RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 RNF169Q8NCN4 708 aa24.39■■□□□ 1.49
HPS3-207ENST00000494327 RAB34Q9BZG1 259 aa24.39■■□□□ 1.49
HPS3-207ENST00000494327 IFT122Q9HBG6 1241 aa24.39■■□□□ 1.49
HPS3-207ENST00000494327 TMEM161AQ9NX61 479 aa24.39■■□□□ 1.49
HPS3-207ENST00000494327 TBKBP1A7MCY6 615 aa24.38■■□□□ 1.49
HPS3-207ENST00000494327 K7ELQ4 463 aaPredicted RBP24.38■■□□□ 1.49
HPS3-207ENST00000494327 LAD1O00515 517 aa24.38■■□□□ 1.49
HPS3-207ENST00000494327 ASAP2O43150 1006 aa24.38■■□□□ 1.49
HPS3-207ENST00000494327 FGFR1P11362 822 aa24.38■■□□□ 1.49
HPS3-207ENST00000494327 BMPR1AP36894 532 aa24.38■■□□□ 1.49
HPS3-207ENST00000494327 PDIA5Q14554 519 aa24.38■■□□□ 1.49
HPS3-207ENST00000494327 DTHD1Q6ZMT9 781 aa24.38■■□□□ 1.49
HPS3-207ENST00000494327 PIN4Q9Y237 131 aaKnown RBP24.38■■□□□ 1.49
HPS3-207ENST00000494327 MRPL42Q9Y6G3 142 aaKnown RBP24.38■■□□□ 1.49
HPS3-207ENST00000494327 PDCP20941 246 aa24.37■■□□□ 1.49
HPS3-207ENST00000494327 IL17AQ16552 155 aa24.37■■□□□ 1.49
HPS3-207ENST00000494327 ECHDC2Q86YB7 292 aa24.37■■□□□ 1.49
HPS3-207ENST00000494327 SNX29Q8TEQ0 813 aa24.37■■□□□ 1.49
HPS3-207ENST00000494327 ELAC1Q9H777 363 aaKnown RBP24.37■■□□□ 1.49
HPS3-207ENST00000494327 DACT1Q9NYF0 836 aa24.37■■□□□ 1.49
HPS3-207ENST00000494327 DBR1Q9UK59 544 aaKnown RBP24.37■■□□□ 1.49
HPS3-207ENST00000494327 RWDD3Q9Y3V2 267 aa24.37■■□□□ 1.49
HPS3-207ENST00000494327 PP2D1A8MPX8 630 aa24.36■■□□□ 1.49
HPS3-207ENST00000494327 H3BNC9 293 aa24.36■■□□□ 1.49
HPS3-207ENST00000494327 LINC00271P0C7V0 271 aa24.36■■□□□ 1.49
HPS3-207ENST00000494327 PRPHP41219 470 aa24.36■■□□□ 1.49
HPS3-207ENST00000494327 MXD4Q14582 209 aaPredicted RBP24.36■■□□□ 1.49
HPS3-207ENST00000494327 ECM1Q16610 540 aa24.36■■□□□ 1.49
HPS3-207ENST00000494327 SPOUT1Q5T280 376 aaKnown RBP24.36■■□□□ 1.49
HPS3-207ENST00000494327 TWF2Q6IBS0 349 aaKnown RBP24.36■■□□□ 1.49
HPS3-207ENST00000494327 SRGAP1Q7Z6B7 1085 aa24.36■■□□□ 1.49
HPS3-207ENST00000494327 IGSF22Q8N9C0 903 aa24.36■■□□□ 1.49
HPS3-207ENST00000494327 ASAP3Q8TDY4 903 aa24.36■■□□□ 1.49
HPS3-207ENST00000494327 MINDY3Q9H8M7 445 aa24.36■■□□□ 1.49
HPS3-207ENST00000494327 CHST12Q9NRB3 414 aa24.36■■□□□ 1.49
HPS3-207ENST00000494327 LMCD1Q9NZU5 365 aa24.36■■□□□ 1.49
HPS3-207ENST00000494327 KIAA1024Q9UPX6 916 aa24.36■■□□□ 1.49
HPS3-207ENST00000494327 COL4A6Q14031 1691 aa24.35■■□□□ 1.49
HPS3-207ENST00000494327 ARHGEF35A5YM69 484 aa24.35■■□□□ 1.49
HPS3-207ENST00000494327 CDC25AP30304 524 aa24.35■■□□□ 1.49
HPS3-207ENST00000494327 PHKA2P46019 1235 aa24.35■■□□□ 1.49
HPS3-207ENST00000494327 ATP2C1P98194 919 aaPredicted RBP24.35■■□□□ 1.49
HPS3-207ENST00000494327 TFDP1Q14186 410 aa24.35■■□□□ 1.49
HPS3-207ENST00000494327 KRT79Q5XKE5 535 aa24.35■■□□□ 1.49
HPS3-207ENST00000494327 CLP1Q92989 425 aaKnown RBP24.35■■□□□ 1.49
HPS3-207ENST00000494327 POLR3FQ9H1D9 316 aaPredicted RBP24.35■■□□□ 1.49
HPS3-207ENST00000494327 GPRC5CQ9NQ84 441 aa24.35■■□□□ 1.49
HPS3-207ENST00000494327 STK24Q9Y6E0 443 aa24.35■■□□□ 1.49
HPS3-207ENST00000494327 A0A0U1RQF3 1178 aa24.34■■□□□ 1.49
HPS3-207ENST00000494327 RB1P06400 928 aa24.34■■□□□ 1.49
HPS3-207ENST00000494327 MUTP22033 750 aa24.34■■□□□ 1.49
HPS3-207ENST00000494327 ARL2P36404 184 aa24.34■■□□□ 1.49
HPS3-207ENST00000494327 PADI6Q6TGC4 694 aa24.34■■□□□ 1.49
HPS3-207ENST00000494327 INTS4Q96HW7 963 aaKnown RBP24.34■■□□□ 1.49
HPS3-207ENST00000494327 DDX19AQ9NUU7 478 aaKnown RBP24.34■■□□□ 1.49
HPS3-207ENST00000494327 COL4A4P53420 1690 aaPredicted RBP24.34■■□□□ 1.49
HPS3-207ENST00000494327 C5orf67F2Z3F1 127 aa24.33■■□□□ 1.49
HPS3-207ENST00000494327 SYT1P21579 422 aa24.33■■□□□ 1.49
HPS3-207ENST00000494327 CAPSQ13938 189 aa24.33■■□□□ 1.49
HPS3-207ENST00000494327 ZRSR1Q15695 479 aaKnown RBP24.33■■□□□ 1.49
HPS3-207ENST00000494327 PTPROQ16827 1216 aa24.33■■□□□ 1.49
HPS3-207ENST00000494327 LONRF3Q496Y0 759 aa24.33■■□□□ 1.49
HPS3-207ENST00000494327 BRAPQ7Z569 592 aa24.33■■□□□ 1.49
HPS3-207ENST00000494327 ABI1Q8IZP0 508 aa24.33■■□□□ 1.49
HPS3-207ENST00000494327 C11orf84Q9BUA3 381 aaPredicted RBP24.33■■□□□ 1.49
HPS3-207ENST00000494327 VWA3AA6NCI4 1184 aa24.32■■□□□ 1.48
HPS3-207ENST00000494327 INO80B-WBP1J3KQ70 363 aa24.32■■□□□ 1.48
HPS3-207ENST00000494327 HOXA2O43364 376 aa24.32■■□□□ 1.48
HPS3-207ENST00000494327 CSPG5O95196 566 aa24.32■■□□□ 1.48
HPS3-207ENST00000494327 GLRA2P23416 452 aa24.32■■□□□ 1.48
HPS3-207ENST00000494327 PTENP60484 403 aa24.32■■□□□ 1.48
HPS3-207ENST00000494327 MCPH1Q8NEM0 835 aa24.32■■□□□ 1.48
HPS3-207ENST00000494327 MRPL38Q96DV4 380 aaKnown RBP24.32■■□□□ 1.48
HPS3-207ENST00000494327 TMEM117Q9H0C3 514 aa24.32■■□□□ 1.48
HPS3-207ENST00000494327 BHMT2Q9H2M3 363 aa24.32■■□□□ 1.48
HPS3-207ENST00000494327 AGPAT5Q9NUQ2 364 aa24.32■■□□□ 1.48
HPS3-207ENST00000494327 RNF19AQ9NV58 838 aa24.32■■□□□ 1.48
HPS3-207ENST00000494327 TYW1Q9NV66 732 aaKnown RBP24.32■■□□□ 1.48
HPS3-207ENST00000494327 HCSTQ9UBK5 93 aa24.32■■□□□ 1.48
HPS3-207ENST00000494327 ARID2Q68CP9 1835 aa24.32■■□□□ 1.48
HPS3-207ENST00000494327 EYSQ5T1H1 3165 aa24.32■■□□□ 1.48
HPS3-207ENST00000494327 ERLIN2O94905 339 aa24.31■■□□□ 1.48
HPS3-207ENST00000494327 EOMESO95936 686 aa24.31■■□□□ 1.48
HPS3-207ENST00000494327 SNX21Q969T3 373 aa24.31■■□□□ 1.48
HPS3-207ENST00000494327 CASD1Q96PB1 797 aa24.31■■□□□ 1.48
HPS3-207ENST00000494327 PLVAPQ9BX97 442 aa24.31■■□□□ 1.48
HPS3-207ENST00000494327 ALG13Q9NP73 1137 aaKnown RBP24.31■■□□□ 1.48
HPS3-207ENST00000494327 LRRIQ4A6NIV6 560 aa24.3■■□□□ 1.48
HPS3-207ENST00000494327 E9PMD0 336 aa24.3■■□□□ 1.48
HPS3-207ENST00000494327 GRM6O15303 877 aa24.3■■□□□ 1.48
HPS3-207ENST00000494327 SKIP12755 728 aa24.3■■□□□ 1.48
HPS3-207ENST00000494327 CYP11B2P19099 503 aa24.3■■□□□ 1.48
HPS3-207ENST00000494327 ZNF598Q86UK7 904 aaKnown RBP24.3■■□□□ 1.48
HPS3-207ENST00000494327 HSCBQ8IWL3 235 aa24.3■■□□□ 1.48
HPS3-207ENST00000494327 HELQQ8TDG4 1101 aa24.3■■□□□ 1.48
HPS3-207ENST00000494327 LPPQ93052 612 aa24.3■■□□□ 1.48
HPS3-207ENST00000494327 MMTAG2Q9BU76 263 aaKnown RBP24.3■■□□□ 1.48
HPS3-207ENST00000494327 POLD4Q9HCU8 107 aa24.3■■□□□ 1.48
HPS3-207ENST00000494327 FAM105AQ9NUU6 356 aa24.3■■□□□ 1.48
HPS3-207ENST00000494327 THEGQ9P2T0 379 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms