RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 U2AF2P26368 475 aaKnown RBP eCLIP16.38■□□□□ 0.21
HMGCL-208ENST00000509389 GPC3P51654 580 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 NPY5RQ15761 445 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 THNSL1Q8IYQ7 743 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 BLIDQ8IZY5 108 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 ZNF710Q8N1W2 664 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 MICAL1Q8TDZ2 1067 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 POP1Q99575 1024 aaKnown RBP16.38■□□□□ 0.21
HMGCL-208ENST00000509389 PHF20Q9BVI0 1012 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 TLR9Q9NR96 1032 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 GJB4Q9NTQ9 266 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 RNF19AQ9NV58 838 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 CYP3A7-CYP3A51PA0A087WV96 503 aa16.37■□□□□ 0.21
HMGCL-208ENST00000509389 DDX11L8A8MPP1 907 aa16.37■□□□□ 0.21
HMGCL-208ENST00000509389 M0R2N6 131 aa16.37■□□□□ 0.21
HMGCL-208ENST00000509389 ZSCAN20P17040 1043 aaPredicted RBP16.37■□□□□ 0.21
HMGCL-208ENST00000509389 LAG3P18627 525 aa16.37■□□□□ 0.21
HMGCL-208ENST00000509389 CYP3A7P24462 503 aa16.37■□□□□ 0.21
HMGCL-208ENST00000509389 ERVFC1P60507 584 aa16.37■□□□□ 0.21
HMGCL-208ENST00000509389 COASYQ13057 564 aa16.37■□□□□ 0.21
HMGCL-208ENST00000509389 TARBP2Q15633 366 aaKnown RBP16.37■□□□□ 0.21
HMGCL-208ENST00000509389 CSPP1Q1MSJ5 1256 aa16.37■□□□□ 0.21
HMGCL-208ENST00000509389 LRRC55Q6ZSA7 311 aa16.37■□□□□ 0.21
HMGCL-208ENST00000509389 MIER3Q7Z3K6 550 aa16.37■□□□□ 0.21
HMGCL-208ENST00000509389 BRAPQ7Z569 592 aa16.37■□□□□ 0.21
HMGCL-208ENST00000509389 RDM1Q8NG50 284 aa16.37■□□□□ 0.21
HMGCL-208ENST00000509389 CASD1Q96PB1 797 aa16.37■□□□□ 0.21
HMGCL-208ENST00000509389 TMEM117Q9H0C3 514 aa16.37■□□□□ 0.21
HMGCL-208ENST00000509389 TLE6Q9H808 572 aa16.37■□□□□ 0.21
HMGCL-208ENST00000509389 BARX2Q9UMQ3 279 aaPredicted RBP16.37■□□□□ 0.21
HMGCL-208ENST00000509389 FSCN2O14926 492 aa16.36■□□□□ 0.21
HMGCL-208ENST00000509389 PER2O15055 1255 aa16.36■□□□□ 0.21
HMGCL-208ENST00000509389 HOXA2O43364 376 aa16.36■□□□□ 0.21
HMGCL-208ENST00000509389 STBD1O95210 358 aa16.36■□□□□ 0.21
HMGCL-208ENST00000509389 DARSP14868 501 aaKnown RBP16.36■□□□□ 0.21
HMGCL-208ENST00000509389 TBC1D8BQ0IIM8 1120 aa16.36■□□□□ 0.21
HMGCL-208ENST00000509389 B3GNT9Q6UX72 402 aa16.36■□□□□ 0.21
HMGCL-208ENST00000509389 FERMT3Q86UX7 667 aa16.36■□□□□ 0.21
HMGCL-208ENST00000509389 ECHDC2Q86YB7 292 aa16.36■□□□□ 0.21
HMGCL-208ENST00000509389 DAGLBQ8NCG7 672 aa16.36■□□□□ 0.21
HMGCL-208ENST00000509389 SMRP1Q8NCR6 262 aa16.36■□□□□ 0.21
HMGCL-208ENST00000509389 MBOAT7Q96N66 472 aa16.36■□□□□ 0.21
HMGCL-208ENST00000509389 NIFKQ9BYG3 293 aaKnown RBP16.36■□□□□ 0.21
HMGCL-208ENST00000509389 MUC6Q6W4X9 2439 aa16.36■□□□□ 0.21
HMGCL-208ENST00000509389 FGFR4P22455 802 aa16.35■□□□□ 0.21
HMGCL-208ENST00000509389 RBM10P98175 930 aaKnown RBP16.35■□□□□ 0.21
HMGCL-208ENST00000509389 PLCB3Q01970 1234 aa16.35■□□□□ 0.21
HMGCL-208ENST00000509389 DRP2Q13474 957 aa16.35■□□□□ 0.21
HMGCL-208ENST00000509389 MTERF2Q49AM1 385 aa16.35■□□□□ 0.21
HMGCL-208ENST00000509389 XKR3Q5GH77 459 aa16.35■□□□□ 0.21
HMGCL-208ENST00000509389 FOXD4L5Q5VV16 416 aaPredicted RBP16.35■□□□□ 0.21
HMGCL-208ENST00000509389 ATL3Q6DD88 541 aa16.35■□□□□ 0.21
HMGCL-208ENST00000509389 RNF135Q8IUD6 432 aa16.35■□□□□ 0.21
HMGCL-208ENST00000509389 VN1R2Q8NFZ6 395 aa16.35■□□□□ 0.21
HMGCL-208ENST00000509389 ETNPPLQ8TBG4 499 aa16.35■□□□□ 0.21
HMGCL-208ENST00000509389 NLRP7Q8WX94 980 aa16.35■□□□□ 0.21
HMGCL-208ENST00000509389 FOXD4L4Q8WXT5 416 aaPredicted RBP16.35■□□□□ 0.21
HMGCL-208ENST00000509389 TNFRSF25Q93038 417 aa16.35■□□□□ 0.21
HMGCL-208ENST00000509389 SCLT1Q96NL6 688 aa16.35■□□□□ 0.21
HMGCL-208ENST00000509389 CEP89Q96ST8 783 aa16.35■□□□□ 0.21
HMGCL-208ENST00000509389 FOXP1Q9H334 677 aaPredicted RBP16.35■□□□□ 0.21
HMGCL-208ENST00000509389 SEPT9Q9UHD8 586 aaPredicted RBP16.35■□□□□ 0.21
HMGCL-208ENST00000509389 MUTYHQ9UIF7 546 aa16.35■□□□□ 0.21
HMGCL-208ENST00000509389 TMEM150BA6NC51 233 aa16.34■□□□□ 0.21
HMGCL-208ENST00000509389 PTMSP20962 102 aa16.34■□□□□ 0.21
HMGCL-208ENST00000509389 GUCY1B3Q02153 619 aa16.34■□□□□ 0.21
HMGCL-208ENST00000509389 NONOQ15233 471 aaKnown RBP eCLIP16.34■□□□□ 0.21
HMGCL-208ENST00000509389 DUSP6Q16828 381 aa16.34■□□□□ 0.21
HMGCL-208ENST00000509389 GALNT17Q6IS24 598 aa16.34■□□□□ 0.21
HMGCL-208ENST00000509389 PDE12Q6L8Q7 609 aaKnown RBP16.34■□□□□ 0.21
HMGCL-208ENST00000509389 KCNT2Q6UVM3 1135 aa16.34■□□□□ 0.21
HMGCL-208ENST00000509389 MOXD1Q6UVY6 613 aa16.34■□□□□ 0.21
HMGCL-208ENST00000509389 ABI1Q8IZP0 508 aa16.34■□□□□ 0.21
HMGCL-208ENST00000509389 RNF169Q8NCN4 708 aa16.34■□□□□ 0.21
HMGCL-208ENST00000509389 MRPS27Q92552 414 aaKnown RBP16.34■□□□□ 0.21
HMGCL-208ENST00000509389 CHAMP1Q96JM3 812 aa16.34■□□□□ 0.21
HMGCL-208ENST00000509389 SH2D3AQ9BRG2 576 aa16.34■□□□□ 0.21
HMGCL-208ENST00000509389 LZTS1Q9Y250 596 aa16.34■□□□□ 0.21
HMGCL-208ENST00000509389 USP15Q9Y4E8 981 aaPredicted RBP16.34■□□□□ 0.21
HMGCL-208ENST00000509389 IGKV6-21A0A0C4DH24 114 aa16.33■□□□□ 0.2
HMGCL-208ENST00000509389 A0A0U1RQF3 1178 aa16.33■□□□□ 0.2
HMGCL-208ENST00000509389 CSDE1O75534 798 aaKnown RBP16.33■□□□□ 0.2
HMGCL-208ENST00000509389 XBP1P17861 261 aa16.33■□□□□ 0.2
HMGCL-208ENST00000509389 PBX3P40426 434 aa16.33■□□□□ 0.2
HMGCL-208ENST00000509389 DNM1Q05193 864 aaKnown RBP16.33■□□□□ 0.2
HMGCL-208ENST00000509389 TRIM29Q14134 588 aa16.33■□□□□ 0.2
HMGCL-208ENST00000509389 INF2Q27J81 1249 aa16.33■□□□□ 0.2
HMGCL-208ENST00000509389 HERC4Q5GLZ8 1057 aaPredicted RBP16.33■□□□□ 0.2
HMGCL-208ENST00000509389 CLLU1OSQ5K130 101 aa16.33■□□□□ 0.2
HMGCL-208ENST00000509389 PLPP4Q5VZY2 271 aa16.33■□□□□ 0.2
HMGCL-208ENST00000509389 ZNF598Q86UK7 904 aaKnown RBP16.33■□□□□ 0.2
HMGCL-208ENST00000509389 LRRC43Q8N309 656 aa16.33■□□□□ 0.2
HMGCL-208ENST00000509389 ZNF558Q96NG5 402 aa16.33■□□□□ 0.2
HMGCL-208ENST00000509389 CDCA3Q99618 268 aaPredicted RBP16.33■□□□□ 0.2
HMGCL-208ENST00000509389 LMBRD1Q9NUN5 540 aa16.33■□□□□ 0.2
HMGCL-208ENST00000509389 DDX25Q9UHL0 483 aaKnown RBP16.33■□□□□ 0.2
HMGCL-208ENST00000509389 PUF60Q9UHX1 559 aaKnown RBP16.33■□□□□ 0.2
HMGCL-208ENST00000509389 KCNJ14Q9UNX9 436 aa16.33■□□□□ 0.2
HMGCL-208ENST00000509389 EOMESO95936 686 aa16.32■□□□□ 0.2
HMGCL-208ENST00000509389 ATF7P17544 494 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms