RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 BCAR1P56945 870 aa10.84□□□□□ -0.67
UBR4-216ENST00000494503 FAM189BP81408 668 aa10.84□□□□□ -0.67
UBR4-216ENST00000494503 SYCE2Q6PIF2 218 aa10.84□□□□□ -0.67
UBR4-216ENST00000494503 FAM43BQ6ZT52 329 aaPredicted RBP10.84□□□□□ -0.67
UBR4-216ENST00000494503 CENPQQ7L2Z9 268 aaPredicted RBP10.84□□□□□ -0.67
UBR4-216ENST00000494503 BMP8AQ7Z5Y6 402 aa10.84□□□□□ -0.67
UBR4-216ENST00000494503 RHPN2Q8IUC4 686 aa10.84□□□□□ -0.67
UBR4-216ENST00000494503 VPS52Q8N1B4 723 aa10.84□□□□□ -0.67
UBR4-216ENST00000494503 KREMEN2Q8NCW0 462 aa10.84□□□□□ -0.67
UBR4-216ENST00000494503 AUTS2Q8WXX7 1259 aa10.84□□□□□ -0.67
UBR4-216ENST00000494503 SUSD6Q92537 303 aa10.84□□□□□ -0.67
UBR4-216ENST00000494503 LPPQ93052 612 aa10.84□□□□□ -0.67
UBR4-216ENST00000494503 MFSD1Q9H3U5 465 aa10.84□□□□□ -0.67
UBR4-216ENST00000494503 DBR1Q9UK59 544 aaKnown RBP10.84□□□□□ -0.67
UBR4-216ENST00000494503 HCFC2Q9Y5Z7 792 aa10.84□□□□□ -0.67
UBR4-216ENST00000494503 CACNA1HO95180 2353 aa10.84□□□□□ -0.67
UBR4-216ENST00000494503 A0A087WZ62 844 aa10.83□□□□□ -0.68
UBR4-216ENST00000494503 C2orf71A6NGG8 1288 aa10.83□□□□□ -0.68
UBR4-216ENST00000494503 SSBP05455 408 aaKnown RBP eCLIP10.83□□□□□ -0.68
UBR4-216ENST00000494503 RPS6KB1P23443 525 aa10.83□□□□□ -0.68
UBR4-216ENST00000494503 PSMA5P28066 241 aa10.83□□□□□ -0.68
UBR4-216ENST00000494503 DRP2Q13474 957 aa10.83□□□□□ -0.68
UBR4-216ENST00000494503 MTMR3Q13615 1198 aa10.83□□□□□ -0.68
UBR4-216ENST00000494503 TSGA10IPQ3SY00 556 aa10.83□□□□□ -0.68
UBR4-216ENST00000494503 GLB1LQ6UWU2 654 aa10.83□□□□□ -0.68
UBR4-216ENST00000494503 CATSPER4Q7RTX7 472 aa10.83□□□□□ -0.68
UBR4-216ENST00000494503 SLC39A11Q8N1S5 342 aa10.83□□□□□ -0.68
UBR4-216ENST00000494503 ZNF710Q8N1W2 664 aa10.83□□□□□ -0.68
UBR4-216ENST00000494503 C12orf76Q8N812 135 aaPredicted RBP10.83□□□□□ -0.68
UBR4-216ENST00000494503 TDRD5Q8NAT2 981 aaKnown RBP10.83□□□□□ -0.68
UBR4-216ENST00000494503 TBCKQ8TEA7 893 aa10.83□□□□□ -0.68
UBR4-216ENST00000494503 CRYGNQ8WXF5 182 aa10.83□□□□□ -0.68
UBR4-216ENST00000494503 LENG9Q96B70 501 aa10.83□□□□□ -0.68
UBR4-216ENST00000494503 RIPOR3Q96MK2 946 aa10.83□□□□□ -0.68
UBR4-216ENST00000494503 RIT2Q99578 217 aa10.83□□□□□ -0.68
UBR4-216ENST00000494503 FDXACB1Q9BRP7 624 aaPredicted RBP10.83□□□□□ -0.68
UBR4-216ENST00000494503 RNF26Q9BY78 433 aaPredicted RBP10.83□□□□□ -0.68
UBR4-216ENST00000494503 S1PR5Q9H228 398 aa10.83□□□□□ -0.68
UBR4-216ENST00000494503 POMKQ9H5K3 350 aa10.83□□□□□ -0.68
UBR4-216ENST00000494503 BMP2KQ9NSY1 1161 aaPredicted RBP10.83□□□□□ -0.68
UBR4-216ENST00000494503 RNF19AQ9NV58 838 aa10.83□□□□□ -0.68
UBR4-216ENST00000494503 SUCLA2Q9P2R7 463 aaPredicted RBP10.83□□□□□ -0.68
UBR4-216ENST00000494503 SNX14Q9Y5W7 946 aa10.83□□□□□ -0.68
UBR4-216ENST00000494503 A0A0U1RQF3 1178 aa10.82□□□□□ -0.68
UBR4-216ENST00000494503 C2CD4DB7Z1M9 353 aa10.82□□□□□ -0.68
UBR4-216ENST00000494503 H0Y858 1186 aa10.82□□□□□ -0.68
UBR4-216ENST00000494503 MARCH6O60337 910 aa10.82□□□□□ -0.68
UBR4-216ENST00000494503 CLASP2O75122 1294 aaKnown RBP10.82□□□□□ -0.68
UBR4-216ENST00000494503 TDP2O95551 362 aa10.82□□□□□ -0.68
UBR4-216ENST00000494503 EOMESO95936 686 aa10.82□□□□□ -0.68
UBR4-216ENST00000494503 PDGFBP01127 241 aaPredicted RBP10.82□□□□□ -0.68
UBR4-216ENST00000494503 ASGR2P07307 311 aa10.82□□□□□ -0.68
UBR4-216ENST00000494503 CIITAP33076 1130 aa10.82□□□□□ -0.68
UBR4-216ENST00000494503 ITIH3Q06033 890 aa10.82□□□□□ -0.68
UBR4-216ENST00000494503 SSRP1Q08945 709 aaKnown RBP10.82□□□□□ -0.68
UBR4-216ENST00000494503 TCF15Q12870 199 aa10.82□□□□□ -0.68
UBR4-216ENST00000494503 STK3Q13188 491 aa10.82□□□□□ -0.68
UBR4-216ENST00000494503 XKR3Q5GH77 459 aa10.82□□□□□ -0.68
UBR4-216ENST00000494503 PLA2G4FQ68DD2 849 aa10.82□□□□□ -0.68
UBR4-216ENST00000494503 TMEM184AQ6ZMB5 413 aa10.82□□□□□ -0.68
UBR4-216ENST00000494503 CABP7Q86V35 215 aa10.82□□□□□ -0.68
UBR4-216ENST00000494503 MRPL43Q8N983 215 aaKnown RBP10.82□□□□□ -0.68
UBR4-216ENST00000494503 URGCPQ8TCY9 931 aa10.82□□□□□ -0.68
UBR4-216ENST00000494503 SLC5A5Q92911 643 aa10.82□□□□□ -0.68
UBR4-216ENST00000494503 NECTIN4Q96NY8 510 aa10.82□□□□□ -0.68
UBR4-216ENST00000494503 FAM193BQ96PV7 902 aaPredicted RBP10.82□□□□□ -0.68
UBR4-216ENST00000494503 LARP6Q9BRS8 491 aaKnown RBP10.82□□□□□ -0.68
UBR4-216ENST00000494503 ZFHX2Q9C0A1 2572 aaPredicted RBP10.81□□□□□ -0.68
UBR4-216ENST00000494503 GFRA3O60609 400 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 SKIP12755 728 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 EPCAMP16422 314 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 IFNAR1P17181 557 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 AVPR2P30518 371 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 MTHFRP42898 656 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 PHKA2P46019 1235 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 USP11P51784 963 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 NOMO2Q5JPE7 1267 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 ATAT1Q5SQI0 421 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 KANK3Q6NY19 840 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 CPLX2Q6PUV4 134 aaKnown RBP10.81□□□□□ -0.68
UBR4-216ENST00000494503 TMC5Q6UXY8 1006 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 TMEM173Q86WV6 379 aaPredicted RBP10.81□□□□□ -0.68
UBR4-216ENST00000494503 KSR1Q8IVT5 923 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 LINC01465Q8N7H1 131 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 ASIC4Q96FT7 647 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 C22orf23Q9BZE7 217 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 INO80BQ9C086 356 aaPredicted RBP10.81□□□□□ -0.68
UBR4-216ENST00000494503 ADAM7Q9H2U9 754 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 SMOC2Q9H3U7 446 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 CHST12Q9NRB3 414 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 FAM105AQ9NUU6 356 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 DDX25Q9UHL0 483 aaKnown RBP10.81□□□□□ -0.68
UBR4-216ENST00000494503 PCDHA4Q9UN74 947 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 SORCS3Q9UPU3 1222 aa10.81□□□□□ -0.68
UBR4-216ENST00000494503 PTPRZ1P23471 2315 aaPredicted RBP10.81□□□□□ -0.68
UBR4-216ENST00000494503 C2CD2LO14523 706 aa10.8□□□□□ -0.68
UBR4-216ENST00000494503 REC8O95072 547 aa10.8□□□□□ -0.68
UBR4-216ENST00000494503 BRD1O95696 1058 aa10.8□□□□□ -0.68
UBR4-216ENST00000494503 SRGAP2CP0DJJ0 459 aa10.8□□□□□ -0.68
UBR4-216ENST00000494503 MYBP10242 640 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms