RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 CALUO43852 315 aaPredicted RBP22.67■■□□□ 1.22
KPNA1-210ENST00000494339 HMGCRP04035 888 aa22.67■■□□□ 1.22
KPNA1-210ENST00000494339 MYL3P08590 195 aa22.67■■□□□ 1.22
KPNA1-210ENST00000494339 C6orf222P0C671 652 aaPredicted RBP22.67■■□□□ 1.22
KPNA1-210ENST00000494339 GTF2BQ00403 316 aa22.67■■□□□ 1.22
KPNA1-210ENST00000494339 MKRN4PQ13434 485 aaPredicted RBP22.67■■□□□ 1.22
KPNA1-210ENST00000494339 EDRF1Q3B7T1 1238 aa22.67■■□□□ 1.22
KPNA1-210ENST00000494339 METTL13Q8N6R0 699 aa22.67■■□□□ 1.22
KPNA1-210ENST00000494339 SLC17A8Q8NDX2 589 aa22.67■■□□□ 1.22
KPNA1-210ENST00000494339 ANKRD20A12PQ8NF67 263 aa22.67■■□□□ 1.22
KPNA1-210ENST00000494339 ST6GALNAC4Q9H4F1 302 aa22.67■■□□□ 1.22
KPNA1-210ENST00000494339 LIMA1Q9UHB6 759 aaKnown RBP22.67■■□□□ 1.22
KPNA1-210ENST00000494339 HTTP42858 3142 aa22.66■■□□□ 1.22
KPNA1-210ENST00000494339 IGKV6-21A0A0C4DH24 114 aa22.66■■□□□ 1.22
KPNA1-210ENST00000494339 DENND3A2RUS2 1198 aa22.66■■□□□ 1.22
KPNA1-210ENST00000494339 CLIC2O15247 247 aa22.66■■□□□ 1.22
KPNA1-210ENST00000494339 FGFR1OPO95684 399 aaKnown RBP22.66■■□□□ 1.22
KPNA1-210ENST00000494339 F2P00734 622 aa22.66■■□□□ 1.22
KPNA1-210ENST00000494339 FAM114A1Q8IWE2 563 aa22.66■■□□□ 1.22
KPNA1-210ENST00000494339 EXOC8Q8IYI6 725 aa22.66■■□□□ 1.22
KPNA1-210ENST00000494339 KAT2BQ92831 832 aa22.66■■□□□ 1.22
KPNA1-210ENST00000494339 TAB2Q9NYJ8 693 aa22.66■■□□□ 1.22
KPNA1-210ENST00000494339 LRRIQ4A6NIV6 560 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 C22orf31O95567 290 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 PGK1P00558 417 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 RARBP10826 455 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 NR2F2P24468 414 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 EEF1GP26641 437 aaKnown RBP22.65■■□□□ 1.22
KPNA1-210ENST00000494339 PPFIA1Q13136 1202 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 ADAM9Q13443 819 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 ARHGEF6Q15052 776 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 PTPN21Q16825 1174 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 KIAA0753Q2KHM9 967 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 EFCAB12Q6NXP0 572 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 PPP1R13LQ8WUF5 828 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 PRPF31Q8WWY3 499 aaKnown RBP22.65■■□□□ 1.22
KPNA1-210ENST00000494339 ACCSQ96QU6 501 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 CTAGE1Q96RT6 745 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 JPH2Q9BR39 696 aaPredicted RBP22.65■■□□□ 1.22
KPNA1-210ENST00000494339 GBP3Q9H0R5 595 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 INTS13Q9NVM9 706 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 ZKSCAN5Q9Y2L8 839 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 GAS2O43903 313 aaKnown RBP22.65■■□□□ 1.22
KPNA1-210ENST00000494339 KLRC1P26715 233 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 CLCN3P51790 818 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 PPP2R5AQ15172 486 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 IER5Q5VY09 327 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 TCP11Q8WWU5 503 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 VPS16Q9H269 839 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 TMEM206Q9H813 350 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 TBX20Q9UMR3 447 aa22.65■■□□□ 1.22
KPNA1-210ENST00000494339 NR3C1P04150 777 aa22.64■■□□□ 1.21
KPNA1-210ENST00000494339 NAMPTP43490 491 aa22.64■■□□□ 1.21
KPNA1-210ENST00000494339 COPB1P53618 953 aaKnown RBP22.64■■□□□ 1.21
KPNA1-210ENST00000494339 GRIK4Q16099 956 aa22.64■■□□□ 1.21
KPNA1-210ENST00000494339 GNASQ5JWF2 1037 aa22.64■■□□□ 1.21
KPNA1-210ENST00000494339 HS2ST1Q7LGA3 356 aa22.64■■□□□ 1.21
KPNA1-210ENST00000494339 PXYLP1Q8TE99 480 aa22.64■■□□□ 1.21
KPNA1-210ENST00000494339 PSPC1Q8WXF1 523 aaKnown RBP22.64■■□□□ 1.21
KPNA1-210ENST00000494339 ARHGAP28Q9P2N2 729 aa22.64■■□□□ 1.21
KPNA1-210ENST00000494339 COL1A2P08123 1366 aa22.64■■□□□ 1.21
KPNA1-210ENST00000494339 A0A1B0GTH6 734 aa22.63■■□□□ 1.21
KPNA1-210ENST00000494339 LRRC10BA6NIK2 292 aa22.63■■□□□ 1.21
KPNA1-210ENST00000494339 MSNP26038 577 aaKnown RBP22.63■■□□□ 1.21
KPNA1-210ENST00000494339 GJA9P57773 515 aa22.63■■□□□ 1.21
KPNA1-210ENST00000494339 CAPSQ13938 189 aa22.63■■□□□ 1.21
KPNA1-210ENST00000494339 MFSD10Q14728 455 aa22.63■■□□□ 1.21
KPNA1-210ENST00000494339 RETREG2Q8NC44 543 aa22.63■■□□□ 1.21
KPNA1-210ENST00000494339 DEPTORQ8TB45 409 aa22.63■■□□□ 1.21
KPNA1-210ENST00000494339 CEP63Q96MT8 703 aa22.63■■□□□ 1.21
KPNA1-210ENST00000494339 AGPAT3Q9NRZ7 376 aa22.63■■□□□ 1.21
KPNA1-210ENST00000494339 SUCLA2Q9P2R7 463 aaPredicted RBP22.63■■□□□ 1.21
KPNA1-210ENST00000494339 TRIM17Q9Y577 477 aa22.63■■□□□ 1.21
KPNA1-210ENST00000494339 TISP43B9A030 160 aa22.63■■□□□ 1.21
KPNA1-210ENST00000494339 CETN3O15182 167 aa22.63■■□□□ 1.21
KPNA1-210ENST00000494339 GJB1P08034 283 aa22.63■■□□□ 1.21
KPNA1-210ENST00000494339 MTIF2P46199 727 aaKnown RBP22.63■■□□□ 1.21
KPNA1-210ENST00000494339 FILIP1LQ4L180 1135 aa22.63■■□□□ 1.21
KPNA1-210ENST00000494339 ZC3H3Q8IXZ2 948 aaKnown RBP22.63■■□□□ 1.21
KPNA1-210ENST00000494339 SPC25Q9HBM1 224 aa22.63■■□□□ 1.21
KPNA1-210ENST00000494339 SETD4Q9NVD3 440 aa22.63■■□□□ 1.21
KPNA1-210ENST00000494339 IMPACTQ9P2X3 320 aa22.63■■□□□ 1.21
KPNA1-210ENST00000494339 KCNG1Q9UIX4 513 aa22.63■■□□□ 1.21
KPNA1-210ENST00000494339 N4BP3O15049 544 aa22.62■■□□□ 1.21
KPNA1-210ENST00000494339 PRKCSHP14314 528 aaPredicted RBP22.62■■□□□ 1.21
KPNA1-210ENST00000494339 PURAQ00577 322 aaKnown RBP22.62■■□□□ 1.21
KPNA1-210ENST00000494339 LAMTOR4Q0VGL1 99 aa22.62■■□□□ 1.21
KPNA1-210ENST00000494339 NR1I3Q14994 352 aa22.62■■□□□ 1.21
KPNA1-210ENST00000494339 MAP3K21Q5TCX8 1036 aa22.62■■□□□ 1.21
KPNA1-210ENST00000494339 RHPN2Q8IUC4 686 aa22.62■■□□□ 1.21
KPNA1-210ENST00000494339 TUBGCP2Q9BSJ2 902 aa22.62■■□□□ 1.21
KPNA1-210ENST00000494339 XPNPEP3Q9NQH7 507 aa22.62■■□□□ 1.21
KPNA1-210ENST00000494339 MAGEB2O15479 319 aa22.61■■□□□ 1.21
KPNA1-210ENST00000494339 TEX33O43247 280 aa22.61■■□□□ 1.21
KPNA1-210ENST00000494339 MYCNP04198 464 aaPredicted RBP22.61■■□□□ 1.21
KPNA1-210ENST00000494339 SRGAP2CP0DJJ0 459 aa22.61■■□□□ 1.21
KPNA1-210ENST00000494339 SMIM10L2AP0DMW4 78 aa22.61■■□□□ 1.21
KPNA1-210ENST00000494339 SMIM10L2BP0DMW5 78 aa22.61■■□□□ 1.21
KPNA1-210ENST00000494339 RPL13P26373 211 aaKnown RBP22.61■■□□□ 1.21
KPNA1-210ENST00000494339 PSEN2P49810 448 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms