RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 GTF2F1P35269 517 aaKnown RBP eCLIP9.68□□□□□ -0.86
SNCA-211ENST00000508895 ANP32AP39687 249 aaKnown RBP9.68□□□□□ -0.86
SNCA-211ENST00000508895 PBX3P40426 434 aa9.68□□□□□ -0.86
SNCA-211ENST00000508895 SARSP49591 514 aaKnown RBP9.68□□□□□ -0.86
SNCA-211ENST00000508895 KCNQ1P51787 676 aa9.68□□□□□ -0.86
SNCA-211ENST00000508895 ATP2C1P98194 919 aaPredicted RBP9.68□□□□□ -0.86
SNCA-211ENST00000508895 PTGDRQ13258 359 aa9.68□□□□□ -0.86
SNCA-211ENST00000508895 LONRF3Q496Y0 759 aa9.68□□□□□ -0.86
SNCA-211ENST00000508895 CLLU1OSQ5K130 101 aa9.68□□□□□ -0.86
SNCA-211ENST00000508895 FOXD4L5Q5VV16 416 aaPredicted RBP9.68□□□□□ -0.86
SNCA-211ENST00000508895 ZNF598Q86UK7 904 aaKnown RBP9.68□□□□□ -0.86
SNCA-211ENST00000508895 CATSPER3Q86XQ3 398 aa9.68□□□□□ -0.86
SNCA-211ENST00000508895 RHPN2Q8IUC4 686 aa9.68□□□□□ -0.86
SNCA-211ENST00000508895 NPAS4Q8IUM7 802 aa9.68□□□□□ -0.86
SNCA-211ENST00000508895 PRPF31Q8WWY3 499 aaKnown RBP9.68□□□□□ -0.86
SNCA-211ENST00000508895 FOXD4L4Q8WXT5 416 aaPredicted RBP9.68□□□□□ -0.86
SNCA-211ENST00000508895 CLP1Q92989 425 aaKnown RBP9.68□□□□□ -0.86
SNCA-211ENST00000508895 CEP170P1Q96L14 293 aa9.68□□□□□ -0.86
SNCA-211ENST00000508895 CWH43Q9H720 699 aa9.68□□□□□ -0.86
SNCA-211ENST00000508895 GPRC5CQ9NQ84 441 aa9.68□□□□□ -0.86
SNCA-211ENST00000508895 PCDHA12Q9UN75 941 aa9.68□□□□□ -0.86
SNCA-211ENST00000508895 USP20Q9Y2K6 914 aa9.68□□□□□ -0.86
SNCA-211ENST00000508895 ZDHHC9Q9Y397 364 aa9.68□□□□□ -0.86
SNCA-211ENST00000508895 PDCD11Q14690 1871 aaKnown RBP9.68□□□□□ -0.86
SNCA-211ENST00000508895 TTLL13PA6NNM8 815 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 H3BNC9 293 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 BRD1O95696 1058 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 EDN1P05305 212 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 ITGB1P05556 798 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 EIF4BP23588 611 aaKnown RBP9.67□□□□□ -0.86
SNCA-211ENST00000508895 CTNNB1P35222 781 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 IRS1P35568 1242 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 BMPR1AP36894 532 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 TECP42680 631 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 AFF1P51825 1210 aaKnown RBP9.67□□□□□ -0.86
SNCA-211ENST00000508895 GPM6BQ13491 265 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 EMC2Q15006 297 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 XKR9Q5GH70 373 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 UBXN11Q5T124 520 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 POTEGQ6S5H5 508 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 KCNK18Q7Z418 384 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 ECHDC2Q86YB7 292 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 FIBCD1Q8N539 461 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 LRRC15Q8TF66 581 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 NLRP7Q8WX94 980 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 BSNDQ8WZ55 320 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 TNPO1Q92973 898 aaKnown RBP9.67□□□□□ -0.86
SNCA-211ENST00000508895 LPPQ93052 612 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 NLRP4Q96MN2 994 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 CASD1Q96PB1 797 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 MAP7D2Q96T17 732 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 MMTAG2Q9BU76 263 aaKnown RBP9.67□□□□□ -0.86
SNCA-211ENST00000508895 ZSCAN16Q9H4T2 348 aaPredicted RBP9.67□□□□□ -0.86
SNCA-211ENST00000508895 ALG13Q9NP73 1137 aaKnown RBP9.67□□□□□ -0.86
SNCA-211ENST00000508895 CEP131Q9UPN4 1083 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 MUC6Q6W4X9 2439 aa9.67□□□□□ -0.86
SNCA-211ENST00000508895 CITO14578 2027 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 TBKBP1A7MCY6 615 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 C5orf67F2Z3F1 127 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 LAD1O00515 517 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 GPR182O15218 404 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 MARCH6O60337 910 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 LYPLA2O95372 231 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 BAG4O95429 457 aaKnown RBP9.66□□□□□ -0.86
SNCA-211ENST00000508895 SRGAP2CP0DJJ0 459 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 HOXA11P31270 313 aaPredicted RBP9.66□□□□□ -0.86
SNCA-211ENST00000508895 PRPHP41219 470 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 RARRES1P49788 294 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 FXR2P51116 673 aaKnown RBP eCLIP9.66□□□□□ -0.86
SNCA-211ENST00000508895 RBM10P98175 930 aaKnown RBP9.66□□□□□ -0.86
SNCA-211ENST00000508895 GRIN1Q05586 938 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 LAMTOR4Q0VGL1 99 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 BTG3Q14201 252 aaPredicted RBP9.66□□□□□ -0.86
SNCA-211ENST00000508895 PTPAQ15257 358 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 SF3A1Q15459 793 aaKnown RBP9.66□□□□□ -0.86
SNCA-211ENST00000508895 TCEAL5Q5H9L2 206 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 ADGRD2Q7Z7M1 963 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 KLHL23Q8NBE8 558 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 FEZF2Q8TBJ5 459 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 USP28Q96RU2 1077 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 FTHL17Q9BXU8 183 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 ZSWIM4Q9H7M6 989 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 TYW1Q9NV66 732 aaKnown RBP9.66□□□□□ -0.86
SNCA-211ENST00000508895 CLIC4Q9Y696 253 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 ANK1P16157 1881 aa9.66□□□□□ -0.86
SNCA-211ENST00000508895 TDRD15B5MCY1 1934 aaKnown RBP9.65□□□□□ -0.86
SNCA-211ENST00000508895 DENND3A2RUS2 1198 aa9.65□□□□□ -0.86
SNCA-211ENST00000508895 LINC01565O15544 149 aa9.65□□□□□ -0.86
SNCA-211ENST00000508895 B4GALT5O43286 388 aa9.65□□□□□ -0.86
SNCA-211ENST00000508895 USO1O60763 962 aaKnown RBP9.65□□□□□ -0.86
SNCA-211ENST00000508895 BMP1P13497 986 aa9.65□□□□□ -0.86
SNCA-211ENST00000508895 PDIA4P13667 645 aaKnown RBP9.65□□□□□ -0.86
SNCA-211ENST00000508895 GLRA2P23416 452 aa9.65□□□□□ -0.86
SNCA-211ENST00000508895 TMOD1P28289 359 aa9.65□□□□□ -0.86
SNCA-211ENST00000508895 ARL2P36404 184 aa9.65□□□□□ -0.86
SNCA-211ENST00000508895 NASPP49321 788 aaPredicted RBP9.65□□□□□ -0.86
SNCA-211ENST00000508895 DLX2Q07687 328 aaPredicted RBP9.65□□□□□ -0.86
SNCA-211ENST00000508895 CAPSQ13938 189 aa9.65□□□□□ -0.86
SNCA-211ENST00000508895 AMHR2Q16671 573 aa9.65□□□□□ -0.86
SNCA-211ENST00000508895 SLC24A5Q71RS6 500 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms