RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 C8orf34Q49A92 452 aa16.89■□□□□ 0.29
NEK4-206ENST00000496822 ZNF598Q86UK7 904 aaKnown RBP16.89■□□□□ 0.29
NEK4-206ENST00000496822 ZNF410Q86VK4 478 aa16.89■□□□□ 0.29
NEK4-206ENST00000496822 C4orf19Q8IY42 314 aa16.89■□□□□ 0.29
NEK4-206ENST00000496822 SLFN12Q8IYM2 578 aa16.89■□□□□ 0.29
NEK4-206ENST00000496822 TMEM143Q96AN5 459 aa16.89■□□□□ 0.29
NEK4-206ENST00000496822 DHX33Q9H6R0 707 aaKnown RBP16.89■□□□□ 0.29
NEK4-206ENST00000496822 PCDHB12Q9Y5F1 795 aa16.89■□□□□ 0.29
NEK4-206ENST00000496822 A0A0U1RQF3 1178 aa16.88■□□□□ 0.29
NEK4-206ENST00000496822 DKC1O60832 514 aaKnown RBP eCLIP16.88■□□□□ 0.29
NEK4-206ENST00000496822 FGF18O76093 207 aa16.88■□□□□ 0.29
NEK4-206ENST00000496822 LAG3P18627 525 aa16.88■□□□□ 0.29
NEK4-206ENST00000496822 SFPQP23246 707 aaKnown RBP eCLIP16.88■□□□□ 0.29
NEK4-206ENST00000496822 YWHABP31946 246 aaKnown RBP16.88■□□□□ 0.29
NEK4-206ENST00000496822 POLGP54098 1239 aaPredicted RBP16.88■□□□□ 0.29
NEK4-206ENST00000496822 TRIM29Q14134 588 aa16.88■□□□□ 0.29
NEK4-206ENST00000496822 CALCRLQ16602 461 aa16.88■□□□□ 0.29
NEK4-206ENST00000496822 THNSL1Q8IYQ7 743 aa16.88■□□□□ 0.29
NEK4-206ENST00000496822 LRRC43Q8N309 656 aa16.88■□□□□ 0.29
NEK4-206ENST00000496822 HELQQ8TDG4 1101 aa16.88■□□□□ 0.29
NEK4-206ENST00000496822 SLC7A3Q8WY07 619 aa16.88■□□□□ 0.29
NEK4-206ENST00000496822 KIF2CQ99661 725 aa16.88■□□□□ 0.29
NEK4-206ENST00000496822 JPH2Q9BR39 696 aaPredicted RBP16.88■□□□□ 0.29
NEK4-206ENST00000496822 EPHX3Q9H6B9 360 aa16.88■□□□□ 0.29
NEK4-206ENST00000496822 IFT122Q9HBG6 1241 aa16.88■□□□□ 0.29
NEK4-206ENST00000496822 AAASQ9NRG9 546 aa16.88■□□□□ 0.29
NEK4-206ENST00000496822 LIMCH1Q9UPQ0 1083 aa16.88■□□□□ 0.29
NEK4-206ENST00000496822 PIN4Q9Y237 131 aaKnown RBP16.88■□□□□ 0.29
NEK4-206ENST00000496822 COL4A3BPQ9Y5P4 624 aa16.88■□□□□ 0.29
NEK4-206ENST00000496822 HOXA2O43364 376 aa16.87■□□□□ 0.29
NEK4-206ENST00000496822 NCK2O43639 380 aa16.87■□□□□ 0.29
NEK4-206ENST00000496822 NEMFO60524 1076 aa16.87■□□□□ 0.29
NEK4-206ENST00000496822 BAG4O95429 457 aaKnown RBP16.87■□□□□ 0.29
NEK4-206ENST00000496822 NRIP1P48552 1158 aa16.87■□□□□ 0.29
NEK4-206ENST00000496822 ERVFC1P60507 584 aa16.87■□□□□ 0.29
NEK4-206ENST00000496822 CDC42EP1Q00587 391 aa16.87■□□□□ 0.29
NEK4-206ENST00000496822 ADAM15Q13444 863 aa16.87■□□□□ 0.29
NEK4-206ENST00000496822 EMC2Q15006 297 aa16.87■□□□□ 0.29
NEK4-206ENST00000496822 RBM23Q86U06 439 aaKnown RBP16.87■□□□□ 0.29
NEK4-206ENST00000496822 ABI1Q8IZP0 508 aa16.87■□□□□ 0.29
NEK4-206ENST00000496822 EIF2AK1Q9BQI3 630 aaKnown RBP16.87■□□□□ 0.29
NEK4-206ENST00000496822 TMEM60Q9H2L4 133 aa16.87■□□□□ 0.29
NEK4-206ENST00000496822 ZSWIM4Q9H7M6 989 aa16.87■□□□□ 0.29
NEK4-206ENST00000496822 TLR9Q9NR96 1032 aa16.87■□□□□ 0.29
NEK4-206ENST00000496822 ARID2Q68CP9 1835 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 SLITRK3O94933 977 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 GLP2RO95838 553 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 RFC5P40937 340 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 PHKA2P46019 1235 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 UBE3AQ05086 875 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 PUS10Q3MIT2 529 aaKnown RBP16.86■□□□□ 0.29
NEK4-206ENST00000496822 LONRF3Q496Y0 759 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 XKR9Q5GH70 373 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 KCNT2Q6UVM3 1135 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 CATSPER4Q7RTX7 472 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 TPH2Q8IWU9 490 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 GJD3Q8N144 294 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 EFHBQ8N7U6 833 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 PRPF31Q8WWY3 499 aaKnown RBP16.86■□□□□ 0.29
NEK4-206ENST00000496822 PSPC1Q8WXF1 523 aaKnown RBP16.86■□□□□ 0.29
NEK4-206ENST00000496822 LPPQ93052 612 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 MTMR9Q96QG7 549 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 TTC12Q9H892 705 aaPredicted RBP16.86■□□□□ 0.29
NEK4-206ENST00000496822 MINDY3Q9H8M7 445 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 XPNPEP1Q9NQW7 623 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 CHST12Q9NRB3 414 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 DACT1Q9NYF0 836 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 RAPGEFL1Q9UHV5 662 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 PCDHA12Q9UN75 941 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 PPME1Q9Y570 386 aa16.86■□□□□ 0.29
NEK4-206ENST00000496822 POTEMA6NI47 508 aa16.85■□□□□ 0.29
NEK4-206ENST00000496822 MEIS3P2A8K0S8 358 aa16.85■□□□□ 0.29
NEK4-206ENST00000496822 FSCN2O14926 492 aa16.85■□□□□ 0.29
NEK4-206ENST00000496822 PER2O15055 1255 aa16.85■□□□□ 0.29
NEK4-206ENST00000496822 MBTPS2O43462 519 aa16.85■□□□□ 0.29
NEK4-206ENST00000496822 EOMESO95936 686 aa16.85■□□□□ 0.29
NEK4-206ENST00000496822 ATP2B1P20020 1258 aa16.85■□□□□ 0.29
NEK4-206ENST00000496822 TXKP42681 527 aa16.85■□□□□ 0.29
NEK4-206ENST00000496822 NDUFV1P49821 464 aa16.85■□□□□ 0.29
NEK4-206ENST00000496822 RBM10P98175 930 aaKnown RBP16.85■□□□□ 0.29
NEK4-206ENST00000496822 LAMTOR4Q0VGL1 99 aa16.85■□□□□ 0.29
NEK4-206ENST00000496822 CSPP1Q1MSJ5 1256 aa16.85■□□□□ 0.29
NEK4-206ENST00000496822 TWF2Q6IBS0 349 aaKnown RBP16.85■□□□□ 0.29
NEK4-206ENST00000496822 PPP2R3CQ969Q6 453 aa16.85■□□□□ 0.29
NEK4-206ENST00000496822 MSLNLQ96KJ4 702 aa16.85■□□□□ 0.29
NEK4-206ENST00000496822 ZNF558Q96NG5 402 aa16.85■□□□□ 0.29
NEK4-206ENST00000496822 HSD17B14Q9BPX1 270 aa16.85■□□□□ 0.29
NEK4-206ENST00000496822 TRAIPQ9BWF2 469 aa16.85■□□□□ 0.29
NEK4-206ENST00000496822 INO80BQ9C086 356 aaPredicted RBP16.85■□□□□ 0.29
NEK4-206ENST00000496822 CLEC1BQ9P126 229 aa16.85■□□□□ 0.29
NEK4-206ENST00000496822 BARX2Q9UMQ3 279 aaPredicted RBP16.85■□□□□ 0.29
NEK4-206ENST00000496822 SRGAP2CP0DJJ0 459 aa16.84■□□□□ 0.29
NEK4-206ENST00000496822 COL9A1P20849 921 aa16.84■□□□□ 0.29
NEK4-206ENST00000496822 SSTR3P32745 418 aaPredicted RBP16.84■□□□□ 0.29
NEK4-206ENST00000496822 MCM7P33993 719 aa16.84■□□□□ 0.29
NEK4-206ENST00000496822 ZP2Q05996 745 aa16.84■□□□□ 0.29
NEK4-206ENST00000496822 PLPP4Q5VZY2 271 aa16.84■□□□□ 0.29
NEK4-206ENST00000496822 OTUD6AQ7L8S5 288 aa16.84■□□□□ 0.29
NEK4-206ENST00000496822 VN1R2Q8NFZ6 395 aa16.84■□□□□ 0.29
NEK4-206ENST00000496822 MICAL1Q8TDZ2 1067 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms