RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 JAZF1Q86VZ6 243 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 RIOX2Q8IUF8 465 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 Q8N1Y9 231 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 TTLL6Q8N841 843 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 PIP4K2CQ8TBX8 421 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 MZB1Q8WU39 189 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 ZFYVE21Q9BQ24 234 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 ALG1Q9BT22 464 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 TMPRSS5Q9H3S3 457 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 EPB41L1Q9H4G0 881 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 FANCLQ9NW38 375 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 SFMBT1Q9UHJ3 866 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 SCN7AQ01118 1682 aa4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 NPIPB6E9PJ23 425 aa4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 N4BP3O15049 544 aa4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 BUB1BO60566 1050 aaPredicted RBP4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 RASGRP1O95267 797 aa4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 ASMTLO95671 621 aa4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 SRGNP10124 158 aa4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 GNAT1P11488 350 aa4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 HOXA5P20719 270 aa4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 MC3RP41968 323 aa4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 TMPOP42166 694 aaKnown RBP4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 PRELPP51888 382 aa4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 HLFQ16534 295 aa4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 BRAPQ7Z569 592 aa4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 IGDCC3Q8IVU1 814 aa4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 RBM12BQ8IXT5 1001 aaKnown RBP4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 CCDC146Q8IYE0 955 aa4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 CNBD1Q8NA66 436 aa4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 SEC14L1Q92503 715 aa4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 TSPAN17Q96FV3 270 aa4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 NCOA5Q9HCD5 579 aaKnown RBP4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 BABAM1Q9NWV8 329 aa4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 TMEM260Q9NX78 707 aa4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 SMG5Q9UPR3 1016 aaKnown RBP4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 PCDHA5Q9Y5H7 936 aa4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 AFDNP55196 1824 aaKnown RBP4.51□□□□□ -1.69
UBE2D3-226ENST00000508635 KDM3BQ7LBC6 1761 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 CCDC163A0A0D9SF12 145 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 KLRG2A4D1S0 409 aaPredicted RBP4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 ERVV-1B6SEH8 477 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 FAM47E-STBD1D6RA91 191 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 CHL1O00533 1208 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 HGSO14964 777 aaPredicted RBP4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 SLC27A2O14975 620 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 NKRFO15226 690 aaKnown RBP eCLIP4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 ASGR2P07307 311 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 PYGMP11217 842 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 ATF2P15336 505 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 GLDCP23378 1020 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 LIMS1P48059 325 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 SLC6A11P48066 632 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 ST5P78524 1137 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 LMOD3Q0VAK6 560 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 PAK1Q13153 545 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 SSPNQ14714 243 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 SLC9A5Q14940 896 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 CCDC184Q52MB2 194 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 GIMAP6Q6P9H5 292 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 FGD2Q7Z6J4 655 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 NBPF5PQ86XG9 351 aaPredicted RBP4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 ZC3H7AQ8IWR0 971 aaKnown RBP4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 NGEFQ8N5V2 710 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 PANK1Q8TE04 598 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 ZNF622Q969S3 477 aaKnown RBP eCLIP4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 RUNDC1Q96C34 613 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 MASTLQ96GX5 879 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 SCLYQ96I15 445 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 MAGEB10Q96LZ2 347 aaPredicted RBP4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 CLUHP3Q96NS8 147 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 NMRK2Q9NPI5 230 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 RNF181Q9P0P0 153 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 TSPYL4Q9UJ04 414 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 CNOT6Q9ULM6 557 aaKnown RBP4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 NIP7Q9Y221 180 aaKnown RBP eCLIP4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 ZNF652Q9Y2D9 606 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 RRP7AQ9Y3A4 280 aaKnown RBP4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 PCDHB4Q9Y5E5 795 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 IRAK3Q9Y616 596 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 ARFGEF1Q9Y6D6 1849 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 ADAMTS20P59510 1910 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 DLG5Q8TDM6 1919 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 BCORQ6W2J9 1755 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 DLEC1Q9Y238 1755 aa4.5□□□□□ -1.69
UBE2D3-226ENST00000508635 MAP3K15Q6ZN16 1313 aa4.49□□□□□ -1.69
UBE2D3-226ENST00000508635 KRIT1O00522 736 aa4.49□□□□□ -1.69
UBE2D3-226ENST00000508635 NPHP1O15259 732 aa4.49□□□□□ -1.69
UBE2D3-226ENST00000508635 FOXD2O60548 495 aaPredicted RBP4.49□□□□□ -1.69
UBE2D3-226ENST00000508635 EFCAB14O75071 495 aa4.49□□□□□ -1.69
UBE2D3-226ENST00000508635 TOMM70O94826 608 aa4.49□□□□□ -1.69
UBE2D3-226ENST00000508635 LTFP02788 710 aa4.49□□□□□ -1.69
UBE2D3-226ENST00000508635 MED14OSP0DP75 135 aa4.49□□□□□ -1.69
UBE2D3-226ENST00000508635 NCAM1P13591 858 aa4.49□□□□□ -1.69
UBE2D3-226ENST00000508635 MYL6BP14649 208 aa4.49□□□□□ -1.69
UBE2D3-226ENST00000508635 SYN1P17600 705 aa4.49□□□□□ -1.69
UBE2D3-226ENST00000508635 PFKLP17858 780 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms