RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 NCK2O43639 380 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 GNA14O95837 355 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 AGTP01019 485 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 SHBGP04278 402 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 HNRNPCP07910 306 aaKnown RBP eCLIP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 ITGA2BP08514 1039 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 HOXB7P09629 217 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 NUDT17P0C025 328 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 TRIM21P19474 475 aaKnown RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 MAGEA1P43355 309 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 MAPK8P45983 427 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 CD97P48960 835 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 TOB1P50616 345 aaPredicted RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 PLOD1Q02809 727 aaPredicted RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 PPARDQ03181 441 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 GRIN1Q05586 938 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 DHX9Q08211 1270 aaKnown RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 PKN1Q16512 942 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 LIN52Q52LA3 116 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 EPHA10Q5JZY3 1008 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 DAB2IPQ5VWQ8 1189 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 SPRYD7Q5W111 196 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 TMC3Q7Z5M5 1100 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 BPHLQ86WA6 291 aaPredicted RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 CCNJLQ8IV13 435 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 SMYD4Q8IYR2 804 aaPredicted RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 FITM2Q8N6M3 262 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 KBTBD3Q8NAB2 608 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 USP38Q8NB14 1042 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 FAM13CQ8NE31 585 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 LRRC8CQ8TDW0 803 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 SCFD2Q8WU76 684 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 SEC14L1Q92503 715 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 WASF1Q92558 559 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 KCNN1Q92952 543 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 GFM2Q969S9 779 aaKnown RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 UTP4Q969X6 686 aaKnown RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 GRAMD1AQ96CP6 724 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 EDC3Q96F86 508 aaKnown RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 DHTKD1Q96HY7 919 aaPredicted RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 DHRS1Q96LJ7 313 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 PSMB7Q99436 277 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 PRMT1Q99873 361 aaKnown RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 PYM1Q9BRP8 204 aaKnown RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 TMEM109Q9BVC6 243 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 PUS3Q9BZE2 481 aaKnown RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 CSRNP2Q9H175 543 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 DPH5Q9H2P9 285 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 FOXP1Q9H334 677 aaPredicted RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 DDX21Q9NR30 783 aaKnown RBP eCLIP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 STRN4Q9NRL3 753 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 EXOC1Q9NV70 894 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 TBCCD1Q9NVR7 557 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 NMRK1Q9NWW6 199 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 DBF4Q9UBU7 674 aaPredicted RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 PLAGL2Q9UPG8 496 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 TRIM33Q9UPN9 1127 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 R3HDM2Q9Y2K5 976 aaKnown RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 MYH10P35580 1976 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 MYH7BA7E2Y1 1941 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 A0A0J9YVX5 310 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 STRNO43815 780 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 SUPT3HO75486 399 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 EYA4O95677 639 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 ADH1BP00325 375 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 AFPP02771 609 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 PABPC4LP0CB38 370 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 ALOX15P16050 662 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 NAT1P18440 290 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 LTKP29376 864 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 HOXD12P35452 270 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 MLH1P40692 756 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 IARSP41252 1262 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 SERPINB8P50452 374 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 RASSF2P50749 326 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 SCNN1DP51172 638 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 KIF11P52732 1056 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 ADARP55265 1226 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 HPCAP84074 193 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 ADCY1Q08828 1119 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 ACVR2BQ13705 512 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 ITGA9Q13797 1035 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 CNGA2Q16280 664 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 RC3H1Q5TC82 1133 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 MEI1Q5TIA1 1274 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 ZNF658Q5TYW1 1059 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 OLFML1Q6UWY5 402 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 UNC13DQ70J99 1090 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 SCUBE1Q8IWY4 988 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 KLHL7Q8IXQ5 586 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 SLC15A3Q8IY34 581 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 MB21D2Q8IYB1 491 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 MYOCDQ8IZQ8 938 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 NME8Q8N427 588 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 ARL10Q8N8L6 244 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 PPFIBP2Q8ND30 876 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 SLC17A8Q8NDX2 589 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 NCOA7Q8NI08 942 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms