RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 A6NJR5 290 aa13.37□□□□□ -0.27
HPS1-213ENST00000497527 PES1O00541 588 aaKnown RBP13.37□□□□□ -0.27
HPS1-213ENST00000497527 SLC16A4O15374 487 aa13.37□□□□□ -0.27
HPS1-213ENST00000497527 ASAP2O43150 1006 aa13.37□□□□□ -0.27
HPS1-213ENST00000497527 KPNA6O60684 536 aa13.37□□□□□ -0.27
HPS1-213ENST00000497527 IGHA2P01877 340 aa13.37□□□□□ -0.27
HPS1-213ENST00000497527 MSNP26038 577 aaKnown RBP13.37□□□□□ -0.27
HPS1-213ENST00000497527 MARK3P27448 753 aa13.37□□□□□ -0.27
HPS1-213ENST00000497527 CYP2C19P33261 490 aa13.37□□□□□ -0.27
HPS1-213ENST00000497527 UBXN1Q04323 297 aa13.37□□□□□ -0.27
HPS1-213ENST00000497527 TFDP1Q14186 410 aa13.37□□□□□ -0.27
HPS1-213ENST00000497527 ZC2HC1CQ53FD0 456 aaPredicted RBP13.37□□□□□ -0.27
HPS1-213ENST00000497527 TLK2Q86UE8 772 aa13.37□□□□□ -0.27
HPS1-213ENST00000497527 SLC9A9Q8IVB4 645 aa13.37□□□□□ -0.27
HPS1-213ENST00000497527 MAP4K3Q8IVH8 894 aa13.37□□□□□ -0.27
HPS1-213ENST00000497527 C2orf40Q9H1Z8 148 aa13.37□□□□□ -0.27
HPS1-213ENST00000497527 RNF186Q9NXI6 227 aa13.37□□□□□ -0.27
HPS1-213ENST00000497527 FLRT1Q9NZU1 646 aa13.37□□□□□ -0.27
HPS1-213ENST00000497527 ZMYM2Q9UBW7 1377 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 IGKV6-21A0A0C4DH24 114 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 DENND3A2RUS2 1198 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 H3BRB1 525 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 KIAA0391O15091 583 aaKnown RBP13.36□□□□□ -0.27
HPS1-213ENST00000497527 DYNC1LI2O43237 492 aaPredicted RBP13.36□□□□□ -0.27
HPS1-213ENST00000497527 TGFB1I1O43294 461 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 ECM2O94769 699 aaPredicted RBP13.36□□□□□ -0.27
HPS1-213ENST00000497527 SFPQP23246 707 aaKnown RBP eCLIP13.36□□□□□ -0.27
HPS1-213ENST00000497527 HOXD13P35453 343 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 PSMC2P35998 433 aaKnown RBP13.36□□□□□ -0.27
HPS1-213ENST00000497527 FLT3LGP49771 235 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 EFNA5P52803 228 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 STRN3Q13033 797 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 CCL14Q16627 93 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 VWA3BQ502W6 1294 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 GJC2Q5T442 439 aaPredicted RBP13.36□□□□□ -0.27
HPS1-213ENST00000497527 PPFIBP1Q86W92 1011 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 TRIM50Q86XT4 487 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 TMEM161BQ8NDZ6 487 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 DEPTORQ8TB45 409 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 PSPC1Q8WXF1 523 aaKnown RBP13.36□□□□□ -0.27
HPS1-213ENST00000497527 ERO1AQ96HE7 468 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 C16orf70Q9BSU1 422 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 NUP58Q9BVL2 599 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 KATNAL1Q9BW62 490 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 TUT1Q9H6E5 874 aaKnown RBP13.36□□□□□ -0.27
HPS1-213ENST00000497527 TMEM134Q9H6X4 195 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 SPC25Q9HBM1 224 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 AGPAT3Q9NRZ7 376 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 INTS13Q9NVM9 706 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 SAGE1Q9NXZ1 904 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 ARHGAP28Q9P2N2 729 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 ARMCX3Q9UH62 379 aaPredicted RBP13.36□□□□□ -0.27
HPS1-213ENST00000497527 TBX20Q9UMR3 447 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 FRMD4BQ9Y2L6 1034 aa13.36□□□□□ -0.27
HPS1-213ENST00000497527 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.36□□□□□ -0.27
HPS1-213ENST00000497527 RRN3P2A6NIE6 340 aa13.35□□□□□ -0.27
HPS1-213ENST00000497527 MAPK13O15264 365 aa13.35□□□□□ -0.27
HPS1-213ENST00000497527 DUSP11O75319 330 aaKnown RBP13.35□□□□□ -0.27
HPS1-213ENST00000497527 TRPA1O75762 1119 aa13.35□□□□□ -0.27
HPS1-213ENST00000497527 TBC1D8O95759 1140 aa13.35□□□□□ -0.27
HPS1-213ENST00000497527 PTGS1P23219 599 aa13.35□□□□□ -0.27
HPS1-213ENST00000497527 GLRA2P23416 452 aa13.35□□□□□ -0.27
HPS1-213ENST00000497527 TMOD1P28289 359 aa13.35□□□□□ -0.27
HPS1-213ENST00000497527 CTGFP29279 349 aa13.35□□□□□ -0.27
HPS1-213ENST00000497527 PBX1P40424 430 aa13.35□□□□□ -0.27
HPS1-213ENST00000497527 VEGFBP49765 207 aa13.35□□□□□ -0.27
HPS1-213ENST00000497527 PRMT2P55345 433 aa13.35□□□□□ -0.27
HPS1-213ENST00000497527 PRAMEF19Q5SWL8 479 aa13.35□□□□□ -0.27
HPS1-213ENST00000497527 TMEM63BQ5T3F8 832 aa13.35□□□□□ -0.27
HPS1-213ENST00000497527 ZSCAN30Q86W11 494 aa13.35□□□□□ -0.27
HPS1-213ENST00000497527 TRIM59Q8IWR1 403 aa13.35□□□□□ -0.27
HPS1-213ENST00000497527 ZBTB8OSQ8IWT0 167 aa13.35□□□□□ -0.27
HPS1-213ENST00000497527 CCDC112Q8NEF3 446 aa13.35□□□□□ -0.27
HPS1-213ENST00000497527 TMEM143Q96AN5 459 aa13.35□□□□□ -0.27
HPS1-213ENST00000497527 NDST4Q9H3R1 872 aa13.35□□□□□ -0.27
HPS1-213ENST00000497527 ZKSCAN5Q9Y2L8 839 aa13.35□□□□□ -0.27
HPS1-213ENST00000497527 LRRIQ4A6NIV6 560 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 CLIC2O15247 247 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 TEX33O43247 280 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 ZEB2O60315 1214 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 EXOC3O60645 756 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 CYBAP13498 195 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 INSRRP14616 1297 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 CDC42EP1Q00587 391 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 PRKCZQ05513 592 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 KCNA1Q09470 495 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 PPFIA1Q13136 1202 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 CEP135Q66GS9 1140 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 ARMCX5Q6P1M9 558 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 USP37Q86T82 979 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 CNGA4Q8IV77 575 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 BSNDQ8WZ55 320 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 CCDC51Q96ER9 411 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 ERGIC2Q96RQ1 377 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 ARHGAP39Q9C0H5 1083 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 SUGCTQ9HAC7 445 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 DMAC2Q9NW81 257 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 SRRDQ9UH36 339 aa13.34□□□□□ -0.27
HPS1-213ENST00000497527 ZBTB42B2RXF5 422 aa13.33□□□□□ -0.28
HPS1-213ENST00000497527 K7ERI5 159 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms