RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 SFXN1Q9H9B4 322 aa4.47□□□□□ -1.69
RNF4-211ENST00000509206 PIDD1Q9HB75 910 aa4.47□□□□□ -1.69
RNF4-211ENST00000509206 IL1RAPL2Q9NP60 686 aa4.47□□□□□ -1.69
RNF4-211ENST00000509206 TOMM22Q9NS69 142 aa4.47□□□□□ -1.69
RNF4-211ENST00000509206 C1orf112Q9NSG2 853 aa4.47□□□□□ -1.69
RNF4-211ENST00000509206 DPP7Q9UHL4 492 aa4.47□□□□□ -1.69
RNF4-211ENST00000509206 PADI3Q9ULW8 664 aa4.47□□□□□ -1.69
RNF4-211ENST00000509206 GINS2Q9Y248 185 aa4.47□□□□□ -1.69
RNF4-211ENST00000509206 MRPS17Q9Y2R5 130 aaKnown RBP4.47□□□□□ -1.69
RNF4-211ENST00000509206 MRPL11Q9Y3B7 192 aaKnown RBP4.47□□□□□ -1.69
RNF4-211ENST00000509206 CNOT1A5YKK6 2376 aaKnown RBP4.47□□□□□ -1.69
RNF4-211ENST00000509206 ABCB11O95342 1321 aa4.46□□□□□ -1.69
RNF4-211ENST00000509206 CACNA1IQ9P0X4 2223 aa4.46□□□□□ -1.69
RNF4-211ENST00000509206 MYO5AQ9Y4I1 1855 aaKnown RBP4.46□□□□□ -1.7
RNF4-211ENST00000509206 LILRB5O75023 590 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 CFBP00751 764 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 TGFB3P10600 412 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 HOXD8P13378 290 aaPredicted RBP4.46□□□□□ -1.7
RNF4-211ENST00000509206 GLULP15104 373 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 GNAT2P19087 354 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 SPINK2P20155 84 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 RDXP35241 583 aaKnown RBP4.46□□□□□ -1.7
RNF4-211ENST00000509206 NOVA1P51513 510 aaKnown RBP4.46□□□□□ -1.7
RNF4-211ENST00000509206 PFKPQ01813 784 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 SP4Q02446 784 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 PRKCQQ04759 706 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 TMEM62Q0P6H9 643 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 C19orf57Q0VDD7 668 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 ELOAQ14241 798 aaKnown RBP4.46□□□□□ -1.7
RNF4-211ENST00000509206 MLF2Q15773 248 aaPredicted RBP4.46□□□□□ -1.7
RNF4-211ENST00000509206 GRIK4Q16099 956 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 GNPTABQ3T906 1256 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 SLC44A4Q53GD3 710 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 STPG1Q5TH74 334 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 PSAPL1Q6NUJ1 521 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 BTNL9Q6UXG8 535 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 SLC24A5Q71RS6 500 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 CYFIP1Q7L576 1253 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 PDZD3Q86UT5 571 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 FAM9BQ8IZU0 186 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 VPS52Q8N1B4 723 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 DEPDC4Q8N2C3 294 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 RNF169Q8NCN4 708 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 SSH3Q8TE77 659 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 LMBR1Q8WVP7 490 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 LINC01599Q8WXQ3 324 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 TBC1D5Q92609 795 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 FRAT1Q92837 279 aaPredicted RBP4.46□□□□□ -1.7
RNF4-211ENST00000509206 PHKBQ93100 1093 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 STRBPQ96SI9 672 aaKnown RBP4.46□□□□□ -1.7
RNF4-211ENST00000509206 ADAM2Q99965 735 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 MKNK1Q9BUB5 465 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 EMILIN2Q9BXX0 1053 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 OSBPL6Q9BZF3 934 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 MAF1Q9H063 256 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 TMEM117Q9H0C3 514 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 PUS7LQ9H0K6 701 aaKnown RBP4.46□□□□□ -1.7
RNF4-211ENST00000509206 GZF1Q9H116 711 aaPredicted RBP4.46□□□□□ -1.7
RNF4-211ENST00000509206 BCAS3Q9H6U6 928 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 AGO3Q9H9G7 860 aaKnown RBP4.46□□□□□ -1.7
RNF4-211ENST00000509206 DACH1Q9UI36 760 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 TUBE1Q9UJT0 475 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 NOP58Q9Y2X3 529 aaKnown RBP4.46□□□□□ -1.7
RNF4-211ENST00000509206 SUPT16HQ9Y5B9 1047 aaKnown RBP4.46□□□□□ -1.7
RNF4-211ENST00000509206 PCDHA1Q9Y5I3 950 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 TRPV2Q9Y5S1 764 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 SQORQ9Y6N5 450 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 ZBED9Q6R2W3 1325 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 WDR19Q8NEZ3 1342 aa4.46□□□□□ -1.7
RNF4-211ENST00000509206 TTC3P53804 2025 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 MYH7BA7E2Y1 1941 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 CCDC195A0A1B0GUA6 201 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 GSG1L2A8MUP6 293 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 AXIN1O15169 862 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 GPR182O15218 404 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 RPS6KA5O75582 802 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 FGFR1P11362 822 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 TOP1P11387 765 aaKnown RBP4.45□□□□□ -1.7
RNF4-211ENST00000509206 ZSCAN20P17040 1043 aaPredicted RBP4.45□□□□□ -1.7
RNF4-211ENST00000509206 NCLP19338 710 aaKnown RBP4.45□□□□□ -1.7
RNF4-211ENST00000509206 UBA1P22314 1058 aaKnown RBP4.45□□□□□ -1.7
RNF4-211ENST00000509206 CCND2P30279 289 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 HOXC8P31273 242 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 PBX3P40426 434 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 SLC19A1P41440 591 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 METAP2P50579 478 aaKnown RBP eCLIP4.45□□□□□ -1.7
RNF4-211ENST00000509206 LIMK1P53667 647 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 GPC5P78333 572 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 KRT76Q01546 638 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 MGAT3Q09327 533 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 ZNF252P-AS1Q0IIN9 211 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 NCOA4Q13772 614 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 TMEM266Q2M3C6 531 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 CCDC184Q52MB2 194 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 TMCO4Q5TGY1 634 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 DAB2IPQ5VWQ8 1189 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 RNF43Q68DV7 783 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 RSPO2Q6UXX9 243 aaPredicted RBP4.45□□□□□ -1.7
RNF4-211ENST00000509206 C15orf39Q6ZRI6 1047 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 FAM43BQ6ZT52 329 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms