RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 ATP9AO75110 1047 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 BAG4O95429 457 aaKnown RBP11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 BRD1O95696 1058 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 GGPS1O95749 300 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 GH1P01241 217 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 KCNA2P16389 499 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 MCM7P33993 719 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 DDIT3P35638 169 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 TOB1P50616 345 aaPredicted RBP11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 SP2Q02086 613 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 PTK7Q13308 1070 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 ZNF174Q15697 407 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 TMEM63BQ5T3F8 832 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 TLK2Q86UE8 772 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 DHX37Q8IY37 1157 aaKnown RBP11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 OR6J1Q8NGC5 347 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 COPS5Q92905 334 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 DEFB118Q96PH6 123 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 SDF4Q9BRK5 362 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 AP5M1Q9H0R1 490 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 MLXIPQ9HAP2 919 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 SPC25Q9HBM1 224 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 AGO4Q9HCK5 861 aaKnown RBP11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 XPNPEP3Q9NQH7 507 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 TCEAL9Q9UHQ7 104 aa11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 GNEQ9Y223 722 aaKnown RBP11.41□□□□□ -0.58
RAB11FIP3-211ENST00000495663 NFASCO94856 1347 aa11.4□□□□□ -0.58
RAB11FIP3-211ENST00000495663 DYNC1LI2O43237 492 aaPredicted RBP11.4□□□□□ -0.58
RAB11FIP3-211ENST00000495663 GJB1P08034 283 aa11.4□□□□□ -0.58
RAB11FIP3-211ENST00000495663 ARHGAP1Q07960 439 aa11.4□□□□□ -0.58
RAB11FIP3-211ENST00000495663 CALCRLQ16602 461 aa11.4□□□□□ -0.58
RAB11FIP3-211ENST00000495663 BRDTQ58F21 947 aaPredicted RBP11.4□□□□□ -0.58
RAB11FIP3-211ENST00000495663 CELF3Q5SZQ8 465 aaKnown RBP11.4□□□□□ -0.58
RAB11FIP3-211ENST00000495663 GJC2Q5T442 439 aaPredicted RBP11.4□□□□□ -0.58
RAB11FIP3-211ENST00000495663 METTL7BQ6UX53 244 aa11.4□□□□□ -0.58
RAB11FIP3-211ENST00000495663 CYFIP1Q7L576 1253 aa11.4□□□□□ -0.58
RAB11FIP3-211ENST00000495663 SLFN12Q8IYM2 578 aa11.4□□□□□ -0.58
RAB11FIP3-211ENST00000495663 ETNPPLQ8TBG4 499 aa11.4□□□□□ -0.58
RAB11FIP3-211ENST00000495663 LENG1Q96BZ8 264 aaPredicted RBP11.4□□□□□ -0.58
RAB11FIP3-211ENST00000495663 FAM20AQ96MK3 541 aa11.4□□□□□ -0.58
RAB11FIP3-211ENST00000495663 SEMA6BQ9H3T3 888 aa11.4□□□□□ -0.58
RAB11FIP3-211ENST00000495663 TBC1D22BQ9NU19 505 aa11.4□□□□□ -0.58
RAB11FIP3-211ENST00000495663 PCDHB6Q9Y5E3 794 aa11.4□□□□□ -0.58
RAB11FIP3-211ENST00000495663 ATP6V1DQ9Y5K8 247 aa11.4□□□□□ -0.58
RAB11FIP3-211ENST00000495663 WDR81Q562E7 1941 aa11.4□□□□□ -0.58
RAB11FIP3-211ENST00000495663 SYNRGQ9UMZ2 1314 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 LAD1O00515 517 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 SORBS3O60504 671 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 GAS7O60861 476 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 FARP2O94887 1054 aaPredicted RBP11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 SGPL1O95470 568 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 C6orf222P0C671 652 aaPredicted RBP11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 NID1P14543 1247 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 CAPN2P17655 700 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 CPT1AP50416 773 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 GJA9P57773 515 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 ITGB3BPQ13352 177 aaPredicted RBP11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 TMEM132AQ24JP5 1023 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 LRCH2Q5VUJ6 765 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 FAM173BQ6P4H8 233 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 RNF180Q86T96 592 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 U2AF1L4Q8WU68 220 aaKnown RBP11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 SLC5A5Q92911 643 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 ZNF396Q96N95 335 aaPredicted RBP11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 RIT2Q99578 217 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 TEKT3Q9BXF9 490 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 UPF3AQ9H1J1 476 aaKnown RBP11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 JPH1Q9HDC5 661 aaPredicted RBP11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 KCNMB3Q9NPA1 279 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 SLC9A2Q9UBY0 812 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 CEP131Q9UPN4 1083 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 ZDHHC9Q9Y397 364 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 TCHHQ07283 1943 aa11.39□□□□□ -0.59
RAB11FIP3-211ENST00000495663 DDX39AO00148 427 aaKnown RBP11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 NOP56O00567 594 aaKnown RBP11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 ADAMTS4O75173 837 aa11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 PSMD10O75832 226 aa11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 BMP15O95972 392 aa11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 PGK1P00558 417 aa11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 OR52Z1P0C646 297 aa11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 PTGS1P23219 599 aa11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 GJA8P48165 433 aa11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 NKX3-2P78367 333 aa11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 SF3A1Q15459 793 aaKnown RBP11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 FSCN1Q16658 493 aaKnown RBP11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 ARRDC4Q8NCT1 418 aa11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 PPTC7Q8NI37 304 aa11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 HAS1Q92839 578 aa11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 ABHD8Q96I13 439 aa11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 SPATA33Q96N06 139 aa11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 MTMR9Q96QG7 549 aa11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 UIMC1Q96RL1 719 aa11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 TMEM60Q9H2L4 133 aa11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 BCAS3Q9H6U6 928 aa11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 PRDM6Q9NQX0 595 aa11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 CHMP5Q9NZZ3 219 aa11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 OGDHLQ9ULD0 1010 aa11.38□□□□□ -0.59
RAB11FIP3-211ENST00000495663 MYH9P35579 1960 aaKnown RBP11.37□□□□□ -0.59
RAB11FIP3-211ENST00000495663 ELP1O95163 1332 aa11.37□□□□□ -0.59
RAB11FIP3-211ENST00000495663 A6NJR5 290 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms