RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 ZSCAN20P17040 1043 aaPredicted RBP18.18■□□□□ 0.5
LMNA-222ENST00000508500 FOSBP53539 338 aa18.18■□□□□ 0.5
LMNA-222ENST00000508500 CLUL1Q15846 466 aa18.18■□□□□ 0.5
LMNA-222ENST00000508500 PUS10Q3MIT2 529 aaKnown RBP18.18■□□□□ 0.5
LMNA-222ENST00000508500 SPOUT1Q5T280 376 aaKnown RBP18.18■□□□□ 0.5
LMNA-222ENST00000508500 RHPN2Q8IUC4 686 aa18.18■□□□□ 0.5
LMNA-222ENST00000508500 DYDC2Q96IM9 177 aa18.18■□□□□ 0.5
LMNA-222ENST00000508500 HCN4Q9Y3Q4 1203 aa18.18■□□□□ 0.5
LMNA-222ENST00000508500 WDFY4Q6ZS81 3184 aa18.18■□□□□ 0.5
LMNA-222ENST00000508500 PRR33A8MZF0 331 aa18.17■□□□□ 0.5
LMNA-222ENST00000508500 NCK2O43639 380 aa18.17■□□□□ 0.5
LMNA-222ENST00000508500 GLP2RO95838 553 aa18.17■□□□□ 0.5
LMNA-222ENST00000508500 ZP2Q05996 745 aa18.17■□□□□ 0.5
LMNA-222ENST00000508500 RBM23Q86U06 439 aaKnown RBP18.17■□□□□ 0.5
LMNA-222ENST00000508500 C4orf19Q8IY42 314 aa18.17■□□□□ 0.5
LMNA-222ENST00000508500 MSLNLQ96KJ4 702 aa18.17■□□□□ 0.5
LMNA-222ENST00000508500 SCLT1Q96NL6 688 aa18.17■□□□□ 0.5
LMNA-222ENST00000508500 LXNQ9BS40 222 aa18.17■□□□□ 0.5
LMNA-222ENST00000508500 GCOM2Q9BZD3 368 aaPredicted RBP18.17■□□□□ 0.5
LMNA-222ENST00000508500 DHX33Q9H6R0 707 aaKnown RBP18.17■□□□□ 0.5
LMNA-222ENST00000508500 IFT122Q9HBG6 1241 aa18.17■□□□□ 0.5
LMNA-222ENST00000508500 RNF216Q9NWF9 866 aaPredicted RBP18.17■□□□□ 0.5
LMNA-222ENST00000508500 CLEC1BQ9P126 229 aa18.17■□□□□ 0.5
LMNA-222ENST00000508500 PCDHB12Q9Y5F1 795 aa18.17■□□□□ 0.5
LMNA-222ENST00000508500 FSCN2O14926 492 aa18.16■□□□□ 0.5
LMNA-222ENST00000508500 MBTPS2O43462 519 aa18.16■□□□□ 0.5
LMNA-222ENST00000508500 SLITRK3O94933 977 aa18.16■□□□□ 0.5
LMNA-222ENST00000508500 PBX3P40426 434 aa18.16■□□□□ 0.5
LMNA-222ENST00000508500 NRIP1P48552 1158 aa18.16■□□□□ 0.5
LMNA-222ENST00000508500 RBM10P98175 930 aaKnown RBP18.16■□□□□ 0.5
LMNA-222ENST00000508500 CTTNQ14247 550 aaKnown RBP18.16■□□□□ 0.5
LMNA-222ENST00000508500 NCAPH2Q6IBW4 605 aa18.16■□□□□ 0.5
LMNA-222ENST00000508500 ZNF410Q86VK4 478 aa18.16■□□□□ 0.5
LMNA-222ENST00000508500 DIS3L2Q8IYB7 885 aaKnown RBP18.16■□□□□ 0.5
LMNA-222ENST00000508500 KIF2CQ99661 725 aa18.16■□□□□ 0.5
LMNA-222ENST00000508500 NAP1L4Q99733 375 aaKnown RBP18.16■□□□□ 0.5
LMNA-222ENST00000508500 BMP2KQ9NSY1 1161 aaPredicted RBP18.16■□□□□ 0.5
LMNA-222ENST00000508500 TDRD15B5MCY1 1934 aaKnown RBP18.15■□□□□ 0.5
LMNA-222ENST00000508500 PIEZO1Q92508 2521 aa18.15■□□□□ 0.5
LMNA-222ENST00000508500 MEIS3P2A8K0S8 358 aa18.15■□□□□ 0.5
LMNA-222ENST00000508500 EOMESO95936 686 aa18.15■□□□□ 0.5
LMNA-222ENST00000508500 YWHABP31946 246 aaKnown RBP18.15■□□□□ 0.5
LMNA-222ENST00000508500 DNM2P50570 870 aa18.15■□□□□ 0.5
LMNA-222ENST00000508500 CDC42EP1Q00587 391 aa18.15■□□□□ 0.5
LMNA-222ENST00000508500 CYP4A11Q02928 519 aa18.15■□□□□ 0.5
LMNA-222ENST00000508500 UBE3AQ05086 875 aa18.15■□□□□ 0.5
LMNA-222ENST00000508500 EFHBQ8N7U6 833 aa18.15■□□□□ 0.5
LMNA-222ENST00000508500 RNF169Q8NCN4 708 aa18.15■□□□□ 0.5
LMNA-222ENST00000508500 VN1R2Q8NFZ6 395 aa18.15■□□□□ 0.5
LMNA-222ENST00000508500 HELQQ8TDG4 1101 aa18.15■□□□□ 0.5
LMNA-222ENST00000508500 TMEM143Q96AN5 459 aa18.15■□□□□ 0.5
LMNA-222ENST00000508500 CEP170P1Q96L14 293 aa18.15■□□□□ 0.5
LMNA-222ENST00000508500 NLRP4Q96MN2 994 aa18.15■□□□□ 0.5
LMNA-222ENST00000508500 TRAIPQ9BWF2 469 aa18.15■□□□□ 0.5
LMNA-222ENST00000508500 MINDY3Q9H8M7 445 aa18.15■□□□□ 0.5
LMNA-222ENST00000508500 TLR9Q9NR96 1032 aa18.15■□□□□ 0.5
LMNA-222ENST00000508500 CHST12Q9NRB3 414 aa18.15■□□□□ 0.5
LMNA-222ENST00000508500 AAASQ9NRG9 546 aa18.15■□□□□ 0.5
LMNA-222ENST00000508500 PRKAG3Q9UGI9 489 aa18.15■□□□□ 0.5
LMNA-222ENST00000508500 PER2O15055 1255 aa18.14■□□□□ 0.49
LMNA-222ENST00000508500 HOXA2O43364 376 aa18.14■□□□□ 0.49
LMNA-222ENST00000508500 LAG3P18627 525 aa18.14■□□□□ 0.49
LMNA-222ENST00000508500 PHKA2P46019 1235 aa18.14■□□□□ 0.49
LMNA-222ENST00000508500 PLCB3Q01970 1234 aa18.14■□□□□ 0.49
LMNA-222ENST00000508500 SMAD2Q15796 467 aaKnown RBP18.14■□□□□ 0.49
LMNA-222ENST00000508500 KCNT2Q6UVM3 1135 aa18.14■□□□□ 0.49
LMNA-222ENST00000508500 SLFN12Q8IYM2 578 aa18.14■□□□□ 0.49
LMNA-222ENST00000508500 THNSL1Q8IYQ7 743 aa18.14■□□□□ 0.49
LMNA-222ENST00000508500 PRPF31Q8WWY3 499 aaKnown RBP18.14■□□□□ 0.49
LMNA-222ENST00000508500 LPPQ93052 612 aa18.14■□□□□ 0.49
LMNA-222ENST00000508500 MTMR9Q96QG7 549 aa18.14■□□□□ 0.49
LMNA-222ENST00000508500 HSD17B14Q9BPX1 270 aa18.14■□□□□ 0.49
LMNA-222ENST00000508500 EIF2AK1Q9BQI3 630 aaKnown RBP18.14■□□□□ 0.49
LMNA-222ENST00000508500 XPNPEP1Q9NQW7 623 aa18.14■□□□□ 0.49
LMNA-222ENST00000508500 COL4A3BPQ9Y5P4 624 aa18.14■□□□□ 0.49
LMNA-222ENST00000508500 MARCH6O60337 910 aa18.13■□□□□ 0.49
LMNA-222ENST00000508500 DKC1O60832 514 aaKnown RBP eCLIP18.13■□□□□ 0.49
LMNA-222ENST00000508500 GUCY1B3Q02153 619 aa18.13■□□□□ 0.49
LMNA-222ENST00000508500 LONRF3Q496Y0 759 aa18.13■□□□□ 0.49
LMNA-222ENST00000508500 C8orf34Q49A92 452 aa18.13■□□□□ 0.49
LMNA-222ENST00000508500 CCDC83Q8IWF9 413 aa18.13■□□□□ 0.49
LMNA-222ENST00000508500 ADHFE1Q8IWW8 467 aa18.13■□□□□ 0.49
LMNA-222ENST00000508500 LRRC43Q8N309 656 aa18.13■□□□□ 0.49
LMNA-222ENST00000508500 MRPS27Q92552 414 aaKnown RBP18.13■□□□□ 0.49
LMNA-222ENST00000508500 JPH2Q9BR39 696 aaPredicted RBP18.13■□□□□ 0.49
LMNA-222ENST00000508500 TMEM60Q9H2L4 133 aa18.13■□□□□ 0.49
LMNA-222ENST00000508500 ZSWIM4Q9H7M6 989 aa18.13■□□□□ 0.49
LMNA-222ENST00000508500 BRMS1Q9HCU9 246 aa18.13■□□□□ 0.49
LMNA-222ENST00000508500 DACT1Q9NYF0 836 aa18.13■□□□□ 0.49
LMNA-222ENST00000508500 CD207Q9UJ71 328 aa18.13■□□□□ 0.49
LMNA-222ENST00000508500 BARX2Q9UMQ3 279 aaPredicted RBP18.13■□□□□ 0.49
LMNA-222ENST00000508500 PCDHA12Q9UN75 941 aa18.13■□□□□ 0.49
LMNA-222ENST00000508500 PIN4Q9Y237 131 aaKnown RBP18.13■□□□□ 0.49
LMNA-222ENST00000508500 TECTAO75443 2155 aa18.13■□□□□ 0.49
LMNA-222ENST00000508500 MYO10Q9HD67 2058 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 A0A087WWV3 80 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 BAG4O95429 457 aaKnown RBP18.12■□□□□ 0.49
LMNA-222ENST00000508500 EYA4O95677 639 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 SRGAP2CP0DJJ0 459 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 SFPQP23246 707 aaKnown RBP eCLIP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms