RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 DGAT1O75907 488 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 ATF7P17544 494 aaPredicted RBP8□□□□□ -1.13
PDLIM1-204ENST00000492511 POU3F3P20264 500 aaPredicted RBP8□□□□□ -1.13
PDLIM1-204ENST00000492511 HOXA11P31270 313 aaPredicted RBP8□□□□□ -1.13
PDLIM1-204ENST00000492511 PTENP60484 403 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 GRB10Q13322 594 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 CAPSQ13938 189 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 PTPAQ15257 358 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 SF3A1Q15459 793 aaKnown RBP8□□□□□ -1.13
PDLIM1-204ENST00000492511 ODR4Q5SWX8 454 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 HYIQ5T013 277 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 ARL6IP4Q66PJ3 421 aaKnown RBP8□□□□□ -1.13
PDLIM1-204ENST00000492511 PADI6Q6TGC4 694 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 FAM43BQ6ZT52 329 aaPredicted RBP8□□□□□ -1.13
PDLIM1-204ENST00000492511 MAEAQ7L5Y9 396 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 ZNF598Q86UK7 904 aaKnown RBP8□□□□□ -1.13
PDLIM1-204ENST00000492511 ECHDC2Q86YB7 292 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 RNF149Q8NC42 400 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 ERMNQ8TAM6 284 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 SNX29Q8TEQ0 813 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 LRRC15Q8TF66 581 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 TCP11Q8WWU5 503 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 PSPC1Q8WXF1 523 aaKnown RBP8□□□□□ -1.13
PDLIM1-204ENST00000492511 BSNDQ8WZ55 320 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 CLP1Q92989 425 aaKnown RBP8□□□□□ -1.13
PDLIM1-204ENST00000492511 NLRP4Q96MN2 994 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 TGS1Q96RS0 853 aaKnown RBP8□□□□□ -1.13
PDLIM1-204ENST00000492511 ATP6V0A4Q9HBG4 840 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 C1orf112Q9NSG2 853 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 DDX19AQ9NUU7 478 aaKnown RBP8□□□□□ -1.13
PDLIM1-204ENST00000492511 MTUS1Q9ULD2 1270 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 KIAA1024Q9UPX6 916 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 MTCH2Q9Y6C9 303 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 ADGRA3Q8IWK6 1321 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 A0A0U1RQF3 1178 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 DENND3A2RUS2 1198 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 FGFR1P11362 822 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 CYP11B2P19099 503 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 COL9A1P20849 921 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 IBSPP21815 317 aaPredicted RBP7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 IGFBP4P22692 258 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 POU5F1BQ06416 359 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 MXD4Q14582 209 aaPredicted RBP7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 AMHR2Q16671 573 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 EPC2Q52LR7 807 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 UBXN11Q5T124 520 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 KRT79Q5XKE5 535 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 HAUS3Q68CZ6 603 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 LRRC55Q6ZSA7 311 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 MICAL3Q7RTP6 2002 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 SRGAP1Q7Z6B7 1085 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 IFNLR1Q8IU57 520 aaPredicted RBP7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 HSCBQ8IWL3 235 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 TMEM192Q8IY95 271 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 SPRYD3Q8NCJ5 442 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 GDPD5Q8WTR4 605 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 GBF1Q92538 1859 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 KAT6AQ92794 2004 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 SCLT1Q96NL6 688 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 CASD1Q96PB1 797 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 TRAIPQ9BWF2 469 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 INO80BQ9C086 356 aaPredicted RBP7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 POLR3FQ9H1D9 316 aaPredicted RBP7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 BHMT2Q9H2M3 363 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 ELAC1Q9H777 363 aaKnown RBP7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 CHST12Q9NRB3 414 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 TMEM161AQ9NX61 479 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 HCSTQ9UBK5 93 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 PCDHB7Q9Y5E2 793 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 MRPL42Q9Y6G3 142 aaKnown RBP7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 WDR81Q562E7 1941 aa7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 MYH9P35579 1960 aaKnown RBP7.99□□□□□ -1.13
PDLIM1-204ENST00000492511 MYO9BQ13459 2157 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 NCOR1O75376 2440 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 ARHGEF35A5YM69 484 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 TTLL13PA6NNM8 815 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 MEIS3P2A8K0S8 358 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 C5orf67F2Z3F1 127 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 H3BNC9 293 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 TSPAN1O60635 241 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 EYA4O95677 639 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 EDN1P05305 212 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 STAG3L1P0CL83 205 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 ZSCAN20P17040 1043 aaPredicted RBP7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 SFPQP23246 707 aaKnown RBP eCLIP7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 MARCKSP29966 332 aaPredicted RBP7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 BMPR1AP36894 532 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 PHKA2P46019 1235 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 MBTD1Q05BQ5 628 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 PKP1Q13835 747 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 BTG3Q14201 252 aaPredicted RBP7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 CCDC85BQ15834 202 aaPredicted RBP7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 TMEM119Q4V9L6 283 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 PAN2Q504Q3 1202 aaKnown RBP7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 CLLU1OSQ5K130 101 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 RINT1Q6NUQ1 792 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 C1orf186Q6ZWK4 172 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 USP49Q70CQ1 688 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 CATSPER4Q7RTX7 472 aa7.98□□□□□ -1.13
PDLIM1-204ENST00000492511 CMTR2Q8IYT2 770 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms