RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	DUSP6	Q16828	381 aa		18.35	■□□□□ 0.53
DDR1-256	ENST00000505066	CES5A	Q6NT32	575 aa		18.35	■□□□□ 0.53
DDR1-256	ENST00000505066	RNF135	Q8IUD6	432 aa		18.35	■□□□□ 0.53
DDR1-256	ENST00000505066	SLFN12	Q8IYM2	578 aa		18.35	■□□□□ 0.53
DDR1-256	ENST00000505066	URGCP	Q8TCY9	931 aa		18.35	■□□□□ 0.53
DDR1-256	ENST00000505066	MSLNL	Q96KJ4	702 aa		18.35	■□□□□ 0.53
DDR1-256	ENST00000505066	NLRP4	Q96MN2	994 aa		18.35	■□□□□ 0.53
DDR1-256	ENST00000505066	CASD1	Q96PB1	797 aa		18.35	■□□□□ 0.53
DDR1-256	ENST00000505066	PHF7	Q9BWX1	381 aa	Predicted RBP	18.35	■□□□□ 0.53
DDR1-256	ENST00000505066	KCNH6	Q9H252	994 aa		18.35	■□□□□ 0.53
DDR1-256	ENST00000505066	USP15	Q9Y4E8	981 aa	Predicted RBP	18.35	■□□□□ 0.53
DDR1-256	ENST00000505066	ADAMTS3	O15072	1205 aa		18.34	■□□□□ 0.53
DDR1-256	ENST00000505066	GAS2	O43903	313 aa	Known RBP	18.34	■□□□□ 0.53
DDR1-256	ENST00000505066	P4HB	P07237	508 aa	Known RBP	18.34	■□□□□ 0.53
DDR1-256	ENST00000505066	RFC5	P40937	340 aa		18.34	■□□□□ 0.53
DDR1-256	ENST00000505066	TEC	P42680	631 aa		18.34	■□□□□ 0.53
DDR1-256	ENST00000505066	GIT2	Q14161	759 aa		18.34	■□□□□ 0.53
DDR1-256	ENST00000505066	SUGP1	Q8IWZ8	645 aa	Known RBP	18.34	■□□□□ 0.53
DDR1-256	ENST00000505066	LINC01465	Q8N7H1	131 aa		18.34	■□□□□ 0.53
DDR1-256	ENST00000505066	HELQ	Q8TDG4	1101 aa		18.34	■□□□□ 0.53
DDR1-256	ENST00000505066	TCP11	Q8WWU5	503 aa		18.34	■□□□□ 0.53
DDR1-256	ENST00000505066	PSPC1	Q8WXF1	523 aa	Known RBP	18.34	■□□□□ 0.53
DDR1-256	ENST00000505066	CASP10	Q92851	521 aa		18.34	■□□□□ 0.53
DDR1-256	ENST00000505066	RPGRIP1	Q96KN7	1286 aa		18.34	■□□□□ 0.53
DDR1-256	ENST00000505066	CEP170P1	Q96L14	293 aa		18.34	■□□□□ 0.53
DDR1-256	ENST00000505066	FAM193B	Q96PV7	902 aa	Predicted RBP	18.34	■□□□□ 0.53
DDR1-256	ENST00000505066	LARP6	Q9BRS8	491 aa	Known RBP	18.34	■□□□□ 0.53
DDR1-256	ENST00000505066	CWH43	Q9H720	699 aa		18.34	■□□□□ 0.53
DDR1-256	ENST00000505066	NR2E1	Q9Y466	385 aa		18.34	■□□□□ 0.53
DDR1-256	ENST00000505066		A0A087WZ62	844 aa		18.33	■□□□□ 0.52
DDR1-256	ENST00000505066	TBX3	O15119	743 aa		18.33	■□□□□ 0.52
DDR1-256	ENST00000505066	MAF	O75444	373 aa	Predicted RBP	18.33	■□□□□ 0.52
DDR1-256	ENST00000505066	ATF7	P17544	494 aa	Predicted RBP	18.33	■□□□□ 0.52
DDR1-256	ENST00000505066	ERVFC1	P60507	584 aa		18.33	■□□□□ 0.52
DDR1-256	ENST00000505066	TARBP2	Q15633	366 aa	Known RBP	18.33	■□□□□ 0.52
DDR1-256	ENST00000505066	HERC4	Q5GLZ8	1057 aa	Predicted RBP	18.33	■□□□□ 0.52
DDR1-256	ENST00000505066	PPP4R3A	Q6IN85	833 aa		18.33	■□□□□ 0.52
DDR1-256	ENST00000505066	LLGL2	Q6P1M3	1020 aa		18.33	■□□□□ 0.52
DDR1-256	ENST00000505066	GJA10	Q969M2	543 aa		18.33	■□□□□ 0.52
DDR1-256	ENST00000505066	FDXACB1	Q9BRP7	624 aa	Predicted RBP	18.33	■□□□□ 0.52
DDR1-256	ENST00000505066	CYP26B1	Q9NR63	512 aa		18.33	■□□□□ 0.52
DDR1-256	ENST00000505066	CLEC1B	Q9P126	229 aa		18.33	■□□□□ 0.52
DDR1-256	ENST00000505066	MUTYH	Q9UIF7	546 aa		18.33	■□□□□ 0.52
DDR1-256	ENST00000505066	KCNJ14	Q9UNX9	436 aa		18.33	■□□□□ 0.52
DDR1-256	ENST00000505066	BRWD1	Q9NSI6	2320 aa		18.32	■□□□□ 0.52
DDR1-256	ENST00000505066	STK36	Q9NRP7	1315 aa		18.32	■□□□□ 0.52
DDR1-256	ENST00000505066	ASAP2	O43150	1006 aa		18.32	■□□□□ 0.52
DDR1-256	ENST00000505066	ZC3H11A	O75152	810 aa	Known RBP eCLIP	18.32	■□□□□ 0.52
DDR1-256	ENST00000505066	FGFR4	P22455	802 aa		18.32	■□□□□ 0.52
DDR1-256	ENST00000505066	ANAPC15	P60006	121 aa		18.32	■□□□□ 0.52
DDR1-256	ENST00000505066	PPP2R5C	Q13362	524 aa		18.32	■□□□□ 0.52
DDR1-256	ENST00000505066	ELMSAN1	Q6PJG2	1045 aa		18.32	■□□□□ 0.52
DDR1-256	ENST00000505066	PIK3AP1	Q6ZUJ8	805 aa		18.32	■□□□□ 0.52
DDR1-256	ENST00000505066	ETNPPL	Q8TBG4	499 aa		18.32	■□□□□ 0.52
DDR1-256	ENST00000505066	EDA	Q92838	391 aa		18.32	■□□□□ 0.52
DDR1-256	ENST00000505066	C11orf16	Q9NQ32	467 aa		18.32	■□□□□ 0.52
DDR1-256	ENST00000505066	INPP5F	Q9Y2H2	1132 aa		18.32	■□□□□ 0.52
DDR1-256	ENST00000505066	COL4A3BP	Q9Y5P4	624 aa		18.32	■□□□□ 0.52
DDR1-256	ENST00000505066	FSCN2	O14926	492 aa		18.31	■□□□□ 0.52
DDR1-256	ENST00000505066	NR1I2	O75469	434 aa		18.31	■□□□□ 0.52
DDR1-256	ENST00000505066	ERLIN2	O94905	339 aa		18.31	■□□□□ 0.52
DDR1-256	ENST00000505066	CXCL14	O95715	111 aa		18.31	■□□□□ 0.52
DDR1-256	ENST00000505066	KRT2	P35908	639 aa		18.31	■□□□□ 0.52
DDR1-256	ENST00000505066	PHKA2	P46019	1235 aa		18.31	■□□□□ 0.52
DDR1-256	ENST00000505066	TFDP1	Q14186	410 aa		18.31	■□□□□ 0.52
DDR1-256	ENST00000505066	CBX2	Q14781	532 aa	Predicted RBP	18.31	■□□□□ 0.52
DDR1-256	ENST00000505066	NCAPH2	Q6IBW4	605 aa		18.31	■□□□□ 0.52
DDR1-256	ENST00000505066	HACE1	Q8IYU2	909 aa		18.31	■□□□□ 0.52
DDR1-256	ENST00000505066	MBOAT7	Q96N66	472 aa		18.31	■□□□□ 0.52
DDR1-256	ENST00000505066	NECTIN4	Q96NY8	510 aa		18.31	■□□□□ 0.52
DDR1-256	ENST00000505066	PRRX2	Q99811	253 aa		18.31	■□□□□ 0.52
DDR1-256	ENST00000505066	PHF20	Q9BVI0	1012 aa		18.31	■□□□□ 0.52
DDR1-256	ENST00000505066	ZSWIM4	Q9H7M6	989 aa		18.31	■□□□□ 0.52
DDR1-256	ENST00000505066	KANSL3	Q9P2N6	904 aa		18.31	■□□□□ 0.52
DDR1-256	ENST00000505066	ORC3	Q9UBD5	711 aa	Predicted RBP	18.31	■□□□□ 0.52
DDR1-256	ENST00000505066	PCDHGC5	Q9Y5F6	944 aa		18.31	■□□□□ 0.52
DDR1-256	ENST00000505066	PFKFB2	O60825	505 aa		18.3	■□□□□ 0.52
DDR1-256	ENST00000505066	SRGAP2C	P0DJJ0	459 aa		18.3	■□□□□ 0.52
DDR1-256	ENST00000505066	BCAR1	P56945	870 aa		18.3	■□□□□ 0.52
DDR1-256	ENST00000505066	ITIH3	Q06033	890 aa		18.3	■□□□□ 0.52
DDR1-256	ENST00000505066	EPHA7	Q15375	998 aa		18.3	■□□□□ 0.52
DDR1-256	ENST00000505066	XKR9	Q5GH70	373 aa		18.3	■□□□□ 0.52
DDR1-256	ENST00000505066	NOMO2	Q5JPE7	1267 aa		18.3	■□□□□ 0.52
DDR1-256	ENST00000505066	ANKRD54	Q6NXT1	300 aa		18.3	■□□□□ 0.52
DDR1-256	ENST00000505066	SRGAP1	Q7Z6B7	1085 aa		18.3	■□□□□ 0.52
DDR1-256	ENST00000505066	CNNM3	Q8NE01	707 aa		18.3	■□□□□ 0.52
DDR1-256	ENST00000505066	RIPOR3	Q96MK2	946 aa		18.3	■□□□□ 0.52
DDR1-256	ENST00000505066	TRAIP	Q9BWF2	469 aa		18.3	■□□□□ 0.52
DDR1-256	ENST00000505066	UBN1	Q9NPG3	1134 aa		18.3	■□□□□ 0.52
DDR1-256	ENST00000505066	DZANK1	Q9NVP4	752 aa		18.3	■□□□□ 0.52
DDR1-256	ENST00000505066	NLRC5	Q86WI3	1866 aa		18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	IGKV6-21	A0A0C4DH24	114 aa		18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	CSDE1	O75534	798 aa	Known RBP	18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	YWHAB	P31946	246 aa	Known RBP	18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	SCRN1	Q12765	414 aa		18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	MXD4	Q14582	209 aa	Predicted RBP	18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	PCBP1	Q15365	356 aa	Known RBP eCLIP	18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	SAFB	Q15424	915 aa	Known RBP eCLIP	18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	CLLU1OS	Q5K130	101 aa		18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	PLA2G4F	Q68DD2	849 aa		18.29	■□□□□ 0.52

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