RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 BRD1O95696 1058 aa24.53■■□□□ 1.52
CLIC4-204ENST00000497755 WEE2P0C1S8 567 aa24.53■■□□□ 1.52
CLIC4-204ENST00000497755 NUBP1P53384 320 aa24.53■■□□□ 1.52
CLIC4-204ENST00000497755 TBC1D8BQ0IIM8 1120 aa24.53■■□□□ 1.52
CLIC4-204ENST00000497755 NTRK3Q16288 839 aa24.53■■□□□ 1.52
CLIC4-204ENST00000497755 UBALD2Q8IYN6 164 aa24.53■■□□□ 1.52
CLIC4-204ENST00000497755 BICD2Q8TD16 824 aa24.53■■□□□ 1.52
CLIC4-204ENST00000497755 SLC5A5Q92911 643 aa24.53■■□□□ 1.52
CLIC4-204ENST00000497755 GJA10Q969M2 543 aa24.53■■□□□ 1.52
CLIC4-204ENST00000497755 CEP89Q96ST8 783 aa24.53■■□□□ 1.52
CLIC4-204ENST00000497755 MRPL9Q9BYD2 267 aaKnown RBP24.53■■□□□ 1.52
CLIC4-204ENST00000497755 UNC45AQ9H3U1 944 aa24.53■■□□□ 1.52
CLIC4-204ENST00000497755 CHST12Q9NRB3 414 aa24.53■■□□□ 1.52
CLIC4-204ENST00000497755 SORCS3Q9UPU3 1222 aa24.53■■□□□ 1.52
CLIC4-204ENST00000497755 DMDP11532 3685 aa24.53■■□□□ 1.52
CLIC4-204ENST00000497755 CHMP2AO43633 222 aa24.52■■□□□ 1.52
CLIC4-204ENST00000497755 GFRA3O60609 400 aa24.52■■□□□ 1.52
CLIC4-204ENST00000497755 GAS7O60861 476 aa24.52■■□□□ 1.52
CLIC4-204ENST00000497755 SFNP31947 248 aa24.52■■□□□ 1.52
CLIC4-204ENST00000497755 USP11P51784 963 aa24.52■■□□□ 1.52
CLIC4-204ENST00000497755 MTMR3Q13615 1198 aa24.52■■□□□ 1.52
CLIC4-204ENST00000497755 KANK3Q6NY19 840 aa24.52■■□□□ 1.52
CLIC4-204ENST00000497755 TMEM173Q86WV6 379 aaPredicted RBP24.52■■□□□ 1.52
CLIC4-204ENST00000497755 VPS52Q8N1B4 723 aa24.52■■□□□ 1.52
CLIC4-204ENST00000497755 C12orf76Q8N812 135 aaPredicted RBP24.52■■□□□ 1.52
CLIC4-204ENST00000497755 KCNB2Q92953 911 aa24.52■■□□□ 1.52
CLIC4-204ENST00000497755 TMEM169Q96HH4 297 aa24.52■■□□□ 1.52
CLIC4-204ENST00000497755 TRAIPQ9BWF2 469 aa24.52■■□□□ 1.52
CLIC4-204ENST00000497755 NIFKQ9BYG3 293 aaKnown RBP24.52■■□□□ 1.52
CLIC4-204ENST00000497755 SMOC2Q9H3U7 446 aa24.52■■□□□ 1.52
CLIC4-204ENST00000497755 NID2Q14112 1375 aa24.52■■□□□ 1.52
CLIC4-204ENST00000497755 STBD1O95210 358 aa24.51■■□□□ 1.51
CLIC4-204ENST00000497755 MTHFRP42898 656 aa24.51■■□□□ 1.51
CLIC4-204ENST00000497755 PHKA2P46019 1235 aa24.51■■□□□ 1.51
CLIC4-204ENST00000497755 JAK3P52333 1124 aa24.51■■□□□ 1.51
CLIC4-204ENST00000497755 BMS1Q14692 1282 aaKnown RBP24.51■■□□□ 1.51
CLIC4-204ENST00000497755 LRCH2Q5VUJ6 765 aa24.51■■□□□ 1.51
CLIC4-204ENST00000497755 AUTS2Q8WXX7 1259 aa24.51■■□□□ 1.51
CLIC4-204ENST00000497755 GCOM2Q9BZD3 368 aaPredicted RBP24.51■■□□□ 1.51
CLIC4-204ENST00000497755 ZBP1Q9H171 429 aa24.51■■□□□ 1.51
CLIC4-204ENST00000497755 IGKV6-21A0A0C4DH24 114 aa24.5■■□□□ 1.51
CLIC4-204ENST00000497755 GALR2O43603 387 aaPredicted RBP24.5■■□□□ 1.51
CLIC4-204ENST00000497755 CA8P35219 290 aa24.5■■□□□ 1.51
CLIC4-204ENST00000497755 CDC42EP1Q00587 391 aa24.5■■□□□ 1.51
CLIC4-204ENST00000497755 AKAP17AQ02040 695 aaKnown RBP24.5■■□□□ 1.51
CLIC4-204ENST00000497755 RARS2Q5T160 578 aaKnown RBP24.5■■□□□ 1.51
CLIC4-204ENST00000497755 FBXL16Q8N461 479 aa24.5■■□□□ 1.51
CLIC4-204ENST00000497755 TEKT3Q9BXF9 490 aa24.5■■□□□ 1.51
CLIC4-204ENST00000497755 VPS54Q9P1Q0 977 aa24.5■■□□□ 1.51
CLIC4-204ENST00000497755 IRAK3Q9Y616 596 aa24.5■■□□□ 1.51
CLIC4-204ENST00000497755 VPS13AQ96RL7 3174 aa24.5■■□□□ 1.51
CLIC4-204ENST00000497755 SPTBN4Q9H254 2564 aa24.49■■□□□ 1.51
CLIC4-204ENST00000497755 A0A087WZ62 844 aa24.49■■□□□ 1.51
CLIC4-204ENST00000497755 TMEM150BA6NC51 233 aa24.49■■□□□ 1.51
CLIC4-204ENST00000497755 PSMD10O75832 226 aa24.49■■□□□ 1.51
CLIC4-204ENST00000497755 ASGR2P07307 311 aa24.49■■□□□ 1.51
CLIC4-204ENST00000497755 EPCAMP16422 314 aa24.49■■□□□ 1.51
CLIC4-204ENST00000497755 LONRF3Q496Y0 759 aa24.49■■□□□ 1.51
CLIC4-204ENST00000497755 MTERF2Q49AM1 385 aa24.49■■□□□ 1.51
CLIC4-204ENST00000497755 ATAT1Q5SQI0 421 aa24.49■■□□□ 1.51
CLIC4-204ENST00000497755 DDX53Q86TM3 631 aaKnown RBP24.49■■□□□ 1.51
CLIC4-204ENST00000497755 ZDHHC14Q8IZN3 488 aa24.49■■□□□ 1.51
CLIC4-204ENST00000497755 TMEM105Q8N8V8 129 aa24.49■■□□□ 1.51
CLIC4-204ENST00000497755 SLC22A17Q8WUG5 538 aa24.49■■□□□ 1.51
CLIC4-204ENST00000497755 LPPQ93052 612 aa24.49■■□□□ 1.51
CLIC4-204ENST00000497755 IGSF21Q96ID5 467 aa24.49■■□□□ 1.51
CLIC4-204ENST00000497755 SNX27Q96L92 541 aa24.49■■□□□ 1.51
CLIC4-204ENST00000497755 JAKMIP1Q96N16 626 aaKnown RBP24.49■■□□□ 1.51
CLIC4-204ENST00000497755 SH2D3AQ9BRG2 576 aa24.49■■□□□ 1.51
CLIC4-204ENST00000497755 FDXACB1Q9BRP7 624 aaPredicted RBP24.49■■□□□ 1.51
CLIC4-204ENST00000497755 SLC26A6Q9BXS9 759 aa24.49■■□□□ 1.51
CLIC4-204ENST00000497755 RNF26Q9BY78 433 aaPredicted RBP24.49■■□□□ 1.51
CLIC4-204ENST00000497755 NRDE2Q9H7Z3 1164 aa24.49■■□□□ 1.51
CLIC4-204ENST00000497755 LIMD1Q9UGP4 676 aa24.49■■□□□ 1.51
CLIC4-204ENST00000497755 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.48■■□□□ 1.51
CLIC4-204ENST00000497755 FAM186AA6NE01 2351 aa24.48■■□□□ 1.51
CLIC4-204ENST00000497755 ZC3H11AO75152 810 aaKnown RBP eCLIP24.48■■□□□ 1.51
CLIC4-204ENST00000497755 CTSAP10619 480 aa24.48■■□□□ 1.51
CLIC4-204ENST00000497755 PLXNA3P51805 1871 aa24.48■■□□□ 1.51
CLIC4-204ENST00000497755 POLGP54098 1239 aaPredicted RBP24.48■■□□□ 1.51
CLIC4-204ENST00000497755 XKR3Q5GH77 459 aa24.48■■□□□ 1.51
CLIC4-204ENST00000497755 KIAA1841Q6NSI8 718 aa24.48■■□□□ 1.51
CLIC4-204ENST00000497755 B3GNT9Q6UX72 402 aa24.48■■□□□ 1.51
CLIC4-204ENST00000497755 CCDC148Q8NFR7 591 aa24.48■■□□□ 1.51
CLIC4-204ENST00000497755 RDM1Q8NG50 284 aa24.48■■□□□ 1.51
CLIC4-204ENST00000497755 FEZF2Q8TBJ5 459 aa24.48■■□□□ 1.51
CLIC4-204ENST00000497755 BCL7CQ8WUZ0 217 aaPredicted RBP24.48■■□□□ 1.51
CLIC4-204ENST00000497755 RSPH1Q8WYR4 309 aa24.48■■□□□ 1.51
CLIC4-204ENST00000497755 AGXT2Q9BYV1 514 aa24.48■■□□□ 1.51
CLIC4-204ENST00000497755 DZANK1Q9NVP4 752 aa24.48■■□□□ 1.51
CLIC4-204ENST00000497755 SEPT9Q9UHD8 586 aaPredicted RBP24.48■■□□□ 1.51
CLIC4-204ENST00000497755 MEIS3P2A8K0S8 358 aa24.47■■□□□ 1.51
CLIC4-204ENST00000497755 PROB1E7EW31 1015 aa24.47■■□□□ 1.51
CLIC4-204ENST00000497755 OFD1O75665 1012 aa24.47■■□□□ 1.51
CLIC4-204ENST00000497755 GALTP07902 379 aa24.47■■□□□ 1.51
CLIC4-204ENST00000497755 IFNAR1P17181 557 aa24.47■■□□□ 1.51
CLIC4-204ENST00000497755 DNM2P50570 870 aa24.47■■□□□ 1.51
CLIC4-204ENST00000497755 GIT2Q14161 759 aa24.47■■□□□ 1.51
CLIC4-204ENST00000497755 Q4G0T1 1027 aa24.47■■□□□ 1.51
CLIC4-204ENST00000497755 TWF2Q6IBS0 349 aaKnown RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms