RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 POTEAQ6S8J7 498 aa20.54■□□□□ 0.88
TSC22D4-205ENST00000493217 U2AF1L4Q8WU68 220 aaKnown RBP20.54■□□□□ 0.88
TSC22D4-205ENST00000493217 PBKQ96KB5 322 aa20.54■□□□□ 0.88
TSC22D4-205ENST00000493217 FAM204AQ9H8W3 233 aa20.54■□□□□ 0.88
TSC22D4-205ENST00000493217 NPEPPSP55786 919 aa20.53■□□□□ 0.88
TSC22D4-205ENST00000493217 PHLDB3Q6NSJ2 640 aa20.53■□□□□ 0.88
TSC22D4-205ENST00000493217 INTS8Q75QN2 995 aaKnown RBP20.53■□□□□ 0.88
TSC22D4-205ENST00000493217 FMNL3Q8IVF7 1028 aa20.53■□□□□ 0.88
TSC22D4-205ENST00000493217 GLYCTKQ8IVS8 523 aa20.53■□□□□ 0.88
TSC22D4-205ENST00000493217 C12orf56Q8IXR9 622 aa20.53■□□□□ 0.88
TSC22D4-205ENST00000493217 IFT20Q8IY31 132 aa20.53■□□□□ 0.88
TSC22D4-205ENST00000493217 C4orf19Q8IY42 314 aa20.53■□□□□ 0.88
TSC22D4-205ENST00000493217 CAVIN3Q969G5 261 aa20.53■□□□□ 0.88
TSC22D4-205ENST00000493217 ASTN2O75129 1339 aaPredicted RBP20.52■□□□□ 0.88
TSC22D4-205ENST00000493217 GOLGA6BA6NDN3 693 aa20.52■□□□□ 0.88
TSC22D4-205ENST00000493217 TISP43B9A030 160 aa20.52■□□□□ 0.88
TSC22D4-205ENST00000493217 LMNB1P20700 586 aa20.52■□□□□ 0.88
TSC22D4-205ENST00000493217 GALCP54803 685 aa20.52■□□□□ 0.88
TSC22D4-205ENST00000493217 RNASE9P60153 205 aaKnown RBP20.52■□□□□ 0.88
TSC22D4-205ENST00000493217 MTMR2Q13614 643 aa20.52■□□□□ 0.88
TSC22D4-205ENST00000493217 LMBR1Q8WVP7 490 aa20.52■□□□□ 0.88
TSC22D4-205ENST00000493217 ACCSQ96QU6 501 aa20.52■□□□□ 0.88
TSC22D4-205ENST00000493217 TAOK3Q9H2K8 898 aa20.52■□□□□ 0.88
TSC22D4-205ENST00000493217 ST6GALNAC4Q9H4F1 302 aa20.52■□□□□ 0.88
TSC22D4-205ENST00000493217 STXBP5LQ9Y2K9 1186 aa20.52■□□□□ 0.88
TSC22D4-205ENST00000493217 ATP9AO75110 1047 aa20.52■□□□□ 0.87
TSC22D4-205ENST00000493217 HEXIM1O94992 359 aaKnown RBP20.52■□□□□ 0.87
TSC22D4-205ENST00000493217 RFX1P22670 979 aa20.52■□□□□ 0.87
TSC22D4-205ENST00000493217 DLG4P78352 724 aa20.52■□□□□ 0.87
TSC22D4-205ENST00000493217 GTF2BQ00403 316 aa20.52■□□□□ 0.87
TSC22D4-205ENST00000493217 ACTRT1Q8TDG2 376 aa20.52■□□□□ 0.87
TSC22D4-205ENST00000493217 PKNOX2Q96KN3 472 aa20.52■□□□□ 0.87
TSC22D4-205ENST00000493217 KRT12Q99456 494 aa20.52■□□□□ 0.87
TSC22D4-205ENST00000493217 PDCD2LQ9BRP1 358 aa20.52■□□□□ 0.87
TSC22D4-205ENST00000493217 PCIF1Q9H4Z3 704 aa20.52■□□□□ 0.87
TSC22D4-205ENST00000493217 CCDC172P0C7W6 258 aa20.51■□□□□ 0.87
TSC22D4-205ENST00000493217 KRT13P13646 458 aa20.51■□□□□ 0.87
TSC22D4-205ENST00000493217 HNRNPH2P55795 449 aaKnown RBP20.51■□□□□ 0.87
TSC22D4-205ENST00000493217 TGFB2P61812 414 aa20.51■□□□□ 0.87
TSC22D4-205ENST00000493217 UGCGQ16739 394 aa20.51■□□□□ 0.87
TSC22D4-205ENST00000493217 TRERF1Q96PN7 1200 aa20.51■□□□□ 0.87
TSC22D4-205ENST00000493217 RMDN3Q96TC7 470 aa20.51■□□□□ 0.87
TSC22D4-205ENST00000493217 SH2D3AQ9BRG2 576 aa20.51■□□□□ 0.87
TSC22D4-205ENST00000493217 CBWD1Q9BRT8 395 aa20.51■□□□□ 0.87
TSC22D4-205ENST00000493217 TIPINQ9BVW5 301 aa20.51■□□□□ 0.87
TSC22D4-205ENST00000493217 RPAP3Q9H6T3 665 aaPredicted RBP20.51■□□□□ 0.87
TSC22D4-205ENST00000493217 PXMP2Q9NR77 195 aa20.51■□□□□ 0.87
TSC22D4-205ENST00000493217 CARSP49589 748 aaKnown RBP20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 HAUS6Q7Z4H7 955 aa20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 SCFD2Q8WU76 684 aa20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 EPB41L5Q9HCM4 733 aa20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 SUCLA2Q9P2R7 463 aaPredicted RBP20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 PNMA2Q9UL42 364 aa20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 EMSYQ7Z589 1322 aa20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 TMEM150BA6NC51 233 aa20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 ZSCAN5CA6NGD5 496 aaPredicted RBP20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 P4HA2O15460 535 aa20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 MYCLP12524 364 aaPredicted RBP20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 VAMP7P51809 220 aa20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 GUCY2DQ02846 1103 aa20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 NNTQ13423 1086 aa20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 TAF3Q5VWG9 929 aa20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 RNF207Q6ZRF8 634 aa20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 PEX26Q7Z412 305 aa20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 DEFB132Q7Z7B7 95 aa20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 NT5DC3Q86UY8 548 aa20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 SYCE1Q8N0S2 351 aa20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 METTL13Q8N6R0 699 aa20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 CALCOCO1Q9P1Z2 691 aa20.5■□□□□ 0.87
TSC22D4-205ENST00000493217 FOXN3O00409 490 aaPredicted RBP20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 VWA5AO00534 786 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 BACH1O14867 736 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 ZBED4O75132 1171 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 CCNE2O96020 404 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 TMEM253P0C7T8 217 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 RPS12P25398 132 aaKnown RBP20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 JAK3P52333 1124 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 PSMC5P62195 406 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 TNNC1P63316 161 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 PPP3CAQ08209 521 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 KIF22Q14807 665 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 ARHGAP44Q17R89 818 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 C1orf220Q5T0J3 134 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 XXYLT1Q8NBI6 393 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 TSEN2Q8NCE0 465 aaKnown RBP20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 HSPBP1Q9NZL4 362 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 WDR64B1ANS9 1081 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 MAPK13O15264 365 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 FDX1P10109 184 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 CAPN2P17655 700 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 SFNP31947 248 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 ACTN2P35609 894 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 NCKAP1LP55160 1127 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 SNRPFP62306 86 aaKnown RBP20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 DALRD3Q5D0E6 543 aaKnown RBP20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 DAAM2Q86T65 1068 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 RFFLQ8WZ73 363 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 HES6Q96HZ4 224 aa20.49■□□□□ 0.87
TSC22D4-205ENST00000493217 CALR3Q96L12 384 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms