RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 WDR5P61964 334 aaKnown RBP19.03■□□□□ 0.64
SHROOM1-205ENST00000488072 E2F4Q16254 413 aa19.03■□□□□ 0.64
SHROOM1-205ENST00000488072 RESP18Q5W5W9 173 aa19.03■□□□□ 0.64
SHROOM1-205ENST00000488072 GPBP1Q86WP2 473 aa19.03■□□□□ 0.64
SHROOM1-205ENST00000488072 GOLPH3LQ9H4A5 285 aa19.03■□□□□ 0.64
SHROOM1-205ENST00000488072 CHMP5Q9NZZ3 219 aa19.03■□□□□ 0.64
SHROOM1-205ENST00000488072 CIZ1Q9ULV3 898 aaPredicted RBP19.03■□□□□ 0.64
SHROOM1-205ENST00000488072 PPME1Q9Y570 386 aa19.03■□□□□ 0.64
SHROOM1-205ENST00000488072 ADGRA3Q8IWK6 1321 aa19.02■□□□□ 0.64
SHROOM1-205ENST00000488072 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.02■□□□□ 0.64
SHROOM1-205ENST00000488072 TTLL13PA6NNM8 815 aa19.02■□□□□ 0.64
SHROOM1-205ENST00000488072 ENPP3O14638 875 aa19.02■□□□□ 0.64
SHROOM1-205ENST00000488072 MYOGP15173 224 aa19.02■□□□□ 0.64
SHROOM1-205ENST00000488072 CASP1P29466 404 aa19.02■□□□□ 0.64
SHROOM1-205ENST00000488072 PAK2Q13177 524 aa19.02■□□□□ 0.64
SHROOM1-205ENST00000488072 HABP4Q5JVS0 413 aaKnown RBP19.02■□□□□ 0.64
SHROOM1-205ENST00000488072 TCP11Q8WWU5 503 aa19.02■□□□□ 0.64
SHROOM1-205ENST00000488072 DHX58Q96C10 678 aa19.02■□□□□ 0.64
SHROOM1-205ENST00000488072 LRCH3Q96II8 777 aa19.02■□□□□ 0.64
SHROOM1-205ENST00000488072 JPH2Q9BR39 696 aaPredicted RBP19.02■□□□□ 0.64
SHROOM1-205ENST00000488072 NT5C3AQ9H0P0 336 aa19.02■□□□□ 0.64
SHROOM1-205ENST00000488072 MYMKA6NI61 221 aa19.01■□□□□ 0.63
SHROOM1-205ENST00000488072 EIF4BP23588 611 aaKnown RBP19.01■□□□□ 0.63
SHROOM1-205ENST00000488072 GRAMD1CQ8IYS0 662 aa19.01■□□□□ 0.63
SHROOM1-205ENST00000488072 LARP4BQ92615 738 aaKnown RBP19.01■□□□□ 0.63
SHROOM1-205ENST00000488072 REEP2Q9BRK0 252 aa19.01■□□□□ 0.63
SHROOM1-205ENST00000488072 GCOM2Q9BZD3 368 aaPredicted RBP19.01■□□□□ 0.63
SHROOM1-205ENST00000488072 CCDC39Q9UFE4 941 aa19.01■□□□□ 0.63
SHROOM1-205ENST00000488072 LRRIQ4A6NIV6 560 aa19■□□□□ 0.63
SHROOM1-205ENST00000488072 POLR2DO15514 142 aaKnown RBP19■□□□□ 0.63
SHROOM1-205ENST00000488072 GADD45BO75293 160 aaPredicted RBP19■□□□□ 0.63
SHROOM1-205ENST00000488072 ARHGEF15O94989 841 aa19■□□□□ 0.63
SHROOM1-205ENST00000488072 UPP2O95045 317 aa19■□□□□ 0.63
SHROOM1-205ENST00000488072 PARNO95453 639 aaKnown RBP19■□□□□ 0.63
SHROOM1-205ENST00000488072 PFKMP08237 780 aa19■□□□□ 0.63
SHROOM1-205ENST00000488072 LIG1P18858 919 aa19■□□□□ 0.63
SHROOM1-205ENST00000488072 STAT6P42226 847 aa19■□□□□ 0.63
SHROOM1-205ENST00000488072 PTENP60484 403 aa19■□□□□ 0.63
SHROOM1-205ENST00000488072 IKBKEQ14164 716 aa19■□□□□ 0.63
SHROOM1-205ENST00000488072 DSC3Q14574 896 aa19■□□□□ 0.63
SHROOM1-205ENST00000488072 DYMQ7RTS9 669 aa19■□□□□ 0.63
SHROOM1-205ENST00000488072 SPRED2Q7Z698 418 aa19■□□□□ 0.63
SHROOM1-205ENST00000488072 CDR2LQ86X02 465 aaPredicted RBP19■□□□□ 0.63
SHROOM1-205ENST00000488072 MCPH1Q8NEM0 835 aa19■□□□□ 0.63
SHROOM1-205ENST00000488072 ATP6V1DQ9Y5K8 247 aa19■□□□□ 0.63
SHROOM1-205ENST00000488072 SLC4A7Q9Y6M7 1214 aa19■□□□□ 0.63
SHROOM1-205ENST00000488072 LOXHD1Q8IVV2 1947 aa19■□□□□ 0.63
SHROOM1-205ENST00000488072 B4GALT5O43286 388 aa18.99■□□□□ 0.63
SHROOM1-205ENST00000488072 SLC26A4O43511 780 aa18.99■□□□□ 0.63
SHROOM1-205ENST00000488072 ACTN1P12814 892 aa18.99■□□□□ 0.63
SHROOM1-205ENST00000488072 PFKFB1P16118 471 aa18.99■□□□□ 0.63
SHROOM1-205ENST00000488072 TXLNAP40222 546 aa18.99■□□□□ 0.63
SHROOM1-205ENST00000488072 GATMP50440 423 aa18.99■□□□□ 0.63
SHROOM1-205ENST00000488072 PEX3P56589 373 aa18.99■□□□□ 0.63
SHROOM1-205ENST00000488072 MBTD1Q05BQ5 628 aa18.99■□□□□ 0.63
SHROOM1-205ENST00000488072 GIT2Q14161 759 aa18.99■□□□□ 0.63
SHROOM1-205ENST00000488072 ZNF410Q86VK4 478 aa18.99■□□□□ 0.63
SHROOM1-205ENST00000488072 MYOCDQ8IZQ8 938 aa18.99■□□□□ 0.63
SHROOM1-205ENST00000488072 CPB2Q96IY4 423 aa18.99■□□□□ 0.63
SHROOM1-205ENST00000488072 SERTAD1Q9UHV2 236 aa18.99■□□□□ 0.63
SHROOM1-205ENST00000488072 YBX2Q9Y2T7 364 aaKnown RBP18.99■□□□□ 0.63
SHROOM1-205ENST00000488072 TCHHQ07283 1943 aa18.98■□□□□ 0.63
SHROOM1-205ENST00000488072 ABHD14A-ACY1A0A1B0GW23 586 aa18.98■□□□□ 0.63
SHROOM1-205ENST00000488072 GAS2O43903 313 aaKnown RBP18.98■□□□□ 0.63
SHROOM1-205ENST00000488072 RPLP2P05387 115 aaKnown RBP18.98■□□□□ 0.63
SHROOM1-205ENST00000488072 GUCY2CP25092 1073 aa18.98■□□□□ 0.63
SHROOM1-205ENST00000488072 NDUFA8P51970 172 aa18.98■□□□□ 0.63
SHROOM1-205ENST00000488072 AMHR2Q16671 573 aa18.98■□□□□ 0.63
SHROOM1-205ENST00000488072 LONRF3Q496Y0 759 aa18.98■□□□□ 0.63
SHROOM1-205ENST00000488072 ADALQ6DHV7 355 aa18.98■□□□□ 0.63
SHROOM1-205ENST00000488072 CCDC73Q6ZRK6 1079 aa18.98■□□□□ 0.63
SHROOM1-205ENST00000488072 CATSPER4Q7RTX7 472 aa18.98■□□□□ 0.63
SHROOM1-205ENST00000488072 EXOC8Q8IYI6 725 aa18.98■□□□□ 0.63
SHROOM1-205ENST00000488072 FSIP1Q8NA03 581 aa18.98■□□□□ 0.63
SHROOM1-205ENST00000488072 ADAM2Q99965 735 aa18.98■□□□□ 0.63
SHROOM1-205ENST00000488072 SCAND2PQ9GZW5 306 aaPredicted RBP18.98■□□□□ 0.63
SHROOM1-205ENST00000488072 KCNH3Q9ULD8 1083 aa18.98■□□□□ 0.63
SHROOM1-205ENST00000488072 SQORQ9Y6N5 450 aa18.98■□□□□ 0.63
SHROOM1-205ENST00000488072 LCHNA4D1U4 455 aa18.97■□□□□ 0.63
SHROOM1-205ENST00000488072 CCDC169A6NNP5 214 aa18.97■□□□□ 0.63
SHROOM1-205ENST00000488072 INO80B-WBP1J3KQ70 363 aa18.97■□□□□ 0.63
SHROOM1-205ENST00000488072 SLC16A4O15374 487 aa18.97■□□□□ 0.63
SHROOM1-205ENST00000488072 ASAP2O43150 1006 aa18.97■□□□□ 0.63
SHROOM1-205ENST00000488072 ATP2A2P16615 1042 aaKnown RBP18.97■□□□□ 0.63
SHROOM1-205ENST00000488072 CMA1P23946 247 aa18.97■□□□□ 0.63
SHROOM1-205ENST00000488072 HOXA11P31270 313 aaPredicted RBP18.97■□□□□ 0.63
SHROOM1-205ENST00000488072 NPTX2P47972 431 aa18.97■□□□□ 0.63
SHROOM1-205ENST00000488072 MXD4Q14582 209 aaPredicted RBP18.97■□□□□ 0.63
SHROOM1-205ENST00000488072 TAS1R3Q7RTX0 852 aa18.97■□□□□ 0.63
SHROOM1-205ENST00000488072 DNAJC19Q96DA6 116 aa18.97■□□□□ 0.63
SHROOM1-205ENST00000488072 INO80BQ9C086 356 aaPredicted RBP18.97■□□□□ 0.63
SHROOM1-205ENST00000488072 BLZF1Q9H2G9 400 aa18.97■□□□□ 0.63
SHROOM1-205ENST00000488072 ZHX3Q9H4I2 956 aa18.97■□□□□ 0.63
SHROOM1-205ENST00000488072 STK17AQ9UEE5 414 aa18.97■□□□□ 0.63
SHROOM1-205ENST00000488072 HPSEQ9Y251 543 aa18.97■□□□□ 0.63
SHROOM1-205ENST00000488072 PTPRSQ13332 1948 aa18.97■□□□□ 0.63
SHROOM1-205ENST00000488072 GPR182O15218 404 aa18.96■□□□□ 0.63
SHROOM1-205ENST00000488072 TSPAN1O60635 241 aa18.96■□□□□ 0.63
SHROOM1-205ENST00000488072 BAIAP3O94812 1187 aa18.96■□□□□ 0.63
SHROOM1-205ENST00000488072 AFMP43652 599 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms