RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 ACLYP53396 1101 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 TNFAIP2Q03169 654 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 TLE2Q04725 743 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 SNX17Q15036 470 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 USH1GQ495M9 461 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 EXOSC6Q5RKV6 272 aaKnown RBP9.41□□□□□ -0.9
RIF1-211ENST00000494333 IFIT1BQ5T764 474 aaKnown RBP9.41□□□□□ -0.9
RIF1-211ENST00000494333 CCSAPQ6IQ19 270 aaPredicted RBP9.41□□□□□ -0.9
RIF1-211ENST00000494333 RNF207Q6ZRF8 634 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 Q6ZS46 218 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 CYB5R4Q7L1T6 521 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 PDZD3Q86UT5 571 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 TDHQ8IZJ6 230 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 NUP133Q8WUM0 1156 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 CLEC4DQ8WXI8 215 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 TMPRSS13Q9BYE2 586 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 KATNBL1Q9H079 304 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 VAT1LQ9HCJ6 419 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 STARD7Q9NQZ5 370 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 PDGFCQ9NRA1 345 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 ADD3Q9UEY8 706 aaKnown RBP9.41□□□□□ -0.9
RIF1-211ENST00000494333 CEP290O15078 2479 aa9.4□□□□□ -0.9
RIF1-211ENST00000494333 ASTN1O14525 1302 aa9.4□□□□□ -0.9
RIF1-211ENST00000494333 WDR19Q8NEZ3 1342 aa9.4□□□□□ -0.9
RIF1-211ENST00000494333 DHX16O60231 1041 aaKnown RBP9.4□□□□□ -0.9
RIF1-211ENST00000494333 PROCP04070 461 aa9.4□□□□□ -0.9
RIF1-211ENST00000494333 ASGR1P07306 291 aa9.4□□□□□ -0.9
RIF1-211ENST00000494333 PARP1P09874 1014 aaKnown RBP9.4□□□□□ -0.9
RIF1-211ENST00000494333 GJA9P57773 515 aa9.4□□□□□ -0.9
RIF1-211ENST00000494333 RPS6P62753 249 aaKnown RBP9.4□□□□□ -0.9
RIF1-211ENST00000494333 CDC37Q16543 378 aaPredicted RBP9.4□□□□□ -0.9
RIF1-211ENST00000494333 ASPRV1Q53RT3 343 aa9.4□□□□□ -0.9
RIF1-211ENST00000494333 IQSEC1Q6DN90 963 aa9.4□□□□□ -0.9
RIF1-211ENST00000494333 ADGRF4Q8IZF3 695 aa9.4□□□□□ -0.9
RIF1-211ENST00000494333 PCSK9Q8NBP7 692 aaKnown RBP9.4□□□□□ -0.9
RIF1-211ENST00000494333 MAP4K1Q92918 833 aa9.4□□□□□ -0.9
RIF1-211ENST00000494333 MEGF10Q96KG7 1140 aa9.4□□□□□ -0.9
RIF1-211ENST00000494333 EMILIN2Q9BXX0 1053 aa9.4□□□□□ -0.9
RIF1-211ENST00000494333 CCDC86Q9H6F5 360 aaKnown RBP9.4□□□□□ -0.9
RIF1-211ENST00000494333 SAMM50Q9Y512 469 aa9.4□□□□□ -0.9
RIF1-211ENST00000494333 ZNFX1Q9P2E3 1918 aaKnown RBP9.4□□□□□ -0.9
RIF1-211ENST00000494333 ERICH2A1L162 156 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 TRIM43BA6NCK2 446 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 E7EWF7 191 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 IFIT3O14879 490 aaKnown RBP9.39□□□□□ -0.91
RIF1-211ENST00000494333 DYNC1LI2O43237 492 aaPredicted RBP9.39□□□□□ -0.91
RIF1-211ENST00000494333 PQBP1O60828 265 aaKnown RBP9.39□□□□□ -0.91
RIF1-211ENST00000494333 GLB1P16278 677 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 CST5P28325 142 aaPredicted RBP9.39□□□□□ -0.91
RIF1-211ENST00000494333 ALDH5A1P51649 535 aaPredicted RBP9.39□□□□□ -0.91
RIF1-211ENST00000494333 BEX3Q00994 111 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 ZNF252P-AS1Q0IIN9 211 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 SEC23AQ15436 765 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 TMEM63BQ5T3F8 832 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 RASIP1Q5U651 963 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 PCNX4Q63HM2 1172 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 TAPT1Q6NXT6 567 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 SLC30A10Q6XR72 485 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 CHST3Q7LGC8 479 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 RALYLQ86SE5 291 aaKnown RBP9.39□□□□□ -0.91
RIF1-211ENST00000494333 FBXO16Q8IX29 292 aaPredicted RBP9.39□□□□□ -0.91
RIF1-211ENST00000494333 NCOA7Q8NI08 942 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 MORC4Q8TE76 937 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 BADQ92934 168 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 TRIM43Q96BQ3 446 aaPredicted RBP9.39□□□□□ -0.91
RIF1-211ENST00000494333 GLT1D1Q96MS3 346 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 SPOCK3Q9BQ16 436 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 BACH2Q9BYV9 841 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 AP5M1Q9H0R1 490 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 UPF3AQ9H1J1 476 aaKnown RBP9.39□□□□□ -0.91
RIF1-211ENST00000494333 JMJD4Q9H9V9 463 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 CBX8Q9HC52 389 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 PDLIM7Q9NR12 457 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 TAF6LQ9Y6J9 622 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 SMCHD1A6NHR9 2005 aa9.39□□□□□ -0.91
RIF1-211ENST00000494333 ELP1O95163 1332 aa9.38□□□□□ -0.91
RIF1-211ENST00000494333 DCDC2CA8MYV0 355 aa9.38□□□□□ -0.91
RIF1-211ENST00000494333 KLRF2D3W0D1 207 aa9.38□□□□□ -0.91
RIF1-211ENST00000494333 MSTNO14793 375 aa9.38□□□□□ -0.91
RIF1-211ENST00000494333 CTAGE5O15320 804 aa9.38□□□□□ -0.91
RIF1-211ENST00000494333 CLTBP09497 229 aa9.38□□□□□ -0.91
RIF1-211ENST00000494333 RAG1P15918 1043 aa9.38□□□□□ -0.91
RIF1-211ENST00000494333 PTGS1P23219 599 aa9.38□□□□□ -0.91
RIF1-211ENST00000494333 QRICH1Q2TAL8 776 aa9.38□□□□□ -0.91
RIF1-211ENST00000494333 LRIT3Q3SXY7 679 aa9.38□□□□□ -0.91
RIF1-211ENST00000494333 HP1BP3Q5SSJ5 553 aaPredicted RBP9.38□□□□□ -0.91
RIF1-211ENST00000494333 CENPQQ7L2Z9 268 aaPredicted RBP9.38□□□□□ -0.91
RIF1-211ENST00000494333 TLK2Q86UE8 772 aa9.38□□□□□ -0.91
RIF1-211ENST00000494333 SKAP1Q86WV1 359 aa9.38□□□□□ -0.91
RIF1-211ENST00000494333 SMG8Q8ND04 991 aaKnown RBP9.38□□□□□ -0.91
RIF1-211ENST00000494333 TBC1D5Q92609 795 aa9.38□□□□□ -0.91
RIF1-211ENST00000494333 KCNB2Q92953 911 aa9.38□□□□□ -0.91
RIF1-211ENST00000494333 MRRFQ96E11 262 aaKnown RBP9.38□□□□□ -0.91
RIF1-211ENST00000494333 UBL7Q96S82 380 aaPredicted RBP9.38□□□□□ -0.91
RIF1-211ENST00000494333 MPHOSPH6Q99547 160 aaKnown RBP9.38□□□□□ -0.91
RIF1-211ENST00000494333 SSBP4Q9BWG4 385 aaPredicted RBP9.38□□□□□ -0.91
RIF1-211ENST00000494333 VTA1Q9NP79 307 aa9.38□□□□□ -0.91
RIF1-211ENST00000494333 KIAA1522Q9P206 1035 aaPredicted RBP9.38□□□□□ -0.91
RIF1-211ENST00000494333 Q9Y3F1 56 aa9.38□□□□□ -0.91
RIF1-211ENST00000494333 RBM8AQ9Y5S9 174 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms