RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 HSPBP1Q9NZL4 362 aa5.62□□□□□ -1.51
RTN4-215ENST00000491592 APOBEC2Q9Y235 224 aaKnown RBP5.62□□□□□ -1.51
RTN4-215ENST00000491592 NCANO14594 1321 aa5.62□□□□□ -1.51
RTN4-215ENST00000491592 PTPRKQ15262 1439 aa5.62□□□□□ -1.51
RTN4-215ENST00000491592 EHBP1L1Q8N3D4 1523 aa5.62□□□□□ -1.51
RTN4-215ENST00000491592 CC2D2AQ9P2K1 1620 aa5.62□□□□□ -1.51
RTN4-215ENST00000491592 TCAF2A6NFQ2 919 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 B8ZZF3 427 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 PRRT4C9JH25 899 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 DVL2O14641 736 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 BRD4O60885 1362 aaPredicted RBP5.61□□□□□ -1.51
RTN4-215ENST00000491592 KRT1P04264 644 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 AOAHP28039 575 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 SDHAP31040 664 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 KPNA1P52294 538 aaPredicted RBP5.61□□□□□ -1.51
RTN4-215ENST00000491592 RRP1P56182 461 aaKnown RBP5.61□□□□□ -1.51
RTN4-215ENST00000491592 NFKB2Q00653 900 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 OCRLQ01968 901 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 SIM2Q14190 667 aaPredicted RBP5.61□□□□□ -1.51
RTN4-215ENST00000491592 CUL7Q14999 1698 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 TMEM132BQ14DG7 1078 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 KIF7Q2M1P5 1343 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 CCDC93Q567U6 631 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 FAM133BQ5BKY9 247 aaKnown RBP5.61□□□□□ -1.51
RTN4-215ENST00000491592 RPRD2Q5VT52 1461 aaKnown RBP5.61□□□□□ -1.51
RTN4-215ENST00000491592 VASNQ6EMK4 673 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 TTLL10Q6ZVT0 673 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 PROSER1Q86XN7 944 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 OTUD6BQ8N6M0 293 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 EFHBQ8N7U6 833 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 NGDNQ8NEJ9 315 aaKnown RBP5.61□□□□□ -1.51
RTN4-215ENST00000491592 PPHLN1Q8NEY8 458 aaKnown RBP5.61□□□□□ -1.51
RTN4-215ENST00000491592 CTTNBP2Q8WZ74 1663 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 KCNN1Q92952 543 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 MYCBPQ99417 103 aaPredicted RBP5.61□□□□□ -1.51
RTN4-215ENST00000491592 TTC1Q99614 292 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 SELENOOQ9BVL4 669 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 CHMP4BQ9H444 224 aaKnown RBP5.61□□□□□ -1.51
RTN4-215ENST00000491592 IFT22Q9H7X7 185 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 RBPJLQ9UBG7 517 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 IRAK3Q9Y616 596 aa5.61□□□□□ -1.51
RTN4-215ENST00000491592 KIF21AQ7Z4S6 1674 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 LRPPRCP42704 1394 aaKnown RBP5.6□□□□□ -1.51
RTN4-215ENST00000491592 DHX29Q7Z478 1369 aaKnown RBP5.6□□□□□ -1.51
RTN4-215ENST00000491592 SHTN1A0MZ66 631 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 RASSF10A6NK89 507 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 NEMP1O14524 444 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 FOXP2O15409 715 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 TCEA3O75764 348 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 FKBP9O95302 570 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 MMEP08473 750 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 CPEP16870 476 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 PI3P19957 117 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 ATICP31939 592 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 ITGA1P56199 1179 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 GEMIN4P57678 1058 aaKnown RBP5.6□□□□□ -1.51
RTN4-215ENST00000491592 HERVK_113P62684 666 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 SSPNQ14714 243 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 ALDH1L2Q3SY69 923 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 CATSPEREQ5SY80 951 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 HYIQ5T013 277 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 TMC5Q6UXY8 1006 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 LIPIQ6XZB0 460 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 ATG14Q6ZNE5 492 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 FKBP9P1Q75LS8 142 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 C14orf80Q86SX3 495 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 C11orf74Q86VG3 221 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 TMEFF1Q8IYR6 380 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 ENAHQ8N8S7 591 aaPredicted RBP5.6□□□□□ -1.51
RTN4-215ENST00000491592 ATL2Q8NHH9 583 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 TTC8Q8TAM2 541 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 MPHOSPH9Q99550 1183 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 LRRC27Q9C0I9 530 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 PCDH18Q9HCL0 1135 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 EMC7Q9NPA0 242 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 CD320Q9NPF0 282 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 SPTLC3Q9NUV7 552 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 CLIC5Q9NZA1 410 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 EVLQ9UI08 416 aaPredicted RBP5.6□□□□□ -1.51
RTN4-215ENST00000491592 TAGLN3Q9UI15 199 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 ISY1Q9ULR0 285 aaKnown RBP5.6□□□□□ -1.51
RTN4-215ENST00000491592 SYNPO2Q9UMS6 1093 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 SPO11Q9Y5K1 396 aa5.6□□□□□ -1.51
RTN4-215ENST00000491592 ARHGEF11O15085 1522 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 ZMYM4Q5VZL5 1548 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 UGGT2Q9NYU1 1516 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 SNAPC4Q5SXM2 1469 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 FHOD3Q2V2M9 1422 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 ROCK1Q13464 1354 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 ANKRD30BQ9BXX2 1392 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 ZNF839A8K0R7 811 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 NPIPB6E9PJ23 425 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 BRINP1O60477 761 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 HMMRO75330 724 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 EYA4O95677 639 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 PLA2G1BP04054 148 aaKnown RBP5.59□□□□□ -1.51
RTN4-215ENST00000491592 RPN1P04843 607 aaKnown RBP5.59□□□□□ -1.51
RTN4-215ENST00000491592 RBP3P10745 1247 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 SLC9A1P19634 815 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 MC4RP32245 332 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms