RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 TCEAL5Q5H9L2 206 aa28.32■■■□□ 2.12
PVT1-201ENST00000504719 ECHDC2Q86YB7 292 aa28.32■■■□□ 2.12
PVT1-201ENST00000504719 NEK9Q8TD19 979 aa28.32■■■□□ 2.12
PVT1-201ENST00000504719 UBE2ZQ9H832 354 aaPredicted RBP28.32■■■□□ 2.12
PVT1-201ENST00000504719 ALG13Q9NP73 1137 aaKnown RBP28.32■■■□□ 2.12
PVT1-201ENST00000504719 NLRP4Q96MN2 994 aa28.31■■■□□ 2.12
PVT1-201ENST00000504719 CHST12Q9NRB3 414 aa28.31■■■□□ 2.12
PVT1-201ENST00000504719 RNF19AQ9NV58 838 aa28.31■■■□□ 2.12
PVT1-201ENST00000504719 COL4A3BPQ9Y5P4 624 aa28.31■■■□□ 2.12
PVT1-201ENST00000504719 PLXNA4Q9HCM2 1894 aa28.31■■■□□ 2.12
PVT1-201ENST00000504719 GAS2O43903 313 aaKnown RBP28.3■■■□□ 2.12
PVT1-201ENST00000504719 ITGB1P05556 798 aa28.3■■■□□ 2.12
PVT1-201ENST00000504719 SFPQP23246 707 aaKnown RBP eCLIP28.3■■■□□ 2.126e-6■■□□□ 14.5
PVT1-201ENST00000504719 ORC2Q13416 577 aaPredicted RBP28.3■■■□□ 2.12
PVT1-201ENST00000504719 KLHL23Q8NBE8 558 aa28.3■■■□□ 2.12
PVT1-201ENST00000504719 SPPL3Q8TCT6 385 aa28.3■■■□□ 2.12
PVT1-201ENST00000504719 TMEM143Q96AN5 459 aa28.3■■■□□ 2.12
PVT1-201ENST00000504719 DACT1Q9NYF0 836 aa28.3■■■□□ 2.12
PVT1-201ENST00000504719 A0A0U1RQF3 1178 aa28.29■■■□□ 2.12
PVT1-201ENST00000504719 HOXA2O43364 376 aa28.29■■■□□ 2.12
PVT1-201ENST00000504719 CAMK1Q14012 370 aa28.29■■■□□ 2.12
PVT1-201ENST00000504719 EMC2Q15006 297 aa28.29■■■□□ 2.12
PVT1-201ENST00000504719 ZNF174Q15697 407 aa28.29■■■□□ 2.12
PVT1-201ENST00000504719 NOSTRINQ8IVI9 506 aa28.29■■■□□ 2.12
PVT1-201ENST00000504719 PRPF31Q8WWY3 499 aaKnown RBP28.29■■■□□ 2.12
PVT1-201ENST00000504719 PSPC1Q8WXF1 523 aaKnown RBP28.29■■■□□ 2.12
PVT1-201ENST00000504719 CASD1Q96PB1 797 aa28.29■■■□□ 2.12
PVT1-201ENST00000504719 UHRF1Q96T88 793 aaPredicted RBP28.29■■■□□ 2.12
PVT1-201ENST00000504719 TMEM117Q9H0C3 514 aa28.29■■■□□ 2.12
PVT1-201ENST00000504719 CWH43Q9H720 699 aa28.29■■■□□ 2.12
PVT1-201ENST00000504719 IFT122Q9HBG6 1241 aa28.29■■■□□ 2.12
PVT1-201ENST00000504719 BMP2KQ9NSY1 1161 aaPredicted RBP28.29■■■□□ 2.12
PVT1-201ENST00000504719 ANKEF1Q9NU02 776 aa28.29■■■□□ 2.12
PVT1-201ENST00000504719 TYW1Q9NV66 732 aaKnown RBP28.29■■■□□ 2.12
PVT1-201ENST00000504719 POTEMA6NI47 508 aa28.28■■■□□ 2.12
PVT1-201ENST00000504719 K7ELQ4 463 aaPredicted RBP28.28■■■□□ 2.12
PVT1-201ENST00000504719 SPOUT1Q5T280 376 aaKnown RBP28.28■■■□□ 2.12
PVT1-201ENST00000504719 ZNF598Q86UK7 904 aaKnown RBP28.28■■■□□ 2.12
PVT1-201ENST00000504719 TCP11Q8WWU5 503 aa28.28■■■□□ 2.12
PVT1-201ENST00000504719 MTRQ99707 1265 aa28.28■■■□□ 2.12
PVT1-201ENST00000504719 AAASQ9NRG9 546 aa28.28■■■□□ 2.12
PVT1-201ENST00000504719 TTC28Q96AY4 2481 aa28.27■■■□□ 2.12
PVT1-201ENST00000504719 EOMESO95936 686 aa28.27■■■□□ 2.12
PVT1-201ENST00000504719 DNAJB1P25685 340 aa28.27■■■□□ 2.12
PVT1-201ENST00000504719 LAMTOR4Q0VGL1 99 aa28.27■■■□□ 2.12
PVT1-201ENST00000504719 SNX21Q969T3 373 aa28.27■■■□□ 2.12
PVT1-201ENST00000504719 TRAIPQ9BWF2 469 aa28.27■■■□□ 2.12
PVT1-201ENST00000504719 XPNPEP1Q9NQW7 623 aa28.27■■■□□ 2.12
PVT1-201ENST00000504719 HCSTQ9UBK5 93 aa28.27■■■□□ 2.12
PVT1-201ENST00000504719 PCDHB12Q9Y5F1 795 aa28.27■■■□□ 2.12
PVT1-201ENST00000504719 H3BQV1 296 aa28.26■■■□□ 2.11
PVT1-201ENST00000504719 TNFRSF10AO00220 468 aa28.26■■■□□ 2.11
PVT1-201ENST00000504719 ASAP2O43150 1006 aa28.26■■■□□ 2.11
PVT1-201ENST00000504719 U2AF2P26368 475 aaKnown RBP eCLIP28.26■■■□□ 2.112e-7■■□□□ 11.9
PVT1-201ENST00000504719 TRAPPC10P48553 1259 aa28.26■■■□□ 2.11
PVT1-201ENST00000504719 COL19A1Q14993 1142 aa28.26■■■□□ 2.11
PVT1-201ENST00000504719 TTC38Q5R3I4 469 aa28.26■■■□□ 2.11
PVT1-201ENST00000504719 CATSPER4Q7RTX7 472 aa28.26■■■□□ 2.11
PVT1-201ENST00000504719 SRGAP1Q7Z6B7 1085 aa28.26■■■□□ 2.11
PVT1-201ENST00000504719 FERMT3Q86UX7 667 aa28.26■■■□□ 2.11
PVT1-201ENST00000504719 POF1BQ8WVV4 589 aa28.26■■■□□ 2.11
PVT1-201ENST00000504719 OR52Z1P0C646 297 aa28.25■■■□□ 2.11
PVT1-201ENST00000504719 SRGAP2CP0DJJ0 459 aa28.25■■■□□ 2.11
PVT1-201ENST00000504719 ATF7P17544 494 aaPredicted RBP28.25■■■□□ 2.11
PVT1-201ENST00000504719 LEXMQ3ZCV2 418 aa28.25■■■□□ 2.11
PVT1-201ENST00000504719 LARP1BQ659C4 914 aaKnown RBP28.25■■■□□ 2.11
PVT1-201ENST00000504719 MCTP1Q6DN14 999 aa28.25■■■□□ 2.11
PVT1-201ENST00000504719 LRRC55Q6ZSA7 311 aa28.25■■■□□ 2.11
PVT1-201ENST00000504719 COLGALT1Q8NBJ5 622 aa28.25■■■□□ 2.11
PVT1-201ENST00000504719 RNF169Q8NCN4 708 aa28.25■■■□□ 2.11
PVT1-201ENST00000504719 PABPC5Q96DU9 382 aaKnown RBP28.25■■■□□ 2.11
PVT1-201ENST00000504719 PIN4Q9Y237 131 aaKnown RBP28.25■■■□□ 2.11
PVT1-201ENST00000504719 CSPG5O95196 566 aa28.24■■■□□ 2.11
PVT1-201ENST00000504719 SPATA31C1P0DKV0 1188 aa28.24■■■□□ 2.11
PVT1-201ENST00000504719 XRCC6P12956 609 aaKnown RBP eCLIP28.24■■■□□ 2.112e-7■■■■□ 23.7
PVT1-201ENST00000504719 KCNA5P22460 613 aa28.24■■■□□ 2.11
PVT1-201ENST00000504719 TECP42680 631 aa28.24■■■□□ 2.11
PVT1-201ENST00000504719 PHKA2P46019 1235 aa28.24■■■□□ 2.11
PVT1-201ENST00000504719 RARRES1P49788 294 aa28.24■■■□□ 2.11
PVT1-201ENST00000504719 CLLU1OSQ5K130 101 aa28.24■■■□□ 2.11
PVT1-201ENST00000504719 ABI1Q8IZP0 508 aa28.24■■■□□ 2.11
PVT1-201ENST00000504719 NECAB3Q96P71 396 aaPredicted RBP28.24■■■□□ 2.11
PVT1-201ENST00000504719 TUFT1Q9NNX1 390 aa28.24■■■□□ 2.11
PVT1-201ENST00000504719 NOL7Q9UMY1 257 aaKnown RBP28.24■■■□□ 2.11
PVT1-201ENST00000504719 NCK2O43639 380 aa28.23■■■□□ 2.11
PVT1-201ENST00000504719 DGAT1O75907 488 aa28.23■■■□□ 2.11
PVT1-201ENST00000504719 LAG3P18627 525 aa28.23■■■□□ 2.11
PVT1-201ENST00000504719 HYAL1Q12794 435 aa28.23■■■□□ 2.11
PVT1-201ENST00000504719 CSPP1Q1MSJ5 1256 aa28.23■■■□□ 2.11
PVT1-201ENST00000504719 TWF2Q6IBS0 349 aaKnown RBP28.23■■■□□ 2.11
PVT1-201ENST00000504719 CATSPER3Q86XQ3 398 aa28.23■■■□□ 2.11
PVT1-201ENST00000504719 C4orf32Q8N8J7 132 aa28.23■■■□□ 2.11
PVT1-201ENST00000504719 PIGOQ8TEQ8 1089 aa28.23■■■□□ 2.11
PVT1-201ENST00000504719 POLR3CQ9BUI4 534 aaPredicted RBP28.23■■■□□ 2.11
PVT1-201ENST00000504719 MINDY3Q9H8M7 445 aa28.23■■■□□ 2.11
PVT1-201ENST00000504719 A0A087WWV3 80 aa28.22■■■□□ 2.11
PVT1-201ENST00000504719 MED24O75448 989 aa28.22■■■□□ 2.11
PVT1-201ENST00000504719 SKIP12755 728 aa28.22■■■□□ 2.11
PVT1-201ENST00000504719 IRS1P35568 1242 aa28.22■■■□□ 2.11
PVT1-201ENST00000504719 UBE3AQ05086 875 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms