RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 CCT6AP40227 531 aaKnown RBP8.1□□□□□ -1.11
GYPB-206ENST00000506516 CLCN3P51790 818 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 NPEPPSP55786 919 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 NLRP11P59045 1033 aaKnown RBP8.1□□□□□ -1.11
GYPB-206ENST00000506516 ATP2C1P98194 919 aaPredicted RBP8.1□□□□□ -1.11
GYPB-206ENST00000506516 RESTQ13127 1097 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 LPIN1Q14693 890 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 MBTPS1Q14703 1052 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 SF3A1Q15459 793 aaKnown RBP8.1□□□□□ -1.11
GYPB-206ENST00000506516 QPCTQ16769 361 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 PPP2R2DQ66LE6 453 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 PLA2G4FQ68DD2 849 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 TSHZ1Q6ZSZ6 1077 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 LRRC71Q8N4P6 559 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 KCTD17Q8N5Z5 321 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 IGSF22Q8N9C0 903 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 TCP11Q8WWU5 503 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 VWCEQ96DN2 955 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 AK8Q96MA6 479 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 CEP89Q96ST8 783 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 SLC9A7Q96T83 725 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 SH2D3AQ9BRG2 576 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 FTHL17Q9BXU8 183 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 INO80BQ9C086 356 aaPredicted RBP8.1□□□□□ -1.11
GYPB-206ENST00000506516 CXXC1Q9P0U4 656 aaPredicted RBP8.1□□□□□ -1.11
GYPB-206ENST00000506516 SUCLA2Q9P2R7 463 aaPredicted RBP8.1□□□□□ -1.11
GYPB-206ENST00000506516 WRAP73Q9P2S5 460 aaPredicted RBP8.1□□□□□ -1.11
GYPB-206ENST00000506516 MSRAQ9UJ68 235 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 LTBP2Q14767 1821 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 VWA3AA6NCI4 1184 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 ZBTB39O15060 712 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 LILRB3O75022 631 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 GPR32O75388 356 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 MED24O75448 989 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 RPS6KA5O75582 802 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 DGAT1O75907 488 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 AMHP03971 560 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 SPATA31C1P0DKV0 1188 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 ZSCAN22P10073 491 aaPredicted RBP8.09□□□□□ -1.11
GYPB-206ENST00000506516 ATP2A2P16615 1042 aaKnown RBP8.09□□□□□ -1.11
GYPB-206ENST00000506516 EIF4BP23588 611 aaKnown RBP8.09□□□□□ -1.11
GYPB-206ENST00000506516 UBA7P41226 1012 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 RARRES1P49788 294 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 FXR1P51114 621 aaKnown RBP eCLIP8.09□□□□□ -1.11
GYPB-206ENST00000506516 NFX1Q12986 1120 aaKnown RBP8.09□□□□□ -1.11
GYPB-206ENST00000506516 PAK2Q13177 524 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 RAB30Q15771 203 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 KIZQ2M2Z5 673 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 FBXO47Q5MNV8 452 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 RHPN2Q8IUC4 686 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 SNX29Q8TEQ0 813 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 PIGOQ8TEQ8 1089 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 PSPC1Q8WXF1 523 aaKnown RBP8.09□□□□□ -1.11
GYPB-206ENST00000506516 ZNF396Q96N95 335 aaPredicted RBP8.09□□□□□ -1.11
GYPB-206ENST00000506516 SCLT1Q96NL6 688 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 MTRQ99707 1265 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 GCOM2Q9BZD3 368 aaPredicted RBP8.09□□□□□ -1.11
GYPB-206ENST00000506516 NT5C3AQ9H0P0 336 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 DHX33Q9H6R0 707 aaKnown RBP8.09□□□□□ -1.11
GYPB-206ENST00000506516 DBR1Q9UK59 544 aaKnown RBP8.09□□□□□ -1.11
GYPB-206ENST00000506516 PADI3Q9ULW8 664 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 PCDHGC3Q9UN70 934 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 KIAA1024Q9UPX6 916 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 DNM3Q9UQ16 869 aa8.09□□□□□ -1.11
GYPB-206ENST00000506516 RANBP2P49792 3224 aaKnown RBP8.09□□□□□ -1.11
GYPB-206ENST00000506516 ARHGEF35A5YM69 484 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 ENPP3O14638 875 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 SLC26A4O43511 780 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 ZSCAN20P17040 1043 aaPredicted RBP8.08□□□□□ -1.12
GYPB-206ENST00000506516 CD52P31358 61 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 LONP1P36776 959 aaKnown RBP8.08□□□□□ -1.12
GYPB-206ENST00000506516 GPC3P51654 580 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 WDR5P61964 334 aaKnown RBP8.08□□□□□ -1.12
GYPB-206ENST00000506516 MXD4Q14582 209 aaPredicted RBP8.08□□□□□ -1.12
GYPB-206ENST00000506516 EMC2Q15006 297 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 ZRSR1Q15695 479 aaKnown RBP8.08□□□□□ -1.12
GYPB-206ENST00000506516 IL17AQ16552 155 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 FAM109BQ6ICB4 259 aaPredicted RBP8.08□□□□□ -1.12
GYPB-206ENST00000506516 ZNF410Q86VK4 478 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 HERC6Q8IVU3 1022 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 MYOCDQ8IZQ8 938 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 LINC01465Q8N7H1 131 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 MCPH1Q8NEM0 835 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 TMEM143Q96AN5 459 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 CALML4Q96GE6 196 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 CDK5RAP3Q96JB5 506 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 PPP1R16BQ96T49 567 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 OSMRQ99650 979 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 AGO3Q9H9G7 860 aaKnown RBP8.08□□□□□ -1.12
GYPB-206ENST00000506516 ATP6V0A4Q9HBG4 840 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 DDX19AQ9NUU7 478 aaKnown RBP8.08□□□□□ -1.12
GYPB-206ENST00000506516 ST3GAL5Q9UNP4 418 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 NOC2LQ9Y3T9 749 aaKnown RBP8.08□□□□□ -1.12
GYPB-206ENST00000506516 PCDHA11Q9Y5I1 949 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 CLIC4Q9Y696 253 aa8.08□□□□□ -1.12
GYPB-206ENST00000506516 TMEM265A0A087WTH1 108 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 A0A087WWV3 80 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 A0A087WZ62 844 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 DENND3A2RUS2 1198 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 GRXCR1A8MXD5 290 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms