RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 ZP2Q05996 745 aa13.94□□□□□ -0.18
SREBF1-215ENST00000487401 NR5A1Q13285 461 aa13.94□□□□□ -0.18
SREBF1-215ENST00000487401 TRIM29Q14134 588 aa13.94□□□□□ -0.18
SREBF1-215ENST00000487401 SMAD2Q15796 467 aaKnown RBP13.94□□□□□ -0.18
SREBF1-215ENST00000487401 ME3Q16798 604 aa13.94□□□□□ -0.18
SREBF1-215ENST00000487401 TWF2Q6IBS0 349 aaKnown RBP13.94□□□□□ -0.18
SREBF1-215ENST00000487401 NCAPH2Q6IBW4 605 aa13.94□□□□□ -0.18
SREBF1-215ENST00000487401 KCNT2Q6UVM3 1135 aa13.94□□□□□ -0.18
SREBF1-215ENST00000487401 LRRC55Q6ZSA7 311 aa13.94□□□□□ -0.18
SREBF1-215ENST00000487401 OTUD6AQ7L8S5 288 aa13.94□□□□□ -0.18
SREBF1-215ENST00000487401 MICAL3Q7RTP6 2002 aa13.94□□□□□ -0.18
SREBF1-215ENST00000487401 CATSPER4Q7RTX7 472 aa13.94□□□□□ -0.18
SREBF1-215ENST00000487401 MRPS27Q92552 414 aaKnown RBP13.94□□□□□ -0.18
SREBF1-215ENST00000487401 HAS1Q92839 578 aa13.94□□□□□ -0.18
SREBF1-215ENST00000487401 GTF3C6Q969F1 213 aa13.94□□□□□ -0.18
SREBF1-215ENST00000487401 NLRP4Q96MN2 994 aa13.94□□□□□ -0.18
SREBF1-215ENST00000487401 POP1Q99575 1024 aaKnown RBP13.94□□□□□ -0.18
SREBF1-215ENST00000487401 CDCA3Q99618 268 aaPredicted RBP13.94□□□□□ -0.18
SREBF1-215ENST00000487401 LRFN3Q9BTN0 628 aa13.94□□□□□ -0.18
SREBF1-215ENST00000487401 RNF19AQ9NV58 838 aa13.94□□□□□ -0.18
SREBF1-215ENST00000487401 RAPGEFL1Q9UHV5 662 aa13.94□□□□□ -0.18
SREBF1-215ENST00000487401 LZTS1Q9Y250 596 aa13.94□□□□□ -0.18
SREBF1-215ENST00000487401 PPME1Q9Y570 386 aa13.94□□□□□ -0.18
SREBF1-215ENST00000487401 PCDHGC5Q9Y5F6 944 aa13.94□□□□□ -0.18
SREBF1-215ENST00000487401 FSD2A1L4K1 749 aa13.93□□□□□ -0.18
SREBF1-215ENST00000487401 FAM86C2PA6NEL3 165 aa13.93□□□□□ -0.18
SREBF1-215ENST00000487401 GPR37L1O60883 481 aa13.93□□□□□ -0.18
SREBF1-215ENST00000487401 FDPSP14324 419 aaKnown RBP13.93□□□□□ -0.18
SREBF1-215ENST00000487401 RFC5P40937 340 aa13.93□□□□□ -0.18
SREBF1-215ENST00000487401 ERVFC1P60507 584 aa13.93□□□□□ -0.18
SREBF1-215ENST00000487401 PLCB3Q01970 1234 aa13.93□□□□□ -0.18
SREBF1-215ENST00000487401 EARS2Q5JPH6 523 aaKnown RBP13.93□□□□□ -0.18
SREBF1-215ENST00000487401 CLLU1OSQ5K130 101 aa13.93□□□□□ -0.18
SREBF1-215ENST00000487401 POTEDQ86YR6 584 aa13.93□□□□□ -0.18
SREBF1-215ENST00000487401 KSR1Q8IVT5 923 aa13.93□□□□□ -0.18
SREBF1-215ENST00000487401 HELQQ8TDG4 1101 aa13.93□□□□□ -0.18
SREBF1-215ENST00000487401 DYDC2Q96IM9 177 aa13.93□□□□□ -0.18
SREBF1-215ENST00000487401 LXNQ9BS40 222 aa13.93□□□□□ -0.18
SREBF1-215ENST00000487401 MRPL9Q9BYD2 267 aaKnown RBP13.93□□□□□ -0.18
SREBF1-215ENST00000487401 ZSWIM4Q9H7M6 989 aa13.93□□□□□ -0.18
SREBF1-215ENST00000487401 ENTPD7Q9NQZ7 604 aa13.93□□□□□ -0.18
SREBF1-215ENST00000487401 SPG21Q9NZD8 308 aa13.93□□□□□ -0.18
SREBF1-215ENST00000487401 RGL1Q9NZL6 768 aa13.93□□□□□ -0.18
SREBF1-215ENST00000487401 PIN4Q9Y237 131 aaKnown RBP13.93□□□□□ -0.18
SREBF1-215ENST00000487401 C19orf67A6NJJ6 358 aa13.92□□□□□ -0.18
SREBF1-215ENST00000487401 FSCN2O14926 492 aa13.92□□□□□ -0.18
SREBF1-215ENST00000487401 SRGAP2CP0DJJ0 459 aa13.92□□□□□ -0.18
SREBF1-215ENST00000487401 SRGAP2BP0DMP2 458 aa13.92□□□□□ -0.18
SREBF1-215ENST00000487401 YWHABP31946 246 aaKnown RBP13.92□□□□□ -0.18
SREBF1-215ENST00000487401 PHKA2P46019 1235 aa13.92□□□□□ -0.18
SREBF1-215ENST00000487401 FOSBP53539 338 aa13.92□□□□□ -0.18
SREBF1-215ENST00000487401 CALCRLQ16602 461 aa13.92□□□□□ -0.18
SREBF1-215ENST00000487401 PLPP4Q5VZY2 271 aa13.92□□□□□ -0.18
SREBF1-215ENST00000487401 TMC7Q7Z402 723 aa13.92□□□□□ -0.18
SREBF1-215ENST00000487401 ZNF598Q86UK7 904 aaKnown RBP13.92□□□□□ -0.18
SREBF1-215ENST00000487401 TPH2Q8IWU9 490 aa13.92□□□□□ -0.18
SREBF1-215ENST00000487401 C4orf19Q8IY42 314 aa13.92□□□□□ -0.18
SREBF1-215ENST00000487401 NSUN7Q8NE18 718 aaKnown RBP13.92□□□□□ -0.18
SREBF1-215ENST00000487401 PRPF31Q8WWY3 499 aaKnown RBP13.92□□□□□ -0.18
SREBF1-215ENST00000487401 PSPC1Q8WXF1 523 aaKnown RBP13.92□□□□□ -0.18
SREBF1-215ENST00000487401 TMEM143Q96AN5 459 aa13.92□□□□□ -0.18
SREBF1-215ENST00000487401 MSLNLQ96KJ4 702 aa13.92□□□□□ -0.18
SREBF1-215ENST00000487401 TCF25Q9BQ70 676 aa13.92□□□□□ -0.18
SREBF1-215ENST00000487401 NGRNQ9NPE2 291 aaKnown RBP13.92□□□□□ -0.18
SREBF1-215ENST00000487401 CLEC1BQ9P126 229 aa13.92□□□□□ -0.18
SREBF1-215ENST00000487401 COL4A3BPQ9Y5P4 624 aa13.92□□□□□ -0.18
SREBF1-215ENST00000487401 FAM205CA6NFA0 338 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 BTBD18B2RXH4 712 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 DCXO43602 365 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 GAS2O43903 313 aaKnown RBP13.91□□□□□ -0.18
SREBF1-215ENST00000487401 JAK2O60674 1132 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 LARGE1O95461 756 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 EYA4O95677 639 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 PBX3P40426 434 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 ALDH7A1P49419 539 aaKnown RBP13.91□□□□□ -0.18
SREBF1-215ENST00000487401 CYP4A11Q02928 519 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 LAMTOR4Q0VGL1 99 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 COASYQ13057 564 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 CTTNQ14247 550 aaKnown RBP13.91□□□□□ -0.18
SREBF1-215ENST00000487401 BMS1Q14692 1282 aaKnown RBP13.91□□□□□ -0.18
SREBF1-215ENST00000487401 DUSP6Q16828 381 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 LONRF3Q496Y0 759 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 XKR9Q5GH70 373 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 GLB1LQ6UWU2 654 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 DIS3L2Q8IYB7 885 aaKnown RBP13.91□□□□□ -0.18
SREBF1-215ENST00000487401 ZNF579Q8NAF0 562 aaKnown RBP13.91□□□□□ -0.18
SREBF1-215ENST00000487401 TCP11Q8WWU5 503 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 RSPH1Q8WYR4 309 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 PGBD4Q96DM1 585 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 TRAIPQ9BWF2 469 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 DHX33Q9H6R0 707 aaKnown RBP13.91□□□□□ -0.18
SREBF1-215ENST00000487401 WRAP73Q9P2S5 460 aaPredicted RBP13.91□□□□□ -0.18
SREBF1-215ENST00000487401 BARX2Q9UMQ3 279 aaPredicted RBP13.91□□□□□ -0.18
SREBF1-215ENST00000487401 PCDHA12Q9UN75 941 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 HCN4Q9Y3Q4 1203 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 SIP14410 1827 aa13.91□□□□□ -0.18
SREBF1-215ENST00000487401 TTC3P53804 2025 aa13.9□□□□□ -0.18
SREBF1-215ENST00000487401 ASAP2O43150 1006 aa13.9□□□□□ -0.18
SREBF1-215ENST00000487401 ATF7P17544 494 aaPredicted RBP13.9□□□□□ -0.18
SREBF1-215ENST00000487401 RAB27AP51159 221 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms