RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 BMP2KQ9NSY1 1161 aaPredicted RBP10.93□□□□□ -0.66
UFD1-210ENST00000494054 RNF216Q9NWF9 866 aaPredicted RBP10.93□□□□□ -0.66
UFD1-210ENST00000494054 LIMCH1Q9UPQ0 1083 aa10.93□□□□□ -0.66
UFD1-210ENST00000494054 PCDHB12Q9Y5F1 795 aa10.93□□□□□ -0.66
UFD1-210ENST00000494054 A0A0U1RQF3 1178 aa10.92□□□□□ -0.66
UFD1-210ENST00000494054 DKC1O60832 514 aaKnown RBP eCLIP10.92□□□□□ -0.66
UFD1-210ENST00000494054 TBX10O75333 385 aa10.92□□□□□ -0.66
UFD1-210ENST00000494054 FGF18O76093 207 aa10.92□□□□□ -0.66
UFD1-210ENST00000494054 BAG4O95429 457 aaKnown RBP10.92□□□□□ -0.66
UFD1-210ENST00000494054 YWHABP31946 246 aaKnown RBP10.92□□□□□ -0.66
UFD1-210ENST00000494054 ERVFC1P60507 584 aa10.92□□□□□ -0.66
UFD1-210ENST00000494054 CDC42EP1Q00587 391 aa10.92□□□□□ -0.66
UFD1-210ENST00000494054 ADAM15Q13444 863 aa10.92□□□□□ -0.66
UFD1-210ENST00000494054 CLUL1Q15846 466 aa10.92□□□□□ -0.66
UFD1-210ENST00000494054 C8orf34Q49A92 452 aa10.92□□□□□ -0.66
UFD1-210ENST00000494054 RBM23Q86U06 439 aaKnown RBP10.92□□□□□ -0.66
UFD1-210ENST00000494054 ZNF410Q86VK4 478 aa10.92□□□□□ -0.66
UFD1-210ENST00000494054 TPH2Q8IWU9 490 aa10.92□□□□□ -0.66
UFD1-210ENST00000494054 PRPF31Q8WWY3 499 aaKnown RBP10.92□□□□□ -0.66
UFD1-210ENST00000494054 NLRP4Q96MN2 994 aa10.92□□□□□ -0.66
UFD1-210ENST00000494054 MTMR9Q96QG7 549 aa10.92□□□□□ -0.66
UFD1-210ENST00000494054 HSD17B14Q9BPX1 270 aa10.92□□□□□ -0.66
UFD1-210ENST00000494054 IFT122Q9HBG6 1241 aa10.92□□□□□ -0.66
UFD1-210ENST00000494054 AAASQ9NRG9 546 aa10.92□□□□□ -0.66
UFD1-210ENST00000494054 PCDHA12Q9UN75 941 aa10.92□□□□□ -0.66
UFD1-210ENST00000494054 PLXNA4Q9HCM2 1894 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 A0A087WWV3 80 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 NCK2O43639 380 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 ATP2B1P20020 1258 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 PBX3P40426 434 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 TXKP42681 527 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 NRIP1P48552 1158 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 POLGP54098 1239 aaPredicted RBP10.91□□□□□ -0.66
UFD1-210ENST00000494054 UBE3AQ05086 875 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 TRIM29Q14134 588 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 CALCRLQ16602 461 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 PUS10Q3MIT2 529 aaKnown RBP10.91□□□□□ -0.66
UFD1-210ENST00000494054 LONRF3Q496Y0 759 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 XKR9Q5GH70 373 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 KCNT2Q6UVM3 1135 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 THNSL1Q8IYQ7 743 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 GJD3Q8N144 294 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 HELQQ8TDG4 1101 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 SLC7A3Q8WY07 619 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 LPPQ93052 612 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 EIF2AK1Q9BQI3 630 aaKnown RBP10.91□□□□□ -0.66
UFD1-210ENST00000494054 JPH2Q9BR39 696 aaPredicted RBP10.91□□□□□ -0.66
UFD1-210ENST00000494054 TMEM60Q9H2L4 133 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 ZSWIM4Q9H7M6 989 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 TTC12Q9H892 705 aaPredicted RBP10.91□□□□□ -0.66
UFD1-210ENST00000494054 MINDY3Q9H8M7 445 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 XPNPEP1Q9NQW7 623 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 CHST12Q9NRB3 414 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 DACT1Q9NYF0 836 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 COL4A3BPQ9Y5P4 624 aa10.91□□□□□ -0.66
UFD1-210ENST00000494054 MEIS3P2A8K0S8 358 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 FSCN2O14926 492 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 PER2O15055 1255 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 HOXA2O43364 376 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 NEMFO60524 1076 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 LYPLA2O95372 231 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 EOMESO95936 686 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 SRGAP2CP0DJJ0 459 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 LAG3P18627 525 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 SFPQP23246 707 aaKnown RBP eCLIP10.9□□□□□ -0.66
UFD1-210ENST00000494054 RFC5P40937 340 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 PHKA2P46019 1235 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 RBM10P98175 930 aaKnown RBP10.9□□□□□ -0.66
UFD1-210ENST00000494054 PLCB3Q01970 1234 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 LAMTOR4Q0VGL1 99 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 EMC2Q15006 297 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 TWF2Q6IBS0 349 aaKnown RBP10.9□□□□□ -0.66
UFD1-210ENST00000494054 OTUD6AQ7L8S5 288 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 CATSPER4Q7RTX7 472 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 ABI1Q8IZP0 508 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 LRRC43Q8N309 656 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 EFHBQ8N7U6 833 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 MICAL1Q8TDZ2 1067 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 TRAIPQ9BWF2 469 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 INO80BQ9C086 356 aaPredicted RBP10.9□□□□□ -0.66
UFD1-210ENST00000494054 TLR9Q9NR96 1032 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 CLEC1BQ9P126 229 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 PIN4Q9Y237 131 aaKnown RBP10.9□□□□□ -0.66
UFD1-210ENST00000494054 PPME1Q9Y570 386 aa10.9□□□□□ -0.66
UFD1-210ENST00000494054 MBTPS2O43462 519 aa10.89□□□□□ -0.67
UFD1-210ENST00000494054 GLP2RO95838 553 aa10.89□□□□□ -0.67
UFD1-210ENST00000494054 SPATA31C1P0DKV0 1188 aa10.89□□□□□ -0.67
UFD1-210ENST00000494054 HOXA11P31270 313 aaPredicted RBP10.89□□□□□ -0.67
UFD1-210ENST00000494054 MCM7P33993 719 aa10.89□□□□□ -0.67
UFD1-210ENST00000494054 NDUFV1P49821 464 aa10.89□□□□□ -0.67
UFD1-210ENST00000494054 SMAD2Q15796 467 aaKnown RBP10.89□□□□□ -0.67
UFD1-210ENST00000494054 CSPP1Q1MSJ5 1256 aa10.89□□□□□ -0.67
UFD1-210ENST00000494054 FERMT3Q86UX7 667 aa10.89□□□□□ -0.67
UFD1-210ENST00000494054 VN1R2Q8NFZ6 395 aa10.89□□□□□ -0.67
UFD1-210ENST00000494054 PIGOQ8TEQ8 1089 aa10.89□□□□□ -0.67
UFD1-210ENST00000494054 PSPC1Q8WXF1 523 aaKnown RBP10.89□□□□□ -0.67
UFD1-210ENST00000494054 MRPS27Q92552 414 aaKnown RBP10.89□□□□□ -0.67
UFD1-210ENST00000494054 PPP2R3CQ969Q6 453 aa10.89□□□□□ -0.67
UFD1-210ENST00000494054 C8orf76Q96K31 380 aa10.89□□□□□ -0.67
UFD1-210ENST00000494054 MSLNLQ96KJ4 702 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms