RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 PTENP60484 403 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 CYP4A11Q02928 519 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 LAMTOR4Q0VGL1 99 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 BTG3Q14201 252 aaPredicted RBP12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 FAM102BQ5T8I3 360 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 SRGAP1Q7Z6B7 1085 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 MRPL10Q7Z7H8 261 aaKnown RBP12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 ECHDC2Q86YB7 292 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 GDPD5Q8WTR4 605 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 TCP11Q8WWU5 503 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 CASD1Q96PB1 797 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 ASB2Q96Q27 587 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 COL25A1Q9BXS0 654 aaPredicted RBP12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 CWH43Q9H720 699 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 MINDY3Q9H8M7 445 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 COG5Q9UP83 839 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 PLAGL2Q9UPG8 496 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 KIF3AQ9Y496 699 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 PCDHB7Q9Y5E2 793 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 PCDHB6Q9Y5E3 794 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 COL4A3BPQ9Y5P4 624 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 MARCH6O60337 910 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 CSDE1O75534 798 aaKnown RBP12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 GJB2P29033 226 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 TECP42680 631 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 GATMP50440 423 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 FOSBP53539 338 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 PTGDRQ13258 359 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 GPM6BQ13491 265 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 MXD4Q14582 209 aaPredicted RBP12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 EMC2Q15006 297 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 ECM1Q16610 540 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 AMHR2Q16671 573 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 CTC1Q2NKJ3 1217 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 RILPL1Q5EBL4 403 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 XKR9Q5GH70 373 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 LRRC55Q6ZSA7 311 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 RHPN2Q8IUC4 686 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 KCTD17Q8N5Z5 321 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 SPPL3Q8TCT6 385 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 PSPC1Q8WXF1 523 aaKnown RBP12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 TMEM143Q96AN5 459 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 NACC1Q96RE7 527 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 C11orf84Q9BUA3 381 aaPredicted RBP12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 TMEM117Q9H0C3 514 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 AGPAT5Q9NUQ2 364 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 DACT1Q9NYF0 836 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 THEGQ9P2T0 379 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 MTUS1Q9ULD2 1270 aa12.16□□□□□ -0.46
SHROOM3-210ENST00000497440 DENND3A2RUS2 1198 aa12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 GRM6O15303 877 aa12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 INPPL1O15357 1258 aa12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 ZSCAN20P17040 1043 aaPredicted RBP12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 FGFR4P22455 802 aa12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 GLRA2P23416 452 aa12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 DNAJB1P25685 340 aa12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 PHKA2P46019 1235 aa12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 POLGP54098 1239 aaPredicted RBP12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 ATP2C1P98194 919 aaPredicted RBP12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 NBR1Q14596 966 aa12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 CCDC85BQ15834 202 aaPredicted RBP12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 TJAP1Q5JTD0 557 aa12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 CLLU1OSQ5K130 101 aa12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 UBXN11Q5T124 520 aa12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 PIGOQ8TEQ8 1089 aa12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 NLRP7Q8WX94 980 aa12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 INTS4Q96HW7 963 aaKnown RBP12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 ZNF668Q96K58 619 aaPredicted RBP12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 PPP1R16BQ96T49 567 aa12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 MMTAG2Q9BU76 263 aaKnown RBP12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 ATP6V0A4Q9HBG4 840 aa12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 NOL7Q9UMY1 257 aaKnown RBP12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 ATG2AQ2TAZ0 1938 aa12.15□□□□□ -0.46
SHROOM3-210ENST00000497440 KIAA1671Q9BY89 1806 aa12.14□□□□□ -0.47
SHROOM3-210ENST00000497440 DLL1O00548 723 aa12.14□□□□□ -0.47
SHROOM3-210ENST00000497440 HOXA2O43364 376 aa12.14□□□□□ -0.47
SHROOM3-210ENST00000497440 ITGB1P05556 798 aa12.14□□□□□ -0.47
SHROOM3-210ENST00000497440 CYP11B2P19099 503 aa12.14□□□□□ -0.47
SHROOM3-210ENST00000497440 ATP2B1P20020 1258 aa12.14□□□□□ -0.47
SHROOM3-210ENST00000497440 SFPQP23246 707 aaKnown RBP eCLIP12.14□□□□□ -0.47
SHROOM3-210ENST00000497440 MRPS5P82675 430 aaKnown RBP12.14□□□□□ -0.47
SHROOM3-210ENST00000497440 PLCB3Q01970 1234 aa12.14□□□□□ -0.47
SHROOM3-210ENST00000497440 UBE3AQ05086 875 aa12.14□□□□□ -0.47
SHROOM3-210ENST00000497440 PTPROQ16827 1216 aa12.14□□□□□ -0.47
SHROOM3-210ENST00000497440 HYIQ5T013 277 aa12.14□□□□□ -0.47
SHROOM3-210ENST00000497440 MTRQ99707 1265 aa12.14□□□□□ -0.47
SHROOM3-210ENST00000497440 TYW1Q9NV66 732 aaKnown RBP12.14□□□□□ -0.47
SHROOM3-210ENST00000497440 DAXXQ9UER7 740 aaPredicted RBP12.14□□□□□ -0.47
SHROOM3-210ENST00000497440 STK24Q9Y6E0 443 aa12.14□□□□□ -0.47
SHROOM3-210ENST00000497440 A0A087WWV3 80 aa12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 FGFR1P11362 822 aa12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 SKIP12755 728 aa12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 LTBRP36941 435 aa12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 MAPK8IP2Q13387 824 aaPredicted RBP12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 CAPSQ13938 189 aa12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 FAM187BQ17R55 369 aa12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 LARP1BQ659C4 914 aaKnown RBP12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 ARL6IP4Q66PJ3 421 aaKnown RBP12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 CDCA2Q69YH5 1023 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms