RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 USP7Q93009 1102 aa6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 STRBPQ96SI9 672 aaKnown RBP6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 ELAC2Q9BQ52 826 aaKnown RBP6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 DBNDD2Q9BQY9 259 aa6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 HERPUD2Q9BSE4 406 aa6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 CCDC86Q9H6F5 360 aaKnown RBP6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 CACNA2D2Q9NY47 1150 aa6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 GTF2A1LQ9UNN4 478 aa6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 JAG2Q9Y219 1238 aa6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 HIF3AQ9Y2N7 669 aa6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 A0A0G2JMZ2 1700 aa6.9□□□□□ -1.31
TMEM39A-212ENST00000497993 CEP290O15078 2479 aa6.89□□□□□ -1.31
TMEM39A-212ENST00000497993 CLRN2A0PK11 232 aa6.89□□□□□ -1.31
TMEM39A-212ENST00000497993 F8W031 263 aaPredicted RBP6.89□□□□□ -1.31
TMEM39A-212ENST00000497993 GABRDO14764 452 aa6.89□□□□□ -1.31
TMEM39A-212ENST00000497993 H2AFB1P0C5Y9 115 aa6.89□□□□□ -1.31
TMEM39A-212ENST00000497993 H2AFB2P0C5Z0 115 aa6.89□□□□□ -1.31
TMEM39A-212ENST00000497993 GSTO1P78417 241 aa6.89□□□□□ -1.31
TMEM39A-212ENST00000497993 TMPRSS15P98073 1019 aa6.89□□□□□ -1.31
TMEM39A-212ENST00000497993 MECOMQ03112 1051 aa6.89□□□□□ -1.31
TMEM39A-212ENST00000497993 KIAA1211LQ6NV74 962 aa6.89□□□□□ -1.31
TMEM39A-212ENST00000497993 PKN3Q6P5Z2 889 aa6.89□□□□□ -1.31
TMEM39A-212ENST00000497993 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.89□□□□□ -1.31
TMEM39A-212ENST00000497993 LHFPL2Q6ZUX7 228 aa6.89□□□□□ -1.31
TMEM39A-212ENST00000497993 TTC17Q96AE7 1141 aa6.89□□□□□ -1.31
TMEM39A-212ENST00000497993 DCTPP1Q9H773 170 aa6.89□□□□□ -1.31
TMEM39A-212ENST00000497993 CBX8Q9HC52 389 aa6.89□□□□□ -1.31
TMEM39A-212ENST00000497993 TMOD2Q9NZR1 351 aa6.89□□□□□ -1.31
TMEM39A-212ENST00000497993 NRBP1Q9UHY1 535 aa6.89□□□□□ -1.31
TMEM39A-212ENST00000497993 POLR3KQ9Y2Y1 108 aaPredicted RBP6.89□□□□□ -1.31
TMEM39A-212ENST00000497993 ZSWIM8A7E2V4 1837 aa6.89□□□□□ -1.31
TMEM39A-212ENST00000497993 ZNFX1Q9P2E3 1918 aaKnown RBP6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 PLXNB2O15031 1838 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 SALL3Q9BXA9 1300 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 MANSC4A6NHS7 340 aaPredicted RBP6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 DHX15O43143 795 aaKnown RBP6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 ZEB2O60315 1214 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 LDHCP07864 332 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 ADH5P11766 374 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 FLT3P36888 993 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 PREPP48147 710 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 ZNF143P52747 638 aaPredicted RBP6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 SLC7A5Q01650 507 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 KIF23Q02241 960 aaPredicted RBP6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 SREBF2Q12772 1141 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 NFIAQ12857 509 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 CCDC158Q5M9N0 1113 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 PRAMEF18Q5VWM3 479 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 DCAF15Q66K64 600 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 UNC5AQ6ZN44 842 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 MOB2Q70IA6 237 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 ZNF354CQ86Y25 554 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 USP33Q8TEY7 942 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 UTP4Q969X6 686 aaKnown RBP6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 WNK4Q96J92 1243 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 MYRFLQ96LU7 910 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 AARSD1Q9BTE6 412 aaKnown RBP6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 WDR18Q9BV38 432 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 TMEM39BQ9GZU3 492 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 ANTXR1Q9H6X2 564 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 IFT22Q9H7X7 185 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 AS3MTQ9HBK9 375 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 VEZTQ9HBM0 779 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 ARHGEF4Q9NR80 690 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 IP6K2Q9UHH9 426 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 PNMA8BQ9ULN7 279 aaPredicted RBP6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 ANGEL1Q9UNK9 670 aaKnown RBP6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 APOBEC2Q9Y235 224 aaKnown RBP6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 EXOC6BQ9Y2D4 811 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 LUC7L2Q9Y383 392 aaKnown RBP6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 SNCAIPQ9Y6H5 919 aa6.88□□□□□ -1.31
TMEM39A-212ENST00000497993 UBE2Q2LH0YL09 131 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 ERC2O15083 957 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 SLC26A4O43511 780 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 GAS2O43903 313 aaKnown RBP6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 ZNF862O60290 1169 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 DNAJC8O75937 253 aaPredicted RBP6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 SNUPNO95149 360 aaKnown RBP6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 RBM5P52756 815 aaKnown RBP eCLIP6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 VGLL4Q14135 290 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 SAFBQ15424 915 aaKnown RBP eCLIP6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 SV2CQ496J9 727 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 COBLL1Q53SF7 1204 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 NKAPLQ5M9Q1 402 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 ERO1BQ86YB8 467 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 DZIP1Q86YF9 867 aaKnown RBP6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 ARMC10Q8N2F6 343 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 CLASRPQ8N2M8 674 aaKnown RBP6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 PI4K2BQ8TCG2 481 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 TIFAQ96CG3 184 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 NEUROD6Q96NK8 337 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 SCLT1Q96NL6 688 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 MENTQ9BUN1 341 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 TCF7L1Q9HCS4 588 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 NGRNQ9NPE2 291 aaKnown RBP6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 DDX4Q9NQI0 724 aaKnown RBP6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 RNF186Q9NXI6 227 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 GMIPQ9P107 970 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 LUZP4Q9P127 313 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 SCAF8Q9UPN6 1271 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms