RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 LAG3P18627 525 aa27.53■■■□□ 2
LIME1-206ENST00000487026 CDC42EP1Q00587 391 aa27.53■■■□□ 2
LIME1-206ENST00000487026 SMAD2Q15796 467 aaKnown RBP27.53■■■□□ 2
LIME1-206ENST00000487026 ADHFE1Q8IWW8 467 aa27.53■■■□□ 2
LIME1-206ENST00000487026 ABI1Q8IZP0 508 aa27.53■■■□□ 2
LIME1-206ENST00000487026 HELQQ8TDG4 1101 aa27.53■■■□□ 2
LIME1-206ENST00000487026 WASF1Q92558 559 aa27.53■■■□□ 2
LIME1-206ENST00000487026 CYP26B1Q9NR63 512 aa27.53■■■□□ 2
LIME1-206ENST00000487026 PRKAG3Q9UGI9 489 aa27.53■■■□□ 2
LIME1-206ENST00000487026 FOSBP53539 338 aa27.52■■■□□ 2
LIME1-206ENST00000487026 RBM10P98175 930 aaKnown RBP27.52■■■□□ 2
LIME1-206ENST00000487026 SMAD4Q13485 552 aaKnown RBP27.52■■■□□ 2
LIME1-206ENST00000487026 GTF3C6Q969F1 213 aa27.52■■■□□ 2
LIME1-206ENST00000487026 MSLNLQ96KJ4 702 aa27.52■■■□□ 2
LIME1-206ENST00000487026 BARX2Q9UMQ3 279 aaPredicted RBP27.52■■■□□ 2
LIME1-206ENST00000487026 C19orf67A6NJJ6 358 aa27.51■■□□□ 1.99
LIME1-206ENST00000487026 GPR37L1O60883 481 aa27.51■■□□□ 1.99
LIME1-206ENST00000487026 GLP2RO95838 553 aa27.51■■□□□ 1.99
LIME1-206ENST00000487026 P4HBP07237 508 aaKnown RBP27.51■■□□□ 1.99
LIME1-206ENST00000487026 ATF7P17544 494 aaPredicted RBP27.51■■□□□ 1.99
LIME1-206ENST00000487026 KRT2P35908 639 aa27.51■■□□□ 1.99
LIME1-206ENST00000487026 CSPP1Q1MSJ5 1256 aa27.51■■□□□ 1.99
LIME1-206ENST00000487026 LONRF3Q496Y0 759 aa27.51■■□□□ 1.99
LIME1-206ENST00000487026 ERICH6BQ5W0A0 696 aa27.51■■□□□ 1.99
LIME1-206ENST00000487026 NCAPH2Q6IBW4 605 aa27.51■■□□□ 1.99
LIME1-206ENST00000487026 KCNT2Q6UVM3 1135 aa27.51■■□□□ 1.99
LIME1-206ENST00000487026 ZNF598Q86UK7 904 aaKnown RBP27.51■■□□□ 1.99
LIME1-206ENST00000487026 CEP170P1Q96L14 293 aa27.51■■□□□ 1.99
LIME1-206ENST00000487026 NLRP4Q96MN2 994 aa27.51■■□□□ 1.99
LIME1-206ENST00000487026 DACT1Q9NYF0 836 aa27.51■■□□□ 1.99
LIME1-206ENST00000487026 RGL1Q9NZL6 768 aa27.51■■□□□ 1.99
LIME1-206ENST00000487026 TBX3O15119 743 aa27.5■■□□□ 1.99
LIME1-206ENST00000487026 SEC24BO95487 1268 aa27.5■■□□□ 1.99
LIME1-206ENST00000487026 EOMESO95936 686 aa27.5■■□□□ 1.99
LIME1-206ENST00000487026 NEK4P51957 841 aa27.5■■□□□ 1.99
LIME1-206ENST00000487026 EPHA7Q15375 998 aa27.5■■□□□ 1.99
LIME1-206ENST00000487026 LRRC43Q8N309 656 aa27.5■■□□□ 1.99
LIME1-206ENST00000487026 MRPS27Q92552 414 aaKnown RBP27.5■■□□□ 1.99
LIME1-206ENST00000487026 ZNF558Q96NG5 402 aa27.5■■□□□ 1.99
LIME1-206ENST00000487026 NAP1L4Q99733 375 aaKnown RBP27.5■■□□□ 1.99
LIME1-206ENST00000487026 CHST12Q9NRB3 414 aa27.5■■□□□ 1.99
LIME1-206ENST00000487026 BMP2KQ9NSY1 1161 aaPredicted RBP27.5■■□□□ 1.99
LIME1-206ENST00000487026 FSCN2O14926 492 aa27.49■■□□□ 1.99
LIME1-206ENST00000487026 ZBTB39O15060 712 aa27.49■■□□□ 1.99
LIME1-206ENST00000487026 JAK2O60674 1132 aa27.49■■□□□ 1.99
LIME1-206ENST00000487026 SFPQP23246 707 aaKnown RBP eCLIP27.49■■□□□ 1.99
LIME1-206ENST00000487026 PLCB3Q01970 1234 aa27.49■■□□□ 1.99
LIME1-206ENST00000487026 PLPP4Q5VZY2 271 aa27.49■■□□□ 1.99
LIME1-206ENST00000487026 ZNF410Q86VK4 478 aa27.49■■□□□ 1.99
LIME1-206ENST00000487026 NSUN7Q8NE18 718 aaKnown RBP27.49■■□□□ 1.99
LIME1-206ENST00000487026 TNFRSF25Q93038 417 aa27.49■■□□□ 1.99
LIME1-206ENST00000487026 LPPQ93052 612 aa27.49■■□□□ 1.99
LIME1-206ENST00000487026 TMEM143Q96AN5 459 aa27.49■■□□□ 1.99
LIME1-206ENST00000487026 DYDC2Q96IM9 177 aa27.49■■□□□ 1.99
LIME1-206ENST00000487026 LXNQ9BS40 222 aa27.49■■□□□ 1.99
LIME1-206ENST00000487026 PIN4Q9Y237 131 aaKnown RBP27.49■■□□□ 1.99
LIME1-206ENST00000487026 DKC1O60832 514 aaKnown RBP eCLIP27.48■■□□□ 1.99
LIME1-206ENST00000487026 PHKA2P46019 1235 aa27.48■■□□□ 1.99
LIME1-206ENST00000487026 CTTNQ14247 550 aaKnown RBP27.48■■□□□ 1.99
LIME1-206ENST00000487026 TWF2Q6IBS0 349 aaKnown RBP27.48■■□□□ 1.99
LIME1-206ENST00000487026 CATSPER4Q7RTX7 472 aa27.48■■□□□ 1.99
LIME1-206ENST00000487026 VN1R2Q8NFZ6 395 aa27.48■■□□□ 1.99
LIME1-206ENST00000487026 JPH2Q9BR39 696 aaPredicted RBP27.48■■□□□ 1.99
LIME1-206ENST00000487026 INO80BQ9C086 356 aaPredicted RBP27.48■■□□□ 1.99
LIME1-206ENST00000487026 BRMS1Q9HCU9 246 aa27.48■■□□□ 1.99
LIME1-206ENST00000487026 PUF60Q9UHX1 559 aaKnown RBP27.48■■□□□ 1.99
LIME1-206ENST00000487026 BAG4O95429 457 aaKnown RBP27.47■■□□□ 1.99
LIME1-206ENST00000487026 EYA4O95677 639 aa27.47■■□□□ 1.99
LIME1-206ENST00000487026 ALADP13716 330 aa27.47■■□□□ 1.99
LIME1-206ENST00000487026 POLGP54098 1239 aaPredicted RBP27.47■■□□□ 1.99
LIME1-206ENST00000487026 CYP4A11Q02928 519 aa27.47■■□□□ 1.99
LIME1-206ENST00000487026 SPIRE1Q08AE8 756 aa27.47■■□□□ 1.99
LIME1-206ENST00000487026 PRPF31Q8WWY3 499 aaKnown RBP27.47■■□□□ 1.99
LIME1-206ENST00000487026 SLC7A3Q8WY07 619 aa27.47■■□□□ 1.99
LIME1-206ENST00000487026 TCF25Q9BQ70 676 aa27.47■■□□□ 1.99
LIME1-206ENST00000487026 IFT122Q9HBG6 1241 aa27.47■■□□□ 1.99
LIME1-206ENST00000487026 ENTPD7Q9NQZ7 604 aa27.47■■□□□ 1.99
LIME1-206ENST00000487026 SPG21Q9NZD8 308 aa27.47■■□□□ 1.99
LIME1-206ENST00000487026 LZTS1Q9Y250 596 aa27.47■■□□□ 1.99
LIME1-206ENST00000487026 COL4A3BPQ9Y5P4 624 aa27.47■■□□□ 1.99
LIME1-206ENST00000487026 HIDE1A8MVS5 230 aa27.46■■□□□ 1.99
LIME1-206ENST00000487026 BTBD18B2RXH4 712 aa27.46■■□□□ 1.99
LIME1-206ENST00000487026 NT5C1B-RDH14C9J2C7 533 aa27.46■■□□□ 1.99
LIME1-206ENST00000487026 SRGAP2CP0DJJ0 459 aa27.46■■□□□ 1.99
LIME1-206ENST00000487026 YWHABP31946 246 aaKnown RBP27.46■■□□□ 1.99
LIME1-206ENST00000487026 COASYQ13057 564 aa27.46■■□□□ 1.99
LIME1-206ENST00000487026 DUSP6Q16828 381 aa27.46■■□□□ 1.99
LIME1-206ENST00000487026 PDE12Q6L8Q7 609 aaKnown RBP27.46■■□□□ 1.99
LIME1-206ENST00000487026 C4orf19Q8IY42 314 aa27.46■■□□□ 1.99
LIME1-206ENST00000487026 SLFN12Q8IYM2 578 aa27.46■■□□□ 1.99
LIME1-206ENST00000487026 SMRP1Q8NCR6 262 aa27.46■■□□□ 1.99
LIME1-206ENST00000487026 DHX33Q9H6R0 707 aaKnown RBP27.46■■□□□ 1.99
LIME1-206ENST00000487026 MEIS3P2A8K0S8 358 aa27.45■■□□□ 1.98
LIME1-206ENST00000487026 WNT7AO00755 349 aa27.45■■□□□ 1.98
LIME1-206ENST00000487026 DCXO43602 365 aa27.45■■□□□ 1.98
LIME1-206ENST00000487026 KRT17Q04695 432 aa27.45■■□□□ 1.98
LIME1-206ENST00000487026 XKR9Q5GH70 373 aa27.45■■□□□ 1.98
LIME1-206ENST00000487026 TPH2Q8IWU9 490 aa27.45■■□□□ 1.98
LIME1-206ENST00000487026 SLITRK3O94933 977 aa27.44■■□□□ 1.98
LIME1-206ENST00000487026 PPM1AP35813 382 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms