RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 GPC3P51654 580 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 CRYBB1P53674 252 aaPredicted RBP8.4□□□□□ -1.06
VEGFA-214ENST00000493786 CCL23P55773 120 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 CACNB1Q02641 598 aaPredicted RBP8.4□□□□□ -1.06
VEGFA-214ENST00000493786 NCBP1Q09161 790 aaKnown RBP8.4□□□□□ -1.06
VEGFA-214ENST00000493786 DRP2Q13474 957 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 CAPSQ13938 189 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 GIT2Q14161 759 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 POSTNQ15063 836 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 TMEM132AQ24JP5 1023 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 ARSHQ5FYA8 562 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 HERC4Q5GLZ8 1057 aaPredicted RBP8.4□□□□□ -1.06
VEGFA-214ENST00000493786 STXBP4Q6ZWJ1 553 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 SH3RF1Q7Z6J0 888 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 GRAMD1CQ8IYS0 662 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 USP38Q8NB14 1042 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 SLC17A8Q8NDX2 589 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 ENGASEQ8NFI3 743 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 ASAP3Q8TDY4 903 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 LRRC15Q8TF66 581 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 STAMQ92783 540 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 WNT8BQ93098 351 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 TRIM43Q96BQ3 446 aaPredicted RBP8.4□□□□□ -1.06
VEGFA-214ENST00000493786 OSMRQ99650 979 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 C7orf25Q9BPX7 421 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 TRIM9Q9C026 710 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 KMT5AQ9NQR1 393 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 EXOC1Q9NV70 894 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 PANK4Q9NVE7 773 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 SEL1LQ9UBV2 794 aa8.4□□□□□ -1.06
VEGFA-214ENST00000493786 ZMYND8Q9ULU4 1186 aaPredicted RBP8.4□□□□□ -1.06
VEGFA-214ENST00000493786 MKI67P46013 3256 aaKnown RBP8.4□□□□□ -1.07
VEGFA-214ENST00000493786 WDR81Q562E7 1941 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 A0A087WZ62 844 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 PVALEFA0A1B0GWK0 134 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 SFI1A8K8P3 1242 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 INO80B-WBP1J3KQ70 363 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 K7ENM7 598 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 GPR182O15218 404 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 GPR32O75388 356 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 ERLIN2O94905 339 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 CHRNA1P02708 482 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 PFKMP08237 780 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 IQCF3P0C7M6 154 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 GHRP10912 638 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 SYN1P17600 705 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 SCP2P22307 547 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 GLRA2P23416 452 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 RGS19P49795 217 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 EFNA5P52803 228 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 PEX3P56589 373 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 MLLT1Q03111 559 aaPredicted RBP8.39□□□□□ -1.07
VEGFA-214ENST00000493786 FPGSQ05932 587 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 POU5F1BQ06416 359 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 STRN3Q13033 797 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 PAK2Q13177 524 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 PPIGQ13427 754 aaKnown RBP eCLIP8.39□□□□□ -1.072e-7■■□□□ 13.3
VEGFA-214ENST00000493786 MKRN4PQ13434 485 aaPredicted RBP8.39□□□□□ -1.07
VEGFA-214ENST00000493786 SNW1Q13573 536 aaKnown RBP8.39□□□□□ -1.07
VEGFA-214ENST00000493786 FAM26DQ5JW98 314 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 MFSD5Q6N075 450 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 CNNM4Q6P4Q7 775 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 TSHZ1Q6ZSZ6 1077 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 SRGAP1Q7Z6B7 1085 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 FAM178BQ8IXR5 827 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 RPUSD2Q8IZ73 545 aaKnown RBP8.39□□□□□ -1.07
VEGFA-214ENST00000493786 SYAP1Q96A49 352 aaPredicted RBP8.39□□□□□ -1.07
VEGFA-214ENST00000493786 SCLYQ96I15 445 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 ZNF668Q96K58 619 aaPredicted RBP8.39□□□□□ -1.07
VEGFA-214ENST00000493786 FDXACB1Q9BRP7 624 aaPredicted RBP8.39□□□□□ -1.07
VEGFA-214ENST00000493786 BLZF1Q9H2G9 400 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 ADAMTS10Q9H324 1103 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 MRPL44Q9H9J2 332 aaKnown RBP8.39□□□□□ -1.07
VEGFA-214ENST00000493786 POLD4Q9HCU8 107 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 RNF216Q9NWF9 866 aaPredicted RBP8.39□□□□□ -1.07
VEGFA-214ENST00000493786 RMND1Q9NWS8 449 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 SQORQ9Y6N5 450 aa8.39□□□□□ -1.07
VEGFA-214ENST00000493786 ARID2Q68CP9 1835 aa8.38□□□□□ -1.07
VEGFA-214ENST00000493786 UMODL1Q5DID0 1318 aa8.38□□□□□ -1.07
VEGFA-214ENST00000493786 SLC16A4O15374 487 aa8.38□□□□□ -1.07
VEGFA-214ENST00000493786 TRAK2O60296 914 aa8.38□□□□□ -1.07
VEGFA-214ENST00000493786 RPS6KA5O75582 802 aa8.38□□□□□ -1.07
VEGFA-214ENST00000493786 RPN1P04843 607 aaKnown RBP8.38□□□□□ -1.07
VEGFA-214ENST00000493786 ACTN1P12814 892 aa8.38□□□□□ -1.07
VEGFA-214ENST00000493786 DARSP14868 501 aaKnown RBP8.38□□□□□ -1.07
VEGFA-214ENST00000493786 EIF4BP23588 611 aaKnown RBP8.38□□□□□ -1.07
VEGFA-214ENST00000493786 NPTX2P47972 431 aa8.38□□□□□ -1.07
VEGFA-214ENST00000493786 ZNF131P52739 623 aa8.38□□□□□ -1.07
VEGFA-214ENST00000493786 PTENP60484 403 aa8.38□□□□□ -1.07
VEGFA-214ENST00000493786 MGAT3Q09327 533 aa8.38□□□□□ -1.07
VEGFA-214ENST00000493786 NFX1Q12986 1120 aaKnown RBP8.38□□□□□ -1.07
VEGFA-214ENST00000493786 COASYQ13057 564 aa8.38□□□□□ -1.07
VEGFA-214ENST00000493786 MAPK7Q13164 816 aa8.38□□□□□ -1.07
VEGFA-214ENST00000493786 CUL4BQ13620 913 aa8.38□□□□□ -1.07
VEGFA-214ENST00000493786 ALCAMQ13740 583 aa8.38□□□□□ -1.07
VEGFA-214ENST00000493786 PCBP1Q15365 356 aaKnown RBP eCLIP8.38□□□□□ -1.071e-7■□□□□ 10.7
VEGFA-214ENST00000493786 MAPK6Q16659 721 aa8.38□□□□□ -1.07
VEGFA-214ENST00000493786 FBXO47Q5MNV8 452 aa8.38□□□□□ -1.07
VEGFA-214ENST00000493786 FAM43BQ6ZT52 329 aaPredicted RBP8.38□□□□□ -1.07
VEGFA-214ENST00000493786 UNC13DQ70J99 1090 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms