RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 USP28Q96RU2 1077 aa16.72■□□□□ 0.27
CXCL12-207ENST00000488591 YME1L1Q96TA2 773 aa16.72■□□□□ 0.27
CXCL12-207ENST00000488591 POLR3FQ9H1D9 316 aaPredicted RBP16.72■□□□□ 0.27
CXCL12-207ENST00000488591 PTPRSQ13332 1948 aa16.72■□□□□ 0.27
CXCL12-207ENST00000488591 LAMA3Q16787 3333 aa16.71■□□□□ 0.27
CXCL12-207ENST00000488591 E9PMD0 336 aa16.71■□□□□ 0.27
CXCL12-207ENST00000488591 MARCKSP29966 332 aaPredicted RBP16.71■□□□□ 0.27
CXCL12-207ENST00000488591 SARSP49591 514 aaKnown RBP16.71■□□□□ 0.27
CXCL12-207ENST00000488591 POU5F1BQ06416 359 aa16.71■□□□□ 0.27
CXCL12-207ENST00000488591 SLC39A14Q15043 492 aa16.71■□□□□ 0.27
CXCL12-207ENST00000488591 STK38Q15208 465 aa16.71■□□□□ 0.27
CXCL12-207ENST00000488591 CATSPER4Q7RTX7 472 aa16.71■□□□□ 0.27
CXCL12-207ENST00000488591 NPAS4Q8IUM7 802 aa16.71■□□□□ 0.27
CXCL12-207ENST00000488591 LINC01599Q8WXQ3 324 aa16.71■□□□□ 0.27
CXCL12-207ENST00000488591 TTYH1Q9H313 450 aaPredicted RBP16.71■□□□□ 0.27
CXCL12-207ENST00000488591 IFT122Q9HBG6 1241 aa16.71■□□□□ 0.27
CXCL12-207ENST00000488591 CHST12Q9NRB3 414 aa16.71■□□□□ 0.27
CXCL12-207ENST00000488591 MTMR10Q9NXD2 777 aa16.71■□□□□ 0.27
CXCL12-207ENST00000488591 DACT1Q9NYF0 836 aa16.71■□□□□ 0.27
CXCL12-207ENST00000488591 PCDHB7Q9Y5E2 793 aa16.71■□□□□ 0.27
CXCL12-207ENST00000488591 SRPRBQ9Y5M8 271 aaKnown RBP16.71■□□□□ 0.27
CXCL12-207ENST00000488591 MGEA5O60502 916 aa16.7■□□□□ 0.26
CXCL12-207ENST00000488591 CSDE1O75534 798 aaKnown RBP16.7■□□□□ 0.26
CXCL12-207ENST00000488591 FGFR4P22455 802 aa16.7■□□□□ 0.26
CXCL12-207ENST00000488591 TXLNAP40222 546 aa16.7■□□□□ 0.26
CXCL12-207ENST00000488591 NASPP49321 788 aaPredicted RBP16.7■□□□□ 0.26
CXCL12-207ENST00000488591 HTRA4P83105 476 aaPredicted RBP16.7■□□□□ 0.26
CXCL12-207ENST00000488591 NCBP1Q09161 790 aaKnown RBP16.7■□□□□ 0.26
CXCL12-207ENST00000488591 PCBP1Q15365 356 aaKnown RBP eCLIP16.7■□□□□ 0.26
CXCL12-207ENST00000488591 ATL3Q6DD88 541 aa16.7■□□□□ 0.26
CXCL12-207ENST00000488591 KRI1Q8N9T8 703 aaKnown RBP16.7■□□□□ 0.26
CXCL12-207ENST00000488591 PNMA5Q96PV4 448 aa16.7■□□□□ 0.26
CXCL12-207ENST00000488591 PLIN2Q99541 437 aa16.7■□□□□ 0.26
CXCL12-207ENST00000488591 CSRNP2Q9H175 543 aa16.7■□□□□ 0.26
CXCL12-207ENST00000488591 TFIP11Q9UBB9 837 aaKnown RBP16.7■□□□□ 0.26
CXCL12-207ENST00000488591 MORC2Q9Y6X9 1032 aaPredicted RBP16.7■□□□□ 0.26
CXCL12-207ENST00000488591 LAMA2P24043 3122 aaKnown RBP16.7■□□□□ 0.26
CXCL12-207ENST00000488591 ERLIN2O94905 339 aa16.69■□□□□ 0.26
CXCL12-207ENST00000488591 SSBP05455 408 aaKnown RBP eCLIP16.69■□□□□ 0.26
CXCL12-207ENST00000488591 IBSPP21815 317 aaPredicted RBP16.69■□□□□ 0.26
CXCL12-207ENST00000488591 GLRA2P23416 452 aa16.69■□□□□ 0.26
CXCL12-207ENST00000488591 PTENP60484 403 aa16.69■□□□□ 0.26
CXCL12-207ENST00000488591 GRIN1Q05586 938 aa16.69■□□□□ 0.26
CXCL12-207ENST00000488591 GRB10Q13322 594 aa16.69■□□□□ 0.26
CXCL12-207ENST00000488591 DSC3Q14574 896 aa16.69■□□□□ 0.26
CXCL12-207ENST00000488591 PPP2R5AQ15172 486 aa16.69■□□□□ 0.26
CXCL12-207ENST00000488591 ASAP3Q8TDY4 903 aa16.69■□□□□ 0.26
CXCL12-207ENST00000488591 KIFAP3Q92845 792 aa16.69■□□□□ 0.26
CXCL12-207ENST00000488591 IFT74Q96LB3 600 aa16.69■□□□□ 0.26
CXCL12-207ENST00000488591 GPRC5CQ9NQ84 441 aa16.69■□□□□ 0.26
CXCL12-207ENST00000488591 DAXXQ9UER7 740 aaPredicted RBP16.69■□□□□ 0.26
CXCL12-207ENST00000488591 CCDC39Q9UFE4 941 aa16.69■□□□□ 0.26
CXCL12-207ENST00000488591 FBXO2Q9UK22 296 aaPredicted RBP16.69■□□□□ 0.26
CXCL12-207ENST00000488591 CFAP45Q9UL16 551 aa16.69■□□□□ 0.26
CXCL12-207ENST00000488591 TTC3P53804 2025 aa16.69■□□□□ 0.26
CXCL12-207ENST00000488591 MYH15Q9Y2K3 1946 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 LCHNA4D1U4 455 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 LRRIQ4A6NIV6 560 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 C9IYK1 514 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 INO80B-WBP1J3KQ70 363 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 SPTLC2O15270 562 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 YEATS4O95619 227 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 SKIP12755 728 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 FAM189BP81408 668 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 TAP1Q03518 808 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 PKP1Q13835 747 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 CAPSQ13938 189 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 GRIN2CQ14957 1233 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 FOXD4L6Q3SYB3 417 aaPredicted RBP16.68■□□□□ 0.26
CXCL12-207ENST00000488591 TMEM119Q4V9L6 283 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 FOXD4L3Q6VB84 417 aaPredicted RBP16.68■□□□□ 0.26
CXCL12-207ENST00000488591 KCNK18Q7Z418 384 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 IFNLR1Q8IU57 520 aaPredicted RBP16.68■□□□□ 0.26
CXCL12-207ENST00000488591 ZBTB8OSQ8IWT0 167 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 SYT2Q8N9I0 419 aaPredicted RBP16.68■□□□□ 0.26
CXCL12-207ENST00000488591 LINC00301Q8NCQ3 95 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 TIPINQ9BVW5 301 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 NFKBIZQ9BYH8 718 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 CCSER1Q9C0I3 900 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 C2orf40Q9H1Z8 148 aa16.68■□□□□ 0.26
CXCL12-207ENST00000488591 ELAC1Q9H777 363 aaKnown RBP16.68■□□□□ 0.26
CXCL12-207ENST00000488591 PIN4Q9Y237 131 aaKnown RBP16.68■□□□□ 0.26
CXCL12-207ENST00000488591 PPP6R2O75170 966 aa16.67■□□□□ 0.26
CXCL12-207ENST00000488591 DGKIO75912 1065 aa16.67■□□□□ 0.26
CXCL12-207ENST00000488591 PLA2G4BP0C869 781 aa16.67■□□□□ 0.26
CXCL12-207ENST00000488591 TWF2Q6IBS0 349 aaKnown RBP16.67■□□□□ 0.26
CXCL12-207ENST00000488591 RINT1Q6NUQ1 792 aa16.67■□□□□ 0.26
CXCL12-207ENST00000488591 FIBCD1Q8N539 461 aa16.67■□□□□ 0.26
CXCL12-207ENST00000488591 DEPTORQ8TB45 409 aa16.67■□□□□ 0.26
CXCL12-207ENST00000488591 SP7Q8TDD2 431 aaPredicted RBP16.67■□□□□ 0.26
CXCL12-207ENST00000488591 DRC1Q96MC2 740 aa16.67■□□□□ 0.26
CXCL12-207ENST00000488591 CLIC6Q96NY7 704 aa16.67■□□□□ 0.26
CXCL12-207ENST00000488591 TGS1Q96RS0 853 aaKnown RBP16.67■□□□□ 0.26
CXCL12-207ENST00000488591 CDX2Q99626 313 aaPredicted RBP16.67■□□□□ 0.26
CXCL12-207ENST00000488591 MINDY3Q9H8M7 445 aa16.67■□□□□ 0.26
CXCL12-207ENST00000488591 TMEM161AQ9NX61 479 aa16.67■□□□□ 0.26
CXCL12-207ENST00000488591 KCND2Q9NZV8 630 aa16.67■□□□□ 0.26
CXCL12-207ENST00000488591 ATP6V1DQ9Y5K8 247 aa16.67■□□□□ 0.26
CXCL12-207ENST00000488591 LINC01553A4QN01 128 aa16.66■□□□□ 0.26
CXCL12-207ENST00000488591 HOXA2O43364 376 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms