RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 MSCO60682 206 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 ADAMTS4O75173 837 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 RARBP10826 455 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 AKR1A1P14550 325 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 CHMLP26374 656 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 COPB2P35606 906 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 LIG3P49916 1009 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 BEX3Q00994 111 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 ACVR2BQ13705 512 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 UVSSAQ2YD98 709 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 CCDC144BQ3MJ40 725 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 USH1GQ495M9 461 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 CDPF1Q6NVV7 123 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 LLGL2Q6P1M3 1020 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 SLC39A5Q6ZMH5 540 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 PRR23CQ6ZRP0 262 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 CYB5R4Q7L1T6 521 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 FBXO16Q8IX29 292 aaPredicted RBP6.91□□□□□ -1.3
CDHR3-213ENST00000488386 FAM133AQ8N9E0 248 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 CHST13Q8NET6 341 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 PPP1R13LQ8WUF5 828 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 GAL3ST3Q96A11 431 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 KATNBL1Q9H079 304 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 RANBP17Q9H2T7 1088 aaKnown RBP6.91□□□□□ -1.3
CDHR3-213ENST00000488386 TCP11L1Q9NUJ3 509 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 ZSWIM5Q9P217 1185 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 AP4E1Q9UPM8 1137 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 CNPY2Q9Y2B0 182 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 DIS3Q9Y2L1 958 aaKnown RBP6.91□□□□□ -1.3
CDHR3-213ENST00000488386 PCDHB5Q9Y5E4 795 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 TNKSO95271 1327 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 DNAH12Q6ZR08 3092 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 MYH6P13533 1939 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 A0A1W2PQ45 241 aaPredicted RBP6.9□□□□□ -1.3
CDHR3-213ENST00000488386 A0A1W2PQY0 241 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 PTPDC1A2A3K4 754 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 TRIM43BA6NCK2 446 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 HIP1O00291 1037 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 GAS2O43903 313 aaKnown RBP6.9□□□□□ -1.3
CDHR3-213ENST00000488386 PQBP1O60828 265 aaKnown RBP6.9□□□□□ -1.3
CDHR3-213ENST00000488386 RECKO95980 971 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 ICAM1P05362 532 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 CYP21A2P08686 494 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 C6orf222P0C671 652 aaPredicted RBP6.9□□□□□ -1.3
CDHR3-213ENST00000488386 ITGB8P26012 769 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 CALML3P27482 149 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 OAZ1P54368 228 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 ZNF543Q08ER8 600 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 BAATQ14032 418 aaPredicted RBP6.9□□□□□ -1.3
CDHR3-213ENST00000488386 KCNA10Q16322 511 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 IMMTQ16891 758 aaKnown RBP6.9□□□□□ -1.3
CDHR3-213ENST00000488386 HP1BP3Q5SSJ5 553 aaPredicted RBP6.9□□□□□ -1.3
CDHR3-213ENST00000488386 MAMDC4Q6UXC1 1216 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 BTNL9Q6UXG8 535 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 STOX1Q6ZVD7 989 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 NOL8Q76FK4 1167 aaKnown RBP6.9□□□□□ -1.3
CDHR3-213ENST00000488386 Q7L0L9 218 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 FAM20CQ8IXL6 584 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 ENAHQ8N8S7 591 aaPredicted RBP6.9□□□□□ -1.3
CDHR3-213ENST00000488386 ARRDC4Q8NCT1 418 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 CLEC4DQ8WXI8 215 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 TBC1D5Q92609 795 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 ESR2Q92731 530 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 TRIM43Q96BQ3 446 aaPredicted RBP6.9□□□□□ -1.3
CDHR3-213ENST00000488386 DSCC1Q9BVC3 393 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 EMILIN2Q9BXX0 1053 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 RNF41Q9H4P4 317 aaPredicted RBP6.9□□□□□ -1.3
CDHR3-213ENST00000488386 VAT1LQ9HCJ6 419 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 RAD18Q9NS91 495 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 FAM105AQ9NUU6 356 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 CYP39A1Q9NYL5 469 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 FBXO40Q9UH90 709 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 SYNPO2Q9UMS6 1093 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 TLR6Q9Y2C9 796 aa6.9□□□□□ -1.3
CDHR3-213ENST00000488386 RANBP2P49792 3224 aaKnown RBP6.9□□□□□ -1.31
CDHR3-213ENST00000488386 CTAGE5O15320 804 aa6.89□□□□□ -1.31
CDHR3-213ENST00000488386 DHX16O60231 1041 aaKnown RBP6.89□□□□□ -1.31
CDHR3-213ENST00000488386 PLA2G6O60733 806 aa6.89□□□□□ -1.31
CDHR3-213ENST00000488386 H2AFB1P0C5Y9 115 aa6.89□□□□□ -1.31
CDHR3-213ENST00000488386 H2AFB2P0C5Z0 115 aa6.89□□□□□ -1.31
CDHR3-213ENST00000488386 SNHG28P0DPA3 235 aa6.89□□□□□ -1.31
CDHR3-213ENST00000488386 ACLYP53396 1101 aa6.89□□□□□ -1.31
CDHR3-213ENST00000488386 TLE2Q04725 743 aa6.89□□□□□ -1.31
CDHR3-213ENST00000488386 SEPT6Q14141 434 aa6.89□□□□□ -1.31
CDHR3-213ENST00000488386 CDC37Q16543 378 aaPredicted RBP6.89□□□□□ -1.31
CDHR3-213ENST00000488386 C9orf50Q5SZB4 431 aa6.89□□□□□ -1.31
CDHR3-213ENST00000488386 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.89□□□□□ -1.31
CDHR3-213ENST00000488386 DYMQ7RTS9 669 aa6.89□□□□□ -1.31
CDHR3-213ENST00000488386 RNF180Q86T96 592 aa6.89□□□□□ -1.31
CDHR3-213ENST00000488386 RAB11FIP4Q86YS3 637 aa6.89□□□□□ -1.31
CDHR3-213ENST00000488386 PIBF1Q8WXW3 757 aa6.89□□□□□ -1.31
CDHR3-213ENST00000488386 BADQ92934 168 aa6.89□□□□□ -1.31
CDHR3-213ENST00000488386 NOC4LQ9BVI4 516 aaKnown RBP6.89□□□□□ -1.31
CDHR3-213ENST00000488386 SEMA6BQ9H3T3 888 aa6.89□□□□□ -1.31
CDHR3-213ENST00000488386 GSX1Q9H4S2 264 aaPredicted RBP6.89□□□□□ -1.31
CDHR3-213ENST00000488386 KAT14Q9H8E8 782 aa6.89□□□□□ -1.31
CDHR3-213ENST00000488386 PDLIM7Q9NR12 457 aa6.89□□□□□ -1.31
CDHR3-213ENST00000488386 CRIM1Q9NZV1 1036 aa6.89□□□□□ -1.31
CDHR3-213ENST00000488386 KIAA1522Q9P206 1035 aaPredicted RBP6.89□□□□□ -1.31
CDHR3-213ENST00000488386 FAM184BQ9ULE4 1060 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms