RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 GLT8D2Q9H1C3 349 aa12.66□□□□□ -0.38
CLCNKA-206ENST00000491433 SFXN1Q9H9B4 322 aa12.66□□□□□ -0.38
CLCNKA-206ENST00000491433 SENP2Q9HC62 589 aa12.66□□□□□ -0.38
CLCNKA-206ENST00000491433 DACT1Q9NYF0 836 aa12.66□□□□□ -0.38
CLCNKA-206ENST00000491433 TCEAL9Q9UHQ7 104 aa12.66□□□□□ -0.38
CLCNKA-206ENST00000491433 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.65□□□□□ -0.38
CLCNKA-206ENST00000491433 CCDC69A6NI79 296 aa12.65□□□□□ -0.38
CLCNKA-206ENST00000491433 SLC30A4O14863 429 aa12.65□□□□□ -0.38
CLCNKA-206ENST00000491433 GPR32O75388 356 aa12.65□□□□□ -0.38
CLCNKA-206ENST00000491433 ZNF76P36508 570 aa12.65□□□□□ -0.38
CLCNKA-206ENST00000491433 RING1Q06587 406 aa12.65□□□□□ -0.38
CLCNKA-206ENST00000491433 B4GALNT3Q6L9W6 998 aa12.65□□□□□ -0.38
CLCNKA-206ENST00000491433 ELMSAN1Q6PJG2 1045 aa12.65□□□□□ -0.38
CLCNKA-206ENST00000491433 NFXL1Q6ZNB6 911 aa12.65□□□□□ -0.38
CLCNKA-206ENST00000491433 NIPA1Q7RTP0 329 aa12.65□□□□□ -0.38
CLCNKA-206ENST00000491433 CKAP2LQ8IYA6 745 aa12.65□□□□□ -0.38
CLCNKA-206ENST00000491433 VPS52Q8N1B4 723 aa12.65□□□□□ -0.38
CLCNKA-206ENST00000491433 METTL13Q8N6R0 699 aa12.65□□□□□ -0.38
CLCNKA-206ENST00000491433 NETO1Q8TDF5 533 aa12.65□□□□□ -0.38
CLCNKA-206ENST00000491433 DDX1Q92499 740 aaKnown RBP12.65□□□□□ -0.38
CLCNKA-206ENST00000491433 AGO4Q9HCK5 861 aaKnown RBP12.65□□□□□ -0.38
CLCNKA-206ENST00000491433 WNT16Q9UBV4 365 aa12.65□□□□□ -0.38
CLCNKA-206ENST00000491433 CDH22Q9UJ99 828 aa12.65□□□□□ -0.38
CLCNKA-206ENST00000491433 A0A0U1RQF3 1178 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 TAF4O00268 1085 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 MEIS1O00470 390 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 STK25O00506 426 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 ARP10275 920 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 CTSAP10619 480 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 EIF4BP23588 611 aaKnown RBP12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 METAP2P50579 478 aaKnown RBP eCLIP12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 BCAR1P56945 870 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 NUCB1Q02818 461 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 PPP1R18Q6NYC8 613 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 UNQ6494/PRO21346Q6UXR6 183 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 GPR149Q86SP6 731 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 DDX53Q86TM3 631 aaKnown RBP12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 SIX5Q8N196 739 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 SRBD1Q8N5C6 995 aaKnown RBP12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 RNF169Q8NCN4 708 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 STAMQ92783 540 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 TMEM87BQ96K49 555 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 FAM167AQ96KS9 214 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 ZBP1Q9H171 429 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 LY9Q9HBG7 655 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 RNF19AQ9NV58 838 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 DPP7Q9UHL4 492 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 AKT3Q9Y243 479 aa12.64□□□□□ -0.39
CLCNKA-206ENST00000491433 hCG_1984214I3L0E3 225 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 SPTLC1O15269 473 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 PLEKHA8P1O95397 391 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 C22orf31O95567 290 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 VTNP04004 478 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 WEE2P0C1S8 567 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 SKIP12755 728 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 PBX3P40426 434 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 NLRP11P59045 1033 aaKnown RBP12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 CDC42EP1Q00587 391 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 ITGB3BPQ13352 177 aaPredicted RBP12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 AP3B2Q13367 1082 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 SWSAP1Q6NVH7 229 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 CYP26C1Q6V0L0 522 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 C15orf39Q6ZRI6 1047 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 PRR23BQ6ZRT6 265 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 HEATR3Q7Z4Q2 680 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 CCDC60Q8IWA6 550 aaPredicted RBP12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 MB21D2Q8IYB1 491 aaPredicted RBP12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 SMAP1Q8IYB5 467 aaPredicted RBP12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 C12orf76Q8N812 135 aaPredicted RBP12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 ZNF713Q8N859 430 aaPredicted RBP12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 KDF1Q8NAX2 398 aaPredicted RBP12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 HELQQ8TDG4 1101 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 NXPE3Q969Y0 559 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 PPP1R16BQ96T49 567 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 MYL10Q9BUA6 226 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 EMILIN2Q9BXX0 1053 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 KCNK12Q9HB15 430 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 RIC8AQ9NPQ8 531 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 CHST12Q9NRB3 414 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 TBC1D22BQ9NU19 505 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 ANKFY1Q9P2R3 1169 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 IGF2RP11717 2491 aa12.63□□□□□ -0.39
CLCNKA-206ENST00000491433 ZBTB42B2RXF5 422 aa12.62□□□□□ -0.39
CLCNKA-206ENST00000491433 DDX39AO00148 427 aaKnown RBP12.62□□□□□ -0.39
CLCNKA-206ENST00000491433 PSAPP07602 524 aa12.62□□□□□ -0.39
CLCNKA-206ENST00000491433 EPCAMP16422 314 aa12.62□□□□□ -0.39
CLCNKA-206ENST00000491433 MCM5P33992 734 aa12.62□□□□□ -0.39
CLCNKA-206ENST00000491433 ANTXR2P58335 489 aa12.62□□□□□ -0.39
CLCNKA-206ENST00000491433 TBC1D8BQ0IIM8 1120 aa12.62□□□□□ -0.39
CLCNKA-206ENST00000491433 CLLU1OSQ5K130 101 aa12.62□□□□□ -0.39
CLCNKA-206ENST00000491433 ZNF746Q6NUN9 644 aaPredicted RBP12.62□□□□□ -0.39
CLCNKA-206ENST00000491433 TMC5Q6UXY8 1006 aa12.62□□□□□ -0.39
CLCNKA-206ENST00000491433 SLC22A17Q8WUG5 538 aa12.62□□□□□ -0.39
CLCNKA-206ENST00000491433 SCLT1Q96NL6 688 aa12.62□□□□□ -0.39
CLCNKA-206ENST00000491433 ANO3Q9BYT9 981 aa12.62□□□□□ -0.39
CLCNKA-206ENST00000491433 MAFBQ9Y5Q3 323 aaPredicted RBP12.62□□□□□ -0.39
CLCNKA-206ENST00000491433 C1QTNF9BB2RNN3 333 aa12.61□□□□□ -0.39
CLCNKA-206ENST00000491433 NT5C1B-RDH14C9J2C7 533 aa12.61□□□□□ -0.39
CLCNKA-206ENST00000491433 ZC3H11AO75152 810 aaKnown RBP eCLIP12.61□□□□□ -0.39
CLCNKA-206ENST00000491433 CCNE2O96020 404 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms