RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 PLA2G4FQ68DD2 849 aa14.6□□□□□ -0.07
HMGCS1-205ENST00000508319 HAS1Q92839 578 aa14.6□□□□□ -0.07
HMGCS1-205ENST00000508319 TNFRSF25Q93038 417 aa14.6□□□□□ -0.07
HMGCS1-205ENST00000508319 FAM20AQ96MK3 541 aa14.6□□□□□ -0.07
HMGCS1-205ENST00000508319 WRAP73Q9P2S5 460 aaPredicted RBP14.6□□□□□ -0.07
HMGCS1-205ENST00000508319 MUC6Q6W4X9 2439 aa14.6□□□□□ -0.07
HMGCS1-205ENST00000508319 A0A087WZ62 844 aa14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 DDX11L8A8MPP1 907 aa14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 FSCN2O14926 492 aa14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 TBX3O15119 743 aa14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 CCNT1O60563 726 aaKnown RBP14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 PBX3P40426 434 aa14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 QARSP47897 775 aaKnown RBP14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 ERVFC1P60507 584 aa14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 CDC42EP1Q00587 391 aa14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 SPIRE1Q08AE8 756 aa14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 NR5A1Q13285 461 aa14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 ME3Q16798 604 aa14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 RBM23Q86U06 439 aaKnown RBP14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 ZNF410Q86VK4 478 aa14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 NECAB1Q8N987 351 aa14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 SMRP1Q8NCR6 262 aa14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 VN1R2Q8NFZ6 395 aa14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 GTF3C6Q969F1 213 aa14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 FDXACB1Q9BRP7 624 aaPredicted RBP14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 GCOM2Q9BZD3 368 aaPredicted RBP14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 CYP26B1Q9NR63 512 aa14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 DACT1Q9NYF0 836 aa14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 BARX2Q9UMQ3 279 aaPredicted RBP14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 LZTS1Q9Y250 596 aa14.59□□□□□ -0.07
HMGCS1-205ENST00000508319 ABCB7O75027 752 aa14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 SFPQP23246 707 aaKnown RBP eCLIP14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 DNM2P50570 870 aa14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 NPEPPSP55786 919 aa14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 RBM10P98175 930 aaKnown RBP14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 PLCB3Q01970 1234 aa14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 COASYQ13057 564 aa14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 ERICH6BQ5W0A0 696 aa14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 KCNT2Q6UVM3 1135 aa14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 RHPN2Q8IUC4 686 aa14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 KSR1Q8IVT5 923 aa14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 ABI1Q8IZP0 508 aa14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 ZNF579Q8NAF0 562 aaKnown RBP14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 RNF169Q8NCN4 708 aa14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 NSUN7Q8NE18 718 aaKnown RBP14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 HELQQ8TDG4 1101 aa14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 MRPS27Q92552 414 aaKnown RBP14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 WASF1Q92558 559 aa14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 NAP1L4Q99733 375 aaKnown RBP14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 LXNQ9BS40 222 aa14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 TRAIPQ9BWF2 469 aa14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 SUCLA2Q9P2R7 463 aaPredicted RBP14.58□□□□□ -0.08
HMGCS1-205ENST00000508319 PER2O15055 1255 aa14.57□□□□□ -0.08
HMGCS1-205ENST00000508319 DCXO43602 365 aa14.57□□□□□ -0.08
HMGCS1-205ENST00000508319 P4HBP07237 508 aaKnown RBP14.57□□□□□ -0.08
HMGCS1-205ENST00000508319 ALADP13716 330 aa14.57□□□□□ -0.08
HMGCS1-205ENST00000508319 PPM1AP35813 382 aa14.57□□□□□ -0.08
HMGCS1-205ENST00000508319 KRT2P35908 639 aa14.57□□□□□ -0.08
HMGCS1-205ENST00000508319 PHKA2P46019 1235 aa14.57□□□□□ -0.08
HMGCS1-205ENST00000508319 DUSP6Q16828 381 aa14.57□□□□□ -0.08
HMGCS1-205ENST00000508319 PLPP4Q5VZY2 271 aa14.57□□□□□ -0.08
HMGCS1-205ENST00000508319 MICAL1Q8TDZ2 1067 aa14.57□□□□□ -0.08
HMGCS1-205ENST00000508319 SLC7A3Q8WY07 619 aa14.57□□□□□ -0.08
HMGCS1-205ENST00000508319 NLRP4Q96MN2 994 aa14.57□□□□□ -0.08
HMGCS1-205ENST00000508319 ZNF558Q96NG5 402 aa14.57□□□□□ -0.08
HMGCS1-205ENST00000508319 POP1Q99575 1024 aaKnown RBP14.57□□□□□ -0.08
HMGCS1-205ENST00000508319 CDCA3Q99618 268 aaPredicted RBP14.57□□□□□ -0.08
HMGCS1-205ENST00000508319 DHX33Q9H6R0 707 aaKnown RBP14.57□□□□□ -0.08
HMGCS1-205ENST00000508319 TLE6Q9H808 572 aa14.57□□□□□ -0.08
HMGCS1-205ENST00000508319 IFT122Q9HBG6 1241 aa14.57□□□□□ -0.08
HMGCS1-205ENST00000508319 CHST12Q9NRB3 414 aa14.57□□□□□ -0.08
HMGCS1-205ENST00000508319 PIN4Q9Y237 131 aaKnown RBP14.57□□□□□ -0.08
HMGCS1-205ENST00000508319 DKC1O60832 514 aaKnown RBP eCLIP14.56□□□□□ -0.08
HMGCS1-205ENST00000508319 EOMESO95936 686 aa14.56□□□□□ -0.08
HMGCS1-205ENST00000508319 POLGP54098 1239 aaPredicted RBP14.56□□□□□ -0.08
HMGCS1-205ENST00000508319 ST3GAL1Q11201 340 aa14.56□□□□□ -0.08
HMGCS1-205ENST00000508319 KCNC3Q14003 757 aa14.56□□□□□ -0.08
HMGCS1-205ENST00000508319 EPHA7Q15375 998 aa14.56□□□□□ -0.08
HMGCS1-205ENST00000508319 TWF2Q6IBS0 349 aaKnown RBP14.56□□□□□ -0.08
HMGCS1-205ENST00000508319 NCAPH2Q6IBW4 605 aa14.56□□□□□ -0.08
HMGCS1-205ENST00000508319 PDE12Q6L8Q7 609 aaKnown RBP14.56□□□□□ -0.08
HMGCS1-205ENST00000508319 C4orf19Q8IY42 314 aa14.56□□□□□ -0.08
HMGCS1-205ENST00000508319 SLFN12Q8IYM2 578 aa14.56□□□□□ -0.08
HMGCS1-205ENST00000508319 SLC39A11Q8N1S5 342 aa14.56□□□□□ -0.08
HMGCS1-205ENST00000508319 CEP170P1Q96L14 293 aa14.56□□□□□ -0.08
HMGCS1-205ENST00000508319 TCF25Q9BQ70 676 aa14.56□□□□□ -0.08
HMGCS1-205ENST00000508319 JPH2Q9BR39 696 aaPredicted RBP14.56□□□□□ -0.08
HMGCS1-205ENST00000508319 MRPL9Q9BYD2 267 aaKnown RBP14.56□□□□□ -0.08
HMGCS1-205ENST00000508319 INO80BQ9C086 356 aaPredicted RBP14.56□□□□□ -0.08
HMGCS1-205ENST00000508319 RGL1Q9NZL6 768 aa14.56□□□□□ -0.08
HMGCS1-205ENST00000508319 PPME1Q9Y570 386 aa14.56□□□□□ -0.08
HMGCS1-205ENST00000508319 COL4A3BPQ9Y5P4 624 aa14.56□□□□□ -0.08
HMGCS1-205ENST00000508319 FSD2A1L4K1 749 aa14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 HIDE1A8MVS5 230 aa14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 PRR33A8MZF0 331 aa14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 WNT7AO00755 349 aa14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 JAK2O60674 1132 aa14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 YWHABP31946 246 aaKnown RBP14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 PLA2G5P39877 138 aa14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 RFC5P40937 340 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms