RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 PCDHA12Q9UN75 941 aa16.42■□□□□ 0.22
SS18L1-205ENST00000492466 FAM50BQ9Y247 325 aa16.42■□□□□ 0.22
SS18L1-205ENST00000492466 MUC6Q6W4X9 2439 aa16.42■□□□□ 0.22
SS18L1-205ENST00000492466 DENND3A2RUS2 1198 aa16.41■□□□□ 0.22
SS18L1-205ENST00000492466 GLP2RO95838 553 aa16.41■□□□□ 0.22
SS18L1-205ENST00000492466 OR52Z1P0C646 297 aa16.41■□□□□ 0.22
SS18L1-205ENST00000492466 ALADP13716 330 aa16.41■□□□□ 0.22
SS18L1-205ENST00000492466 TRAPPC10P48553 1259 aa16.41■□□□□ 0.22
SS18L1-205ENST00000492466 PSMC5P62195 406 aa16.41■□□□□ 0.22
SS18L1-205ENST00000492466 ORC2Q13416 577 aaPredicted RBP16.41■□□□□ 0.22
SS18L1-205ENST00000492466 CUL4AQ13619 759 aa16.41■□□□□ 0.22
SS18L1-205ENST00000492466 MTERF2Q49AM1 385 aa16.41■□□□□ 0.22
SS18L1-205ENST00000492466 B3GNT9Q6UX72 402 aa16.41■□□□□ 0.22
SS18L1-205ENST00000492466 EFHBQ8N7U6 833 aa16.41■□□□□ 0.22
SS18L1-205ENST00000492466 HAS1Q92839 578 aa16.41■□□□□ 0.22
SS18L1-205ENST00000492466 SCLT1Q96NL6 688 aa16.41■□□□□ 0.22
SS18L1-205ENST00000492466 MAP7D2Q96T17 732 aa16.41■□□□□ 0.22
SS18L1-205ENST00000492466 TTC12Q9H892 705 aaPredicted RBP16.41■□□□□ 0.22
SS18L1-205ENST00000492466 TYW1Q9NV66 732 aaKnown RBP16.41■□□□□ 0.22
SS18L1-205ENST00000492466 TBKBP1A7MCY6 615 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 DDX11L8A8MPP1 907 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 WNT7AO00755 349 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 MAGEB2O15479 319 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 DCXO43602 365 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 STBD1O95210 358 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 FGFR1P11362 822 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 IBSPP21815 317 aaPredicted RBP16.4■□□□□ 0.22
SS18L1-205ENST00000492466 U2AF2P26368 475 aaKnown RBP eCLIP16.4■□□□□ 0.221e-13■■■□□ 14.8
SS18L1-205ENST00000492466 NLRP11P59045 1033 aaKnown RBP16.4■□□□□ 0.22
SS18L1-205ENST00000492466 CYP4A11Q02928 519 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 TBC1D8BQ0IIM8 1120 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 SMAD4Q13485 552 aaKnown RBP16.4■□□□□ 0.22
SS18L1-205ENST00000492466 NBR1Q14596 966 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 TARBP2Q15633 366 aaKnown RBP16.4■□□□□ 0.22
SS18L1-205ENST00000492466 XKR3Q5GH77 459 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 ODR4Q5SWX8 454 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 EFCAB12Q6NXP0 572 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 LRRC55Q6ZSA7 311 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 LRRC71Q8N4P6 559 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 CEP89Q96ST8 783 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 LXNQ9BS40 222 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 ELAC1Q9H777 363 aaKnown RBP16.4■□□□□ 0.22
SS18L1-205ENST00000492466 TMEM161AQ9NX61 479 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 CD207Q9UJ71 328 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 HCN4Q9Y3Q4 1203 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 MYH15Q9Y2K3 1946 aa16.4■□□□□ 0.22
SS18L1-205ENST00000492466 EML1O00423 815 aa16.39■□□□□ 0.21
SS18L1-205ENST00000492466 EIF4BP23588 611 aaKnown RBP16.39■□□□□ 0.21
SS18L1-205ENST00000492466 TMOD1P28289 359 aa16.39■□□□□ 0.21
SS18L1-205ENST00000492466 QARSP47897 775 aaKnown RBP16.39■□□□□ 0.21
SS18L1-205ENST00000492466 NRIP1P48552 1158 aa16.39■□□□□ 0.21
SS18L1-205ENST00000492466 ERVFC1P60507 584 aa16.39■□□□□ 0.21
SS18L1-205ENST00000492466 UBE3AQ05086 875 aa16.39■□□□□ 0.21
SS18L1-205ENST00000492466 COASYQ13057 564 aa16.39■□□□□ 0.21
SS18L1-205ENST00000492466 EPHA7Q15375 998 aa16.39■□□□□ 0.21
SS18L1-205ENST00000492466 SMRP1Q8NCR6 262 aa16.39■□□□□ 0.21
SS18L1-205ENST00000492466 ERMNQ8TAM6 284 aa16.39■□□□□ 0.21
SS18L1-205ENST00000492466 AKT3Q9Y243 479 aa16.39■□□□□ 0.21
SS18L1-205ENST00000492466 PCDHB12Q9Y5F1 795 aa16.39■□□□□ 0.21
SS18L1-205ENST00000492466 PIEZO1Q92508 2521 aa16.38■□□□□ 0.21
SS18L1-205ENST00000492466 POTEMA6NI47 508 aa16.38■□□□□ 0.21
SS18L1-205ENST00000492466 FSCN2O14926 492 aa16.38■□□□□ 0.21
SS18L1-205ENST00000492466 FGF18O76093 207 aa16.38■□□□□ 0.21
SS18L1-205ENST00000492466 P4HBP07237 508 aaKnown RBP16.38■□□□□ 0.21
SS18L1-205ENST00000492466 HOXD11P31277 338 aaPredicted RBP16.38■□□□□ 0.21
SS18L1-205ENST00000492466 GPC3P51654 580 aa16.38■□□□□ 0.21
SS18L1-205ENST00000492466 RBM10P98175 930 aaKnown RBP16.38■□□□□ 0.21
SS18L1-205ENST00000492466 DRP2Q13474 957 aa16.38■□□□□ 0.21
SS18L1-205ENST00000492466 KCNC3Q14003 757 aa16.38■□□□□ 0.21
SS18L1-205ENST00000492466 RILPL1Q5EBL4 403 aa16.38■□□□□ 0.21
SS18L1-205ENST00000492466 RBM23Q86U06 439 aaKnown RBP16.38■□□□□ 0.21
SS18L1-205ENST00000492466 TPH2Q8IWU9 490 aa16.38■□□□□ 0.21
SS18L1-205ENST00000492466 COLGALT1Q8NBJ5 622 aa16.38■□□□□ 0.21
SS18L1-205ENST00000492466 VN1R2Q8NFZ6 395 aa16.38■□□□□ 0.21
SS18L1-205ENST00000492466 INTS4Q96HW7 963 aaKnown RBP16.38■□□□□ 0.21
SS18L1-205ENST00000492466 DYDC2Q96IM9 177 aa16.38■□□□□ 0.21
SS18L1-205ENST00000492466 CASD1Q96PB1 797 aa16.38■□□□□ 0.21
SS18L1-205ENST00000492466 RAB34Q9BZG1 259 aa16.38■□□□□ 0.21
SS18L1-205ENST00000492466 TMEM60Q9H2L4 133 aa16.38■□□□□ 0.21
SS18L1-205ENST00000492466 ATP6V0A4Q9HBG4 840 aa16.38■□□□□ 0.21
SS18L1-205ENST00000492466 USP34Q70CQ2 3546 aa16.37■□□□□ 0.21
SS18L1-205ENST00000492466 PER2O15055 1255 aa16.37■□□□□ 0.21
SS18L1-205ENST00000492466 NDUFV1P49821 464 aa16.37■□□□□ 0.21
SS18L1-205ENST00000492466 CTTNQ14247 550 aaKnown RBP16.37■□□□□ 0.21
SS18L1-205ENST00000492466 HERC4Q5GLZ8 1057 aaPredicted RBP16.37■□□□□ 0.21
SS18L1-205ENST00000492466 PLA2G4FQ68DD2 849 aa16.37■□□□□ 0.21
SS18L1-205ENST00000492466 FERMT3Q86UX7 667 aa16.37■□□□□ 0.21
SS18L1-205ENST00000492466 PPP2R3CQ969Q6 453 aa16.37■□□□□ 0.21
SS18L1-205ENST00000492466 SNX21Q969T3 373 aa16.37■□□□□ 0.21
SS18L1-205ENST00000492466 ZNF668Q96K58 619 aaPredicted RBP16.37■□□□□ 0.21
SS18L1-205ENST00000492466 EIF2AK1Q9BQI3 630 aaKnown RBP16.37■□□□□ 0.21
SS18L1-205ENST00000492466 NIFKQ9BYG3 293 aaKnown RBP16.37■□□□□ 0.21
SS18L1-205ENST00000492466 TMEM117Q9H0C3 514 aa16.37■□□□□ 0.21
SS18L1-205ENST00000492466 TLR9Q9NR96 1032 aa16.37■□□□□ 0.21
SS18L1-205ENST00000492466 RNF216Q9NWF9 866 aaPredicted RBP16.37■□□□□ 0.21
SS18L1-205ENST00000492466 RGL1Q9NZL6 768 aa16.37■□□□□ 0.21
SS18L1-205ENST00000492466 BARX2Q9UMQ3 279 aaPredicted RBP16.37■□□□□ 0.21
SS18L1-205ENST00000492466 TECTAO75443 2155 aa16.37■□□□□ 0.21
SS18L1-205ENST00000492466 IGKV6-21A0A0C4DH24 114 aa16.36■□□□□ 0.21
SS18L1-205ENST00000492466 TMEM150BA6NC51 233 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms