ENST00000509637 BRD1O95696 1058 aa17.93■□□□□ 0.46
RAB40C-202ENST00000509637 CXCL14O95715 111 aa17.93■□□□□ 0.46
RAB40C-202ENST00000509637 EOMESO95936 686 aa17.93■□□□□ 0.46
RAB40C-202ENST00000509637 EPCAMP16422 314 aa17.93■□□□□ 0.46
RAB40C-202ENST00000509637 TMOD1P28289 359 aa17.93■□□□□ 0.46
RAB40C-202ENST00000509637 PHKA2P46019 1235 aa17.93■□□□□ 0.46
RAB40C-202ENST00000509637 TBC1D8BQ0IIM8 1120 aa17.93■□□□□ 0.46
RAB40C-202ENST00000509637 PLA2G4FQ68DD2 849 aa17.93■□□□□ 0.46
RAB40C-202ENST00000509637 MIER3Q7Z3K6 550 aa17.93■□□□□ 0.46
RAB40C-202ENST00000509637 NLRP7Q8WX94 980 aa17.93■□□□□ 0.46
RAB40C-202ENST00000509637 ZBP1Q9H171 429 aa17.93■□□□□ 0.46
RAB40C-202ENST00000509637 GJB4Q9NTQ9 266 aa17.93■□□□□ 0.46
RAB40C-202ENST00000509637 DNAJB4Q9UDY4 337 aa17.93■□□□□ 0.46
RAB40C-202ENST00000509637 HOXA2O43364 376 aa17.92■□□□□ 0.46
RAB40C-202ENST00000509637 OFD1O75665 1012 aa17.92■□□□□ 0.46
RAB40C-202ENST00000509637 GALTP07902 379 aa17.92■□□□□ 0.46
RAB40C-202ENST00000509637 JAK3P52333 1124 aa17.92■□□□□ 0.46
RAB40C-202ENST00000509637 NPEPPSP55786 919 aa17.92■□□□□ 0.46
RAB40C-202ENST00000509637 NLRP5P59047 1200 aa17.92■□□□□ 0.46
RAB40C-202ENST00000509637 ZNF280BQ86YH2 543 aa17.92■□□□□ 0.46
RAB40C-202ENST00000509637 VPS52Q8N1B4 723 aa17.92■□□□□ 0.46
RAB40C-202ENST00000509637 TRAIPQ9BWF2 469 aa17.92■□□□□ 0.46
RAB40C-202ENST00000509637 ADAM7Q9H2U9 754 aa17.92■□□□□ 0.46
RAB40C-202ENST00000509637 MINDY3Q9H8M7 445 aa17.92■□□□□ 0.46
RAB40C-202ENST00000509637 IFT122Q9HBG6 1241 aa17.92■□□□□ 0.46
RAB40C-202ENST00000509637 SH3GLB2Q9NR46 395 aa17.92■□□□□ 0.46
RAB40C-202ENST00000509637 TBC1D13Q9NVG8 400 aa17.92■□□□□ 0.46
RAB40C-202ENST00000509637 RNF216Q9NWF9 866 aaPredicted RBP17.92■□□□□ 0.46
RAB40C-202ENST00000509637 SEPT9Q9UHD8 586 aaPredicted RBP17.92■□□□□ 0.46
RAB40C-202ENST00000509637 PCDHA4Q9UN74 947 aa17.92■□□□□ 0.46
RAB40C-202ENST00000509637 PLXNA3P51805 1871 aa17.91■□□□□ 0.46
RAB40C-202ENST00000509637 MAFO75444 373 aaPredicted RBP17.91■□□□□ 0.46
RAB40C-202ENST00000509637 DDHD2O94830 711 aa17.91■□□□□ 0.46
RAB40C-202ENST00000509637 ASGR2P07307 311 aa17.91■□□□□ 0.46
RAB40C-202ENST00000509637 HOXB8P17481 243 aaPredicted RBP17.91■□□□□ 0.46
RAB40C-202ENST00000509637 SFNP31947 248 aa17.91■□□□□ 0.46
RAB40C-202ENST00000509637 PPM1AP35813 382 aa17.91■□□□□ 0.46
RAB40C-202ENST00000509637 SLC11A1P49279 550 aa17.91■□□□□ 0.46
RAB40C-202ENST00000509637 KRT17Q04695 432 aa17.91■□□□□ 0.46
RAB40C-202ENST00000509637 SMC1AQ14683 1233 aaKnown RBP17.91■□□□□ 0.46
RAB40C-202ENST00000509637 XKR3Q5GH77 459 aa17.91■□□□□ 0.46
RAB40C-202ENST00000509637 AGMOQ6ZNB7 445 aa17.91■□□□□ 0.46
RAB40C-202ENST00000509637 ABI1Q8IZP0 508 aa17.91■□□□□ 0.46
RAB40C-202ENST00000509637 KREMEN2Q8NCW0 462 aa17.91■□□□□ 0.46
RAB40C-202ENST00000509637 BICD2Q8TD16 824 aa17.91■□□□□ 0.46
RAB40C-202ENST00000509637 RIPOR3Q96MK2 946 aa17.91■□□□□ 0.46
RAB40C-202ENST00000509637 ZSWIM6Q9HCJ5 1215 aa17.91■□□□□ 0.46
RAB40C-202ENST00000509637 SUCLA2Q9P2R7 463 aaPredicted RBP17.91■□□□□ 0.46
RAB40C-202ENST00000509637 KCNJ14Q9UNX9 436 aa17.91■□□□□ 0.46
RAB40C-202ENST00000509637 DDX11L8A8MPP1 907 aa17.9■□□□□ 0.46
RAB40C-202ENST00000509637 ZBTB39O15060 712 aa17.9■□□□□ 0.46
RAB40C-202ENST00000509637 AKAP17AQ02040 695 aaKnown RBP17.9■□□□□ 0.46
RAB40C-202ENST00000509637 EARS2Q5JPH6 523 aaKnown RBP17.9■□□□□ 0.46
RAB40C-202ENST00000509637 UBXN11Q5T124 520 aa17.9■□□□□ 0.46
RAB40C-202ENST00000509637 RARS2Q5T160 578 aaKnown RBP17.9■□□□□ 0.46
RAB40C-202ENST00000509637 RUFY3Q7L099 469 aa17.9■□□□□ 0.46
RAB40C-202ENST00000509637 BLIDQ8IZY5 108 aa17.9■□□□□ 0.46
RAB40C-202ENST00000509637 CCDC148Q8NFR7 591 aa17.9■□□□□ 0.46
RAB40C-202ENST00000509637 CASP10Q92851 521 aa17.9■□□□□ 0.46
RAB40C-202ENST00000509637 IGSF21Q96ID5 467 aa17.9■□□□□ 0.46
RAB40C-202ENST00000509637 GCOM2Q9BZD3 368 aaPredicted RBP17.9■□□□□ 0.46
RAB40C-202ENST00000509637 TCEAL9Q9UHQ7 104 aa17.9■□□□□ 0.46
RAB40C-202ENST00000509637 VAV3Q9UKW4 847 aa17.9■□□□□ 0.46
RAB40C-202ENST00000509637 LILRB3O75022 631 aa17.89■□□□□ 0.45
RAB40C-202ENST00000509637 ZNF623O75123 536 aa17.89■□□□□ 0.45
RAB40C-202ENST00000509637 ZC3H11AO75152 810 aaKnown RBP eCLIP17.89■□□□□ 0.45
RAB40C-202ENST00000509637 CTSAP10619 480 aa17.89■□□□□ 0.45
RAB40C-202ENST00000509637 HOXA11P31270 313 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms