RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 HOXA2O43364 376 aa25.32■■□□□ 1.64
CDKN2A-208ENST00000498124 DCXO43602 365 aa25.32■■□□□ 1.64
CDKN2A-208ENST00000498124 ALADP13716 330 aa25.32■■□□□ 1.64
CDKN2A-208ENST00000498124 ZSCAN20P17040 1043 aaPredicted RBP25.32■■□□□ 1.64
CDKN2A-208ENST00000498124 PBX3P40426 434 aa25.32■■□□□ 1.64
CDKN2A-208ENST00000498124 PPP2R5CQ13362 524 aa25.32■■□□□ 1.64
CDKN2A-208ENST00000498124 EARS2Q5JPH6 523 aaKnown RBP25.32■■□□□ 1.64
CDKN2A-208ENST00000498124 PLA2G4FQ68DD2 849 aa25.32■■□□□ 1.64
CDKN2A-208ENST00000498124 LRRC43Q8N309 656 aa25.32■■□□□ 1.64
CDKN2A-208ENST00000498124 SCLT1Q96NL6 688 aa25.32■■□□□ 1.64
CDKN2A-208ENST00000498124 PER2O15055 1255 aa25.31■■□□□ 1.64
CDKN2A-208ENST00000498124 MAFO75444 373 aaPredicted RBP25.31■■□□□ 1.64
CDKN2A-208ENST00000498124 PSMC5P62195 406 aa25.31■■□□□ 1.64
CDKN2A-208ENST00000498124 PLCB3Q01970 1234 aa25.31■■□□□ 1.64
CDKN2A-208ENST00000498124 DUSP6Q16828 381 aa25.31■■□□□ 1.64
CDKN2A-208ENST00000498124 PPP4R3AQ6IN85 833 aa25.31■■□□□ 1.64
CDKN2A-208ENST00000498124 NEK8Q86SG6 692 aa25.31■■□□□ 1.64
CDKN2A-208ENST00000498124 HAS1Q92839 578 aa25.31■■□□□ 1.64
CDKN2A-208ENST00000498124 TLE6Q9H808 572 aa25.31■■□□□ 1.64
CDKN2A-208ENST00000498124 WRAP73Q9P2S5 460 aaPredicted RBP25.31■■□□□ 1.64
CDKN2A-208ENST00000498124 LZTS1Q9Y250 596 aa25.31■■□□□ 1.64
CDKN2A-208ENST00000498124 A0A087WZ62 844 aa25.3■■□□□ 1.64
CDKN2A-208ENST00000498124 CCDC194A0A1B0GVG4 234 aa25.3■■□□□ 1.64
CDKN2A-208ENST00000498124 FAM205CA6NFA0 338 aa25.3■■□□□ 1.64
CDKN2A-208ENST00000498124 DDX11L8A8MPP1 907 aa25.3■■□□□ 1.64
CDKN2A-208ENST00000498124 PRR33A8MZF0 331 aa25.3■■□□□ 1.64
CDKN2A-208ENST00000498124 KCNT2Q6UVM3 1135 aa25.3■■□□□ 1.64
CDKN2A-208ENST00000498124 RNF169Q8NCN4 708 aa25.3■■□□□ 1.64
CDKN2A-208ENST00000498124 MRPS27Q92552 414 aaKnown RBP25.3■■□□□ 1.64
CDKN2A-208ENST00000498124 FAM20AQ96MK3 541 aa25.3■■□□□ 1.64
CDKN2A-208ENST00000498124 FDXACB1Q9BRP7 624 aaPredicted RBP25.3■■□□□ 1.64
CDKN2A-208ENST00000498124 GCOM2Q9BZD3 368 aaPredicted RBP25.3■■□□□ 1.64
CDKN2A-208ENST00000498124 KCNC3Q14003 757 aa25.29■■□□□ 1.64
CDKN2A-208ENST00000498124 PIK3AP1Q6ZUJ8 805 aa25.29■■□□□ 1.64
CDKN2A-208ENST00000498124 KSR1Q8IVT5 923 aa25.29■■□□□ 1.64
CDKN2A-208ENST00000498124 CCDC83Q8IWF9 413 aa25.29■■□□□ 1.64
CDKN2A-208ENST00000498124 ZNF579Q8NAF0 562 aaKnown RBP25.29■■□□□ 1.64
CDKN2A-208ENST00000498124 HELQQ8TDG4 1101 aa25.29■■□□□ 1.64
CDKN2A-208ENST00000498124 MICAL1Q8TDZ2 1067 aa25.29■■□□□ 1.64
CDKN2A-208ENST00000498124 POP1Q99575 1024 aaKnown RBP25.29■■□□□ 1.64
CDKN2A-208ENST00000498124 LLPHQ9BRT6 129 aaKnown RBP25.29■■□□□ 1.64
CDKN2A-208ENST00000498124 SUCLA2Q9P2R7 463 aaPredicted RBP25.29■■□□□ 1.64
CDKN2A-208ENST00000498124 HCN4Q9Y3Q4 1203 aa25.29■■□□□ 1.64
CDKN2A-208ENST00000498124 ARIH1Q9Y4X5 557 aaPredicted RBP25.29■■□□□ 1.64
CDKN2A-208ENST00000498124 CD2BP2O95400 341 aaKnown RBP25.28■■□□□ 1.64
CDKN2A-208ENST00000498124 EOMESO95936 686 aa25.28■■□□□ 1.64
CDKN2A-208ENST00000498124 FDPSP14324 419 aaKnown RBP25.28■■□□□ 1.64
CDKN2A-208ENST00000498124 GCFC2P16383 781 aaKnown RBP25.28■■□□□ 1.64
CDKN2A-208ENST00000498124 NPEPPSP55786 919 aa25.28■■□□□ 1.64
CDKN2A-208ENST00000498124 ST3GAL1Q11201 340 aa25.28■■□□□ 1.64
CDKN2A-208ENST00000498124 PLPP4Q5VZY2 271 aa25.28■■□□□ 1.64
CDKN2A-208ENST00000498124 ZNF410Q86VK4 478 aa25.28■■□□□ 1.64
CDKN2A-208ENST00000498124 ABI1Q8IZP0 508 aa25.28■■□□□ 1.64
CDKN2A-208ENST00000498124 WASF1Q92558 559 aa25.28■■□□□ 1.64
CDKN2A-208ENST00000498124 TNFRSF25Q93038 417 aa25.28■■□□□ 1.64
CDKN2A-208ENST00000498124 ZNF558Q96NG5 402 aa25.28■■□□□ 1.64
CDKN2A-208ENST00000498124 TRAIPQ9BWF2 469 aa25.28■■□□□ 1.64
CDKN2A-208ENST00000498124 CYP26B1Q9NR63 512 aa25.28■■□□□ 1.64
CDKN2A-208ENST00000498124 USP15Q9Y4E8 981 aaPredicted RBP25.28■■□□□ 1.64
CDKN2A-208ENST00000498124 ARID2Q68CP9 1835 aa25.28■■□□□ 1.64
CDKN2A-208ENST00000498124 MUC6Q6W4X9 2439 aa25.27■■□□□ 1.64
CDKN2A-208ENST00000498124 WDFY4Q6ZS81 3184 aa25.27■■□□□ 1.64
CDKN2A-208ENST00000498124 PHKA2P46019 1235 aa25.27■■□□□ 1.64
CDKN2A-208ENST00000498124 QARSP47897 775 aaKnown RBP25.27■■□□□ 1.64
CDKN2A-208ENST00000498124 CDC42EP1Q00587 391 aa25.27■■□□□ 1.64
CDKN2A-208ENST00000498124 SPIRE1Q08AE8 756 aa25.27■■□□□ 1.64
CDKN2A-208ENST00000498124 PDE12Q6L8Q7 609 aaKnown RBP25.27■■□□□ 1.64
CDKN2A-208ENST00000498124 POTEDQ86YR6 584 aa25.27■■□□□ 1.64
CDKN2A-208ENST00000498124 RHPN2Q8IUC4 686 aa25.27■■□□□ 1.64
CDKN2A-208ENST00000498124 NSUN7Q8NE18 718 aaKnown RBP25.27■■□□□ 1.64
CDKN2A-208ENST00000498124 TMX3Q96JJ7 454 aa25.27■■□□□ 1.64
CDKN2A-208ENST00000498124 CDCA3Q99618 268 aaPredicted RBP25.27■■□□□ 1.64
CDKN2A-208ENST00000498124 TCF25Q9BQ70 676 aa25.27■■□□□ 1.64
CDKN2A-208ENST00000498124 CHST12Q9NRB3 414 aa25.27■■□□□ 1.64
CDKN2A-208ENST00000498124 DACT1Q9NYF0 836 aa25.27■■□□□ 1.64
CDKN2A-208ENST00000498124 ORC3Q9UBD5 711 aaPredicted RBP25.27■■□□□ 1.64
CDKN2A-208ENST00000498124 MUTYHQ9UIF7 546 aa25.27■■□□□ 1.64
CDKN2A-208ENST00000498124 HIDE1A8MVS5 230 aa25.26■■□□□ 1.63
CDKN2A-208ENST00000498124 TBX3O15119 743 aa25.26■■□□□ 1.63
CDKN2A-208ENST00000498124 CCNT1O60563 726 aaKnown RBP25.26■■□□□ 1.63
CDKN2A-208ENST00000498124 SFPQP23246 707 aaKnown RBP eCLIP25.26■■□□□ 1.63
CDKN2A-208ENST00000498124 PPM1AP35813 382 aa25.26■■□□□ 1.63
CDKN2A-208ENST00000498124 DNM2P50570 870 aa25.26■■□□□ 1.63
CDKN2A-208ENST00000498124 NR5A1Q13285 461 aa25.26■■□□□ 1.63
CDKN2A-208ENST00000498124 SLC39A11Q8N1S5 342 aa25.26■■□□□ 1.63
CDKN2A-208ENST00000498124 FAM122AQ96E09 287 aa25.26■■□□□ 1.63
CDKN2A-208ENST00000498124 IFT122Q9HBG6 1241 aa25.26■■□□□ 1.63
CDKN2A-208ENST00000498124 XBP1P17861 261 aa25.25■■□□□ 1.63
CDKN2A-208ENST00000498124 HERC4Q5GLZ8 1057 aaPredicted RBP25.25■■□□□ 1.63
CDKN2A-208ENST00000498124 TMEM184AQ6ZMB5 413 aa25.25■■□□□ 1.63
CDKN2A-208ENST00000498124 RNF135Q8IUD6 432 aa25.25■■□□□ 1.63
CDKN2A-208ENST00000498124 SUSD6Q92537 303 aa25.25■■□□□ 1.63
CDKN2A-208ENST00000498124 NLRP4Q96MN2 994 aa25.25■■□□□ 1.63
CDKN2A-208ENST00000498124 DHX33Q9H6R0 707 aaKnown RBP25.25■■□□□ 1.63
CDKN2A-208ENST00000498124 SPG21Q9NZD8 308 aa25.25■■□□□ 1.63
CDKN2A-208ENST00000498124 MEIS3P2A8K0S8 358 aa25.24■■□□□ 1.63
CDKN2A-208ENST00000498124 LOC730098B7Z3J9 87 aa25.24■■□□□ 1.63
CDKN2A-208ENST00000498124 P4HBP07237 508 aaKnown RBP25.24■■□□□ 1.63
CDKN2A-208ENST00000498124 LPPQ93052 612 aa25.24■■□□□ 1.63
CDKN2A-208ENST00000498124 LXNQ9BS40 222 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms