RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 TFDP1Q14186 410 aa20.24■□□□□ 0.83
PDLIM7-209ENST00000503346 ZRSR1Q15695 479 aaKnown RBP20.24■□□□□ 0.83
PDLIM7-209ENST00000503346 FAM117BQ6P1L5 589 aa20.24■□□□□ 0.83
PDLIM7-209ENST00000503346 IFNLR1Q8IU57 520 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-209ENST00000503346 CRIPAKQ8N1N5 446 aa20.24■□□□□ 0.83
PDLIM7-209ENST00000503346 LINC00301Q8NCQ3 95 aa20.24■□□□□ 0.83
PDLIM7-209ENST00000503346 CDK5RAP3Q96JB5 506 aa20.24■□□□□ 0.83
PDLIM7-209ENST00000503346 ADAM2Q99965 735 aa20.24■□□□□ 0.83
PDLIM7-209ENST00000503346 CSRNP2Q9H175 543 aa20.24■□□□□ 0.83
PDLIM7-209ENST00000503346 GPRC5CQ9NQ84 441 aa20.24■□□□□ 0.83
PDLIM7-209ENST00000503346 MTMR10Q9NXD2 777 aa20.24■□□□□ 0.83
PDLIM7-209ENST00000503346 ARID2Q68CP9 1835 aa20.23■□□□□ 0.83
PDLIM7-209ENST00000503346 LCHNA4D1U4 455 aa20.23■□□□□ 0.83
PDLIM7-209ENST00000503346 C9IYK1 514 aa20.23■□□□□ 0.83
PDLIM7-209ENST00000503346 UPP2O95045 317 aa20.23■□□□□ 0.83
PDLIM7-209ENST00000503346 BRD1O95696 1058 aa20.23■□□□□ 0.83
PDLIM7-209ENST00000503346 PHKA2P46019 1235 aa20.23■□□□□ 0.83
PDLIM7-209ENST00000503346 SARSP49591 514 aaKnown RBP20.23■□□□□ 0.83
PDLIM7-209ENST00000503346 CAPSQ13938 189 aa20.23■□□□□ 0.83
PDLIM7-209ENST00000503346 PPP2R2DQ66LE6 453 aa20.23■□□□□ 0.83
PDLIM7-209ENST00000503346 ATL3Q6DD88 541 aa20.23■□□□□ 0.83
PDLIM7-209ENST00000503346 SLC24A5Q71RS6 500 aa20.23■□□□□ 0.83
PDLIM7-209ENST00000503346 MAEAQ7L5Y9 396 aa20.23■□□□□ 0.83
PDLIM7-209ENST00000503346 NPAS4Q8IUM7 802 aa20.23■□□□□ 0.83
PDLIM7-209ENST00000503346 SP7Q8TDD2 431 aaPredicted RBP20.23■□□□□ 0.83
PDLIM7-209ENST00000503346 NFKBIZQ9BYH8 718 aa20.23■□□□□ 0.83
PDLIM7-209ENST00000503346 CCSER1Q9C0I3 900 aa20.23■□□□□ 0.83
PDLIM7-209ENST00000503346 CHST12Q9NRB3 414 aa20.23■□□□□ 0.83
PDLIM7-209ENST00000503346 YEATS4O95619 227 aa20.22■□□□□ 0.83
PDLIM7-209ENST00000503346 ZSCAN20P17040 1043 aaPredicted RBP20.22■□□□□ 0.83
PDLIM7-209ENST00000503346 PTENP60484 403 aa20.22■□□□□ 0.83
PDLIM7-209ENST00000503346 FAM189BP81408 668 aa20.22■□□□□ 0.83
PDLIM7-209ENST00000503346 STK38Q15208 465 aa20.22■□□□□ 0.83
PDLIM7-209ENST00000503346 FAM102BQ5T8I3 360 aa20.22■□□□□ 0.83
PDLIM7-209ENST00000503346 KRI1Q8N9T8 703 aaKnown RBP20.22■□□□□ 0.83
PDLIM7-209ENST00000503346 CALML4Q96GE6 196 aa20.22■□□□□ 0.83
PDLIM7-209ENST00000503346 FAM161BQ96MY7 647 aa20.22■□□□□ 0.83
PDLIM7-209ENST00000503346 YME1L1Q96TA2 773 aa20.22■□□□□ 0.83
PDLIM7-209ENST00000503346 MINDY3Q9H8M7 445 aa20.22■□□□□ 0.83
PDLIM7-209ENST00000503346 RNF216Q9NWF9 866 aaPredicted RBP20.22■□□□□ 0.83
PDLIM7-209ENST00000503346 TFIP11Q9UBB9 837 aaKnown RBP20.22■□□□□ 0.83
PDLIM7-209ENST00000503346 ZDHHC9Q9Y397 364 aa20.22■□□□□ 0.83
PDLIM7-209ENST00000503346 PTPRSQ13332 1948 aa20.21■□□□□ 0.83
PDLIM7-209ENST00000503346 PPP6R2O75170 966 aa20.21■□□□□ 0.83
PDLIM7-209ENST00000503346 ARHGEF15O94989 841 aa20.21■□□□□ 0.83
PDLIM7-209ENST00000503346 STAG3L1P0CL83 205 aa20.21■□□□□ 0.83
PDLIM7-209ENST00000503346 TAP1Q03518 808 aa20.21■□□□□ 0.83
PDLIM7-209ENST00000503346 PCBP1Q15365 356 aaKnown RBP eCLIP20.21■□□□□ 0.834e-10■■■■■ 32.7
PDLIM7-209ENST00000503346 RINT1Q6NUQ1 792 aa20.21■□□□□ 0.83
PDLIM7-209ENST00000503346 CATSPER4Q7RTX7 472 aa20.21■□□□□ 0.83
PDLIM7-209ENST00000503346 SYT2Q8N9I0 419 aaPredicted RBP20.21■□□□□ 0.83
PDLIM7-209ENST00000503346 GUCD1Q96NT3 240 aa20.21■□□□□ 0.83
PDLIM7-209ENST00000503346 CLIC6Q96NY7 704 aa20.21■□□□□ 0.83
PDLIM7-209ENST00000503346 PLIN2Q99541 437 aa20.21■□□□□ 0.83
PDLIM7-209ENST00000503346 RC3H2Q9HBD1 1191 aaKnown RBP20.21■□□□□ 0.83
PDLIM7-209ENST00000503346 SPTLC2O15270 562 aa20.2■□□□□ 0.82
PDLIM7-209ENST00000503346 DGKIO75912 1065 aa20.2■□□□□ 0.82
PDLIM7-209ENST00000503346 PLA2G4BP0C869 781 aa20.2■□□□□ 0.82
PDLIM7-209ENST00000503346 SLC12A3P55017 1021 aa20.2■□□□□ 0.82
PDLIM7-209ENST00000503346 GRIN2CQ14957 1233 aa20.2■□□□□ 0.82
PDLIM7-209ENST00000503346 KARSQ15046 597 aaKnown RBP20.2■□□□□ 0.82
PDLIM7-209ENST00000503346 C1orf186Q6ZWK4 172 aa20.2■□□□□ 0.82
PDLIM7-209ENST00000503346 USP49Q70CQ1 688 aa20.2■□□□□ 0.82
PDLIM7-209ENST00000503346 LRRC15Q8TF66 581 aa20.2■□□□□ 0.82
PDLIM7-209ENST00000503346 SYMPKQ92797 1274 aaKnown RBP20.2■□□□□ 0.82
PDLIM7-209ENST00000503346 KIFAP3Q92845 792 aa20.2■□□□□ 0.82
PDLIM7-209ENST00000503346 ZNF689Q96CS4 500 aaPredicted RBP20.2■□□□□ 0.82
PDLIM7-209ENST00000503346 EPSTI1Q96J88 318 aa20.2■□□□□ 0.82
PDLIM7-209ENST00000503346 RUSC1Q9BVN2 902 aa20.2■□□□□ 0.82
PDLIM7-209ENST00000503346 TRAIPQ9BWF2 469 aa20.2■□□□□ 0.82
PDLIM7-209ENST00000503346 ELAC1Q9H777 363 aaKnown RBP20.2■□□□□ 0.82
PDLIM7-209ENST00000503346 AGPAT5Q9NUQ2 364 aa20.2■□□□□ 0.82
PDLIM7-209ENST00000503346 DACT1Q9NYF0 836 aa20.2■□□□□ 0.82
PDLIM7-209ENST00000503346 COL4A6Q14031 1691 aa20.19■□□□□ 0.82
PDLIM7-209ENST00000503346 LINC01553A4QN01 128 aa20.19■□□□□ 0.82
PDLIM7-209ENST00000503346 PLCG1P19174 1290 aa20.19■□□□□ 0.82
PDLIM7-209ENST00000503346 GUCY2CP25092 1073 aa20.19■□□□□ 0.82
PDLIM7-209ENST00000503346 NAMPTP43490 491 aa20.19■□□□□ 0.82
PDLIM7-209ENST00000503346 MBTD1Q05BQ5 628 aa20.19■□□□□ 0.82
PDLIM7-209ENST00000503346 FOXD4L6Q3SYB3 417 aaPredicted RBP20.19■□□□□ 0.82
PDLIM7-209ENST00000503346 SPECC1Q5M775 1068 aa20.19■□□□□ 0.82
PDLIM7-209ENST00000503346 CDCA2Q69YH5 1023 aaPredicted RBP20.19■□□□□ 0.82
PDLIM7-209ENST00000503346 FOXD4L3Q6VB84 417 aaPredicted RBP20.19■□□□□ 0.82
PDLIM7-209ENST00000503346 BSNDQ8WZ55 320 aa20.19■□□□□ 0.82
PDLIM7-209ENST00000503346 TIPINQ9BVW5 301 aa20.19■□□□□ 0.82
PDLIM7-209ENST00000503346 BLOC1S4Q9NUP1 217 aa20.19■□□□□ 0.82
PDLIM7-209ENST00000503346 TMEM161AQ9NX61 479 aa20.19■□□□□ 0.82
PDLIM7-209ENST00000503346 KCND2Q9NZV8 630 aa20.19■□□□□ 0.82
PDLIM7-209ENST00000503346 LRFN2Q9ULH4 789 aa20.19■□□□□ 0.82
PDLIM7-209ENST00000503346 PIN4Q9Y237 131 aaKnown RBP20.19■□□□□ 0.82
PDLIM7-209ENST00000503346 PCDHB7Q9Y5E2 793 aa20.19■□□□□ 0.82
PDLIM7-209ENST00000503346 CHD9Q3L8U1 2897 aa20.18■□□□□ 0.82
PDLIM7-209ENST00000503346 A0A0U1RQF3 1178 aa20.18■□□□□ 0.82
PDLIM7-209ENST00000503346 PPP2R5AQ15172 486 aa20.18■□□□□ 0.82
PDLIM7-209ENST00000503346 RASSF8Q8NHQ8 419 aa20.18■□□□□ 0.82
PDLIM7-209ENST00000503346 KCNG4Q8TDN1 519 aa20.18■□□□□ 0.82
PDLIM7-209ENST00000503346 CDX2Q99626 313 aaPredicted RBP20.18■□□□□ 0.82
PDLIM7-209ENST00000503346 DAXXQ9UER7 740 aaPredicted RBP20.18■□□□□ 0.82
PDLIM7-209ENST00000503346 CFAP45Q9UL16 551 aa20.18■□□□□ 0.82
PDLIM7-209ENST00000503346 TTC3P53804 2025 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms