RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 ZNF302Q9NR11 478 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 SPG21Q9NZD8 308 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 FBXL21Q9UKT6 434 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 NAP1L2Q9ULW6 460 aaPredicted RBP6.55□□□□□ -1.36
GYPB-208ENST00000507009 RBM8AQ9Y5S9 174 aaKnown RBP6.55□□□□□ -1.36
GYPB-208ENST00000507009 HCFC2Q9Y5Z7 792 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 NFASCO94856 1347 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 KDM3AQ9Y4C1 1321 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 C2orf71A6NGG8 1288 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 SH2B2O14492 632 aaPredicted RBP6.54□□□□□ -1.36
GYPB-208ENST00000507009 MAFGO15525 162 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 CLASP2O75122 1294 aaKnown RBP6.54□□□□□ -1.36
GYPB-208ENST00000507009 ZC3H11AO75152 810 aaKnown RBP eCLIP6.54□□□□□ -1.36
GYPB-208ENST00000507009 CCNE2O96020 404 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 SSBP05455 408 aaKnown RBP eCLIP6.54□□□□□ -1.36
GYPB-208ENST00000507009 EPCAMP16422 314 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 HOXB8P17481 243 aaPredicted RBP6.54□□□□□ -1.36
GYPB-208ENST00000507009 CHMLP26374 656 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 PPM1AP35813 382 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 MLLT3P42568 568 aaPredicted RBP6.54□□□□□ -1.36
GYPB-208ENST00000507009 MTHFRP42898 656 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 ADCY7P51828 1080 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 NLRP11P59045 1033 aaKnown RBP6.54□□□□□ -1.36
GYPB-208ENST00000507009 FOXK2Q01167 660 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 PLCB3Q01970 1234 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 KCNC3Q14003 757 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 COL9A3Q14050 684 aaPredicted RBP6.54□□□□□ -1.36
GYPB-208ENST00000507009 ZNF484Q5JVG2 852 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 SWT1Q5T5J6 900 aaKnown RBP6.54□□□□□ -1.36
GYPB-208ENST00000507009 TTC22Q5TAA0 569 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 JAKMIP3Q5VZ66 844 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 WWC2Q6AWC2 1192 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 MCTP2Q6DN12 878 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 MIS18BP1Q6P0N0 1132 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 TMC5Q6UXY8 1006 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 PLA2G4DQ86XP0 818 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 ECHDC2Q86YB7 292 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 LRRC43Q8N309 656 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 LRRC71Q8N4P6 559 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 EXOC6Q8TAG9 804 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 FEZF2Q8TBJ5 459 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 MAP3K14Q99558 947 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 HINFPQ9BQA5 517 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 ANO3Q9BYT9 981 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 GBP3Q9H0R5 595 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 ADAM7Q9H2U9 754 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 LZTS1Q9Y250 596 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 INPP5FQ9Y2H2 1132 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 SAMM50Q9Y512 469 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 SLC12A7Q9Y666 1083 aa6.54□□□□□ -1.36
GYPB-208ENST00000507009 MYH9P35579 1960 aaKnown RBP6.53□□□□□ -1.36
GYPB-208ENST00000507009 SPTBN4Q9H254 2564 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 SMCO2A6NFE2 343 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 PROB1E7EW31 1015 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 HOXA2O43364 376 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 PI15O43692 258 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 CSDE1O75534 798 aaKnown RBP6.53□□□□□ -1.36
GYPB-208ENST00000507009 C22orf31O95567 290 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 CFHP08603 1231 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 CALM1P0DP23 149 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 CALM2P0DP24 149 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 CALM3P0DP25 149 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 ATP4AP20648 1035 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 MCM5P33992 734 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 NBL1P41271 181 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 ALDH7A1P49419 539 aaKnown RBP6.53□□□□□ -1.36
GYPB-208ENST00000507009 SLC26A2P50443 739 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 BCAR1P56945 870 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 RNASELQ05823 741 aaKnown RBP6.53□□□□□ -1.36
GYPB-208ENST00000507009 ITIH3Q06033 890 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 DSC3Q14574 896 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 BMS1Q14692 1282 aaKnown RBP6.53□□□□□ -1.36
GYPB-208ENST00000507009 ANGPT1Q15389 498 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 CEP55Q53EZ4 464 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 CLLU1OSQ5K130 101 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 SPECC1Q5M775 1068 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 ATAT1Q5SQI0 421 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 EFCAB12Q6NXP0 572 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 ABHD15Q6UXT9 468 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 TMEM184AQ6ZMB5 413 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 SYNE3Q6ZMZ3 975 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 TMTC3Q6ZXV5 915 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 CABP7Q86V35 215 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 SIX5Q8N196 739 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 VPS52Q8N1B4 723 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 SLC39A11Q8N1S5 342 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 MRPL43Q8N983 215 aaKnown RBP6.53□□□□□ -1.36
GYPB-208ENST00000507009 FANCBQ8NB91 859 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 RASGRP4Q8TDF6 673 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 NLRP7Q8WX94 980 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 RIN2Q8WYP3 895 aaPredicted RBP6.53□□□□□ -1.36
GYPB-208ENST00000507009 ZNF516Q92618 1163 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 TMEM169Q96HH4 297 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 YTHDC1Q96MU7 727 aaKnown RBP6.53□□□□□ -1.36
GYPB-208ENST00000507009 NECTIN4Q96NY8 510 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 MAP7D2Q96T17 732 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 ZNF577Q9BSK1 485 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 RNF19AQ9NV58 838 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 GABBR1Q9UBS5 961 aa6.53□□□□□ -1.36
GYPB-208ENST00000507009 R4GN57 208 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms