RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 U2AF2P26368 475 aaKnown RBP eCLIP14.72□□□□□ -0.051e-7■□□□□ 8.7
ERCC3-209ENST00000494464 GATMP50440 423 aa14.72□□□□□ -0.05
ERCC3-209ENST00000494464 GNL2Q13823 731 aaKnown RBP14.72□□□□□ -0.05
ERCC3-209ENST00000494464 EMC2Q15006 297 aa14.72□□□□□ -0.05
ERCC3-209ENST00000494464 PAN2Q504Q3 1202 aaKnown RBP14.72□□□□□ -0.05
ERCC3-209ENST00000494464 NAALADL2Q58DX5 795 aa14.72□□□□□ -0.05
ERCC3-209ENST00000494464 XKR9Q5GH70 373 aa14.72□□□□□ -0.05
ERCC3-209ENST00000494464 TTC38Q5R3I4 469 aa14.72□□□□□ -0.05
ERCC3-209ENST00000494464 TPH2Q8IWU9 490 aa14.72□□□□□ -0.05
ERCC3-209ENST00000494464 ZNF579Q8NAF0 562 aaKnown RBP14.72□□□□□ -0.05
ERCC3-209ENST00000494464 TCP11Q8WWU5 503 aa14.72□□□□□ -0.05
ERCC3-209ENST00000494464 PSPC1Q8WXF1 523 aaKnown RBP14.72□□□□□ -0.05
ERCC3-209ENST00000494464 FDXACB1Q9BRP7 624 aaPredicted RBP14.72□□□□□ -0.05
ERCC3-209ENST00000494464 ATP6V0A4Q9HBG4 840 aa14.72□□□□□ -0.05
ERCC3-209ENST00000494464 ANKEF1Q9NU02 776 aa14.72□□□□□ -0.05
ERCC3-209ENST00000494464 DACT1Q9NYF0 836 aa14.72□□□□□ -0.05
ERCC3-209ENST00000494464 NOL7Q9UMY1 257 aaKnown RBP14.72□□□□□ -0.05
ERCC3-209ENST00000494464 COL4A3BPQ9Y5P4 624 aa14.72□□□□□ -0.05
ERCC3-209ENST00000494464 PLXNA4Q9HCM2 1894 aa14.71□□□□□ -0.05
ERCC3-209ENST00000494464 HOXA2O43364 376 aa14.71□□□□□ -0.06
ERCC3-209ENST00000494464 PDIA4P13667 645 aaKnown RBP14.71□□□□□ -0.06
ERCC3-209ENST00000494464 ATP2B1P20020 1258 aa14.71□□□□□ -0.06
ERCC3-209ENST00000494464 ECHDC2Q86YB7 292 aa14.71□□□□□ -0.06
ERCC3-209ENST00000494464 HLA-CQ95604 372 aa14.71□□□□□ -0.06
ERCC3-209ENST00000494464 NLRP4Q96MN2 994 aa14.71□□□□□ -0.06
ERCC3-209ENST00000494464 TRAIPQ9BWF2 469 aa14.71□□□□□ -0.06
ERCC3-209ENST00000494464 IFT122Q9HBG6 1241 aa14.71□□□□□ -0.06
ERCC3-209ENST00000494464 CHST12Q9NRB3 414 aa14.71□□□□□ -0.06
ERCC3-209ENST00000494464 ZDHHC9Q9Y397 364 aa14.71□□□□□ -0.06
ERCC3-209ENST00000494464 A0A0U1RQF3 1178 aa14.7□□□□□ -0.06
ERCC3-209ENST00000494464 GOLGA6L22H0YM25 854 aa14.7□□□□□ -0.06
ERCC3-209ENST00000494464 IBSPP21815 317 aaPredicted RBP14.7□□□□□ -0.06
ERCC3-209ENST00000494464 FGFR4P22455 802 aa14.7□□□□□ -0.06
ERCC3-209ENST00000494464 TFF2Q03403 129 aa14.7□□□□□ -0.06
ERCC3-209ENST00000494464 PKP1Q13835 747 aa14.7□□□□□ -0.06
ERCC3-209ENST00000494464 FAM102BQ5T8I3 360 aa14.7□□□□□ -0.06
ERCC3-209ENST00000494464 KSR1Q8IVT5 923 aa14.7□□□□□ -0.06
ERCC3-209ENST00000494464 PRPF31Q8WWY3 499 aaKnown RBP14.7□□□□□ -0.06
ERCC3-209ENST00000494464 MTRQ99707 1265 aa14.7□□□□□ -0.06
ERCC3-209ENST00000494464 TMEM117Q9H0C3 514 aa14.7□□□□□ -0.06
ERCC3-209ENST00000494464 NSUN3Q9H649 340 aaKnown RBP14.7□□□□□ -0.06
ERCC3-209ENST00000494464 TUFT1Q9NNX1 390 aa14.7□□□□□ -0.06
ERCC3-209ENST00000494464 XPNPEP1Q9NQW7 623 aa14.7□□□□□ -0.06
ERCC3-209ENST00000494464 RNF19AQ9NV58 838 aa14.7□□□□□ -0.06
ERCC3-209ENST00000494464 SMC3Q9UQE7 1217 aa14.7□□□□□ -0.06
ERCC3-209ENST00000494464 CUL9Q8IWT3 2517 aa14.69□□□□□ -0.06
ERCC3-209ENST00000494464 TBKBP1A7MCY6 615 aa14.69□□□□□ -0.06
ERCC3-209ENST00000494464 ZBTB39O15060 712 aa14.69□□□□□ -0.06
ERCC3-209ENST00000494464 GRM6O15303 877 aa14.69□□□□□ -0.06
ERCC3-209ENST00000494464 ASAP2O43150 1006 aa14.69□□□□□ -0.06
ERCC3-209ENST00000494464 CSDE1O75534 798 aaKnown RBP14.69□□□□□ -0.06
ERCC3-209ENST00000494464 DGAT1O75907 488 aa14.69□□□□□ -0.06
ERCC3-209ENST00000494464 EOMESO95936 686 aa14.69□□□□□ -0.06
ERCC3-209ENST00000494464 FGFR1P11362 822 aa14.69□□□□□ -0.06
ERCC3-209ENST00000494464 XRCC6P12956 609 aaKnown RBP eCLIP14.69□□□□□ -0.06
ERCC3-209ENST00000494464 RARRES1P49788 294 aa14.69□□□□□ -0.06
ERCC3-209ENST00000494464 COL19A1Q14993 1142 aa14.69□□□□□ -0.06
ERCC3-209ENST00000494464 ZNF174Q15697 407 aa14.69□□□□□ -0.06
ERCC3-209ENST00000494464 SRGAP1Q7Z6B7 1085 aa14.69□□□□□ -0.06
ERCC3-209ENST00000494464 ZNF598Q86UK7 904 aaKnown RBP14.69□□□□□ -0.06
ERCC3-209ENST00000494464 FERMT3Q86UX7 667 aa14.69□□□□□ -0.06
ERCC3-209ENST00000494464 RSPH1Q8WYR4 309 aa14.69□□□□□ -0.06
ERCC3-209ENST00000494464 TMEM143Q96AN5 459 aa14.69□□□□□ -0.06
ERCC3-209ENST00000494464 CCDC43Q96MW1 224 aaKnown RBP14.69□□□□□ -0.06
ERCC3-209ENST00000494464 POLR3CQ9BUI4 534 aaPredicted RBP14.69□□□□□ -0.06
ERCC3-209ENST00000494464 AAASQ9NRG9 546 aa14.69□□□□□ -0.06
ERCC3-209ENST00000494464 AGPAT5Q9NUQ2 364 aa14.69□□□□□ -0.06
ERCC3-209ENST00000494464 PLAGL2Q9UPG8 496 aa14.69□□□□□ -0.06
ERCC3-209ENST00000494464 MUC3AQ02505 3323 aa14.69□□□□□ -0.06
ERCC3-209ENST00000494464 ITGB1P05556 798 aa14.68□□□□□ -0.06
ERCC3-209ENST00000494464 SPATA31C1P0DKV0 1188 aa14.68□□□□□ -0.06
ERCC3-209ENST00000494464 ATF7P17544 494 aaPredicted RBP14.68□□□□□ -0.06
ERCC3-209ENST00000494464 MUTP22033 750 aa14.68□□□□□ -0.06
ERCC3-209ENST00000494464 FXR2P51116 673 aaKnown RBP eCLIP14.68□□□□□ -0.06
ERCC3-209ENST00000494464 LAMTOR4Q0VGL1 99 aa14.68□□□□□ -0.06
ERCC3-209ENST00000494464 MXD4Q14582 209 aaPredicted RBP14.68□□□□□ -0.06
ERCC3-209ENST00000494464 CSPP1Q1MSJ5 1256 aa14.68□□□□□ -0.06
ERCC3-209ENST00000494464 CATSPER4Q7RTX7 472 aa14.68□□□□□ -0.06
ERCC3-209ENST00000494464 LRRC43Q8N309 656 aa14.68□□□□□ -0.06
ERCC3-209ENST00000494464 CASD1Q96PB1 797 aa14.68□□□□□ -0.06
ERCC3-209ENST00000494464 UBE2ZQ9H832 354 aaPredicted RBP14.68□□□□□ -0.06
ERCC3-209ENST00000494464 BMP2KQ9NSY1 1161 aaPredicted RBP14.68□□□□□ -0.06
ERCC3-209ENST00000494464 PIN4Q9Y237 131 aaKnown RBP14.68□□□□□ -0.06
ERCC3-209ENST00000494464 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.67□□□□□ -0.06
ERCC3-209ENST00000494464 MED24O75448 989 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 SKIP12755 728 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 BMP1P13497 986 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 LAG3P18627 525 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 RPA1P27694 616 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 GJB2P29033 226 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 TECP42680 631 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 PHKA2P46019 1235 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 TOB1P50616 345 aaPredicted RBP14.67□□□□□ -0.06
ERCC3-209ENST00000494464 RAB27AP51159 221 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 UBE3AQ05086 875 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 POU5F1BQ06416 359 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 PCBP1Q15365 356 aaKnown RBP eCLIP14.67□□□□□ -0.06
ERCC3-209ENST00000494464 TCEAL5Q5H9L2 206 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 CLLU1OSQ5K130 101 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 HAUS3Q68CZ6 603 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms