RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 TRAPPC10P48553 1259 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 KCNQ1P51787 676 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 LAMTOR4Q0VGL1 99 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 CAMK1Q14012 370 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 EMC2Q15006 297 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 NAALADL2Q58DX5 795 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 TTC38Q5R3I4 469 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 ECHDC2Q86YB7 292 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 KLHL23Q8NBE8 558 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 SPPL3Q8TCT6 385 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 ADAMTS19Q8TE59 1207 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 TCP11Q8WWU5 503 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 PSPC1Q8WXF1 523 aaKnown RBP12.78□□□□□ -0.36
SPEN-205ENST00000487496 TMEM117Q9H0C3 514 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 NSUN3Q9H649 340 aaKnown RBP12.78□□□□□ -0.36
SPEN-205ENST00000487496 XPNPEP1Q9NQW7 623 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 RNF19AQ9NV58 838 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 TYW1Q9NV66 732 aaKnown RBP12.78□□□□□ -0.36
SPEN-205ENST00000487496 DACT1Q9NYF0 836 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 NLRC5Q86WI3 1866 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 VCANP13611 3396 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 TTC28Q96AY4 2481 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 A0A087WWV3 80 aa12.77□□□□□ -0.37
SPEN-205ENST00000487496 ASAP2O43150 1006 aa12.77□□□□□ -0.37
SPEN-205ENST00000487496 HOXA2O43364 376 aa12.77□□□□□ -0.37
SPEN-205ENST00000487496 GAS2O43903 313 aaKnown RBP12.77□□□□□ -0.37
SPEN-205ENST00000487496 EOMESO95936 686 aa12.77□□□□□ -0.37
SPEN-205ENST00000487496 ITGB1P05556 798 aa12.77□□□□□ -0.37
SPEN-205ENST00000487496 OR52Z1P0C646 297 aa12.77□□□□□ -0.37
SPEN-205ENST00000487496 SPATA31C1P0DKV0 1188 aa12.77□□□□□ -0.37
SPEN-205ENST00000487496 XRCC6P12956 609 aaKnown RBP eCLIP12.77□□□□□ -0.37
SPEN-205ENST00000487496 TECP42680 631 aa12.77□□□□□ -0.37
SPEN-205ENST00000487496 MCM2P49736 904 aa12.77□□□□□ -0.37
SPEN-205ENST00000487496 TOB1P50616 345 aaPredicted RBP12.77□□□□□ -0.37
SPEN-205ENST00000487496 NBR1Q14596 966 aa12.77□□□□□ -0.37
SPEN-205ENST00000487496 TCEAL5Q5H9L2 206 aa12.77□□□□□ -0.37
SPEN-205ENST00000487496 CATSPER4Q7RTX7 472 aa12.77□□□□□ -0.37
SPEN-205ENST00000487496 ZNF598Q86UK7 904 aaKnown RBP12.77□□□□□ -0.37
SPEN-205ENST00000487496 FERMT3Q86UX7 667 aa12.77□□□□□ -0.37
SPEN-205ENST00000487496 CATSPER3Q86XQ3 398 aa12.77□□□□□ -0.37
SPEN-205ENST00000487496 RNF169Q8NCN4 708 aa12.77□□□□□ -0.37
SPEN-205ENST00000487496 PIGOQ8TEQ8 1089 aa12.77□□□□□ -0.37
SPEN-205ENST00000487496 MTRQ99707 1265 aa12.77□□□□□ -0.37
SPEN-205ENST00000487496 TRAIPQ9BWF2 469 aa12.77□□□□□ -0.37
SPEN-205ENST00000487496 UBE2ZQ9H832 354 aaPredicted RBP12.77□□□□□ -0.37
SPEN-205ENST00000487496 HCSTQ9UBK5 93 aa12.77□□□□□ -0.37
SPEN-205ENST00000487496 NOL7Q9UMY1 257 aaKnown RBP12.77□□□□□ -0.37
SPEN-205ENST00000487496 KIF3AQ9Y496 699 aa12.77□□□□□ -0.37
SPEN-205ENST00000487496 MED24O75448 989 aa12.76□□□□□ -0.37
SPEN-205ENST00000487496 DGAT1O75907 488 aa12.76□□□□□ -0.37
SPEN-205ENST00000487496 ATF7P17544 494 aaPredicted RBP12.76□□□□□ -0.37
SPEN-205ENST00000487496 DNAJB1P25685 340 aa12.76□□□□□ -0.37
SPEN-205ENST00000487496 RARRES1P49788 294 aa12.76□□□□□ -0.37
SPEN-205ENST00000487496 CLLU1OSQ5K130 101 aa12.76□□□□□ -0.37
SPEN-205ENST00000487496 SPOUT1Q5T280 376 aaKnown RBP12.76□□□□□ -0.37
SPEN-205ENST00000487496 LRRC55Q6ZSA7 311 aa12.76□□□□□ -0.37
SPEN-205ENST00000487496 SRGAP1Q7Z6B7 1085 aa12.76□□□□□ -0.37
SPEN-205ENST00000487496 C4orf32Q8N8J7 132 aa12.76□□□□□ -0.37
SPEN-205ENST00000487496 RNF149Q8NC42 400 aa12.76□□□□□ -0.37
SPEN-205ENST00000487496 POF1BQ8WVV4 589 aa12.76□□□□□ -0.37
SPEN-205ENST00000487496 CASD1Q96PB1 797 aa12.76□□□□□ -0.37
SPEN-205ENST00000487496 POLR3CQ9BUI4 534 aaPredicted RBP12.76□□□□□ -0.37
SPEN-205ENST00000487496 CWH43Q9H720 699 aa12.76□□□□□ -0.37
SPEN-205ENST00000487496 MINDY3Q9H8M7 445 aa12.76□□□□□ -0.37
SPEN-205ENST00000487496 TUFT1Q9NNX1 390 aa12.76□□□□□ -0.37
SPEN-205ENST00000487496 AAASQ9NRG9 546 aa12.76□□□□□ -0.37
SPEN-205ENST00000487496 PIN4Q9Y237 131 aaKnown RBP12.76□□□□□ -0.37
SPEN-205ENST00000487496 PCDHB12Q9Y5F1 795 aa12.76□□□□□ -0.37
SPEN-205ENST00000487496 MYO7AQ13402 2215 aa12.76□□□□□ -0.37
SPEN-205ENST00000487496 CSPG5O95196 566 aa12.75□□□□□ -0.37
SPEN-205ENST00000487496 KCNA5P22460 613 aa12.75□□□□□ -0.37
SPEN-205ENST00000487496 GJB2P29033 226 aa12.75□□□□□ -0.37
SPEN-205ENST00000487496 PHKA2P46019 1235 aa12.75□□□□□ -0.37
SPEN-205ENST00000487496 MXD4Q14582 209 aaPredicted RBP12.75□□□□□ -0.37
SPEN-205ENST00000487496 COL19A1Q14993 1142 aa12.75□□□□□ -0.37
SPEN-205ENST00000487496 TWF2Q6IBS0 349 aaKnown RBP12.75□□□□□ -0.37
SPEN-205ENST00000487496 ABI1Q8IZP0 508 aa12.75□□□□□ -0.37
SPEN-205ENST00000487496 COLGALT1Q8NBJ5 622 aa12.75□□□□□ -0.37
SPEN-205ENST00000487496 CCDC43Q96MW1 224 aaKnown RBP12.75□□□□□ -0.37
SPEN-205ENST00000487496 NACC1Q96RE7 527 aa12.75□□□□□ -0.37
SPEN-205ENST00000487496 UHRF1Q96T88 793 aaPredicted RBP12.75□□□□□ -0.37
SPEN-205ENST00000487496 BRWD1Q9NSI6 2320 aa12.75□□□□□ -0.37
SPEN-205ENST00000487496 AGPAT5Q9NUQ2 364 aa12.75□□□□□ -0.37
SPEN-205ENST00000487496 PCDHB6Q9Y5E3 794 aa12.75□□□□□ -0.37
SPEN-205ENST00000487496 FNDC1Q4ZHG4 1894 aaPredicted RBP12.74□□□□□ -0.37
SPEN-205ENST00000487496 ZNF623O75123 536 aa12.74□□□□□ -0.37
SPEN-205ENST00000487496 FGF18O76093 207 aa12.74□□□□□ -0.37
SPEN-205ENST00000487496 SKIP12755 728 aa12.74□□□□□ -0.37
SPEN-205ENST00000487496 LAG3P18627 525 aa12.74□□□□□ -0.37
SPEN-205ENST00000487496 RPA1P27694 616 aa12.74□□□□□ -0.37
SPEN-205ENST00000487496 HOXA11P31270 313 aaPredicted RBP12.74□□□□□ -0.37
SPEN-205ENST00000487496 IRS1P35568 1242 aa12.74□□□□□ -0.37
SPEN-205ENST00000487496 ARL2P36404 184 aa12.74□□□□□ -0.37
SPEN-205ENST00000487496 FXR2P51116 673 aaKnown RBP eCLIP12.74□□□□□ -0.375e-8■■■□□ 15
SPEN-205ENST00000487496 PTENP60484 403 aa12.74□□□□□ -0.37
SPEN-205ENST00000487496 UBE3AQ05086 875 aa12.74□□□□□ -0.37
SPEN-205ENST00000487496 POU5F1BQ06416 359 aa12.74□□□□□ -0.37
SPEN-205ENST00000487496 HYAL1Q12794 435 aa12.74□□□□□ -0.37
SPEN-205ENST00000487496 PTGDRQ13258 359 aa12.74□□□□□ -0.37
SPEN-205ENST00000487496 CSPP1Q1MSJ5 1256 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms