RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 TBX3O15119 743 aa25.15■■□□□ 1.62
SREBF1-214ENST00000486311 DCXO43602 365 aa25.15■■□□□ 1.62
SREBF1-214ENST00000486311 CSDE1O75534 798 aaKnown RBP25.15■■□□□ 1.62
SREBF1-214ENST00000486311 QARSP47897 775 aaKnown RBP25.15■■□□□ 1.62
SREBF1-214ENST00000486311 AK2P54819 239 aa25.15■■□□□ 1.62
SREBF1-214ENST00000486311 CLLU1OSQ5K130 101 aa25.15■■□□□ 1.62
SREBF1-214ENST00000486311 KCNT2Q6UVM3 1135 aa25.15■■□□□ 1.62
SREBF1-214ENST00000486311 PIK3AP1Q6ZUJ8 805 aa25.15■■□□□ 1.62
SREBF1-214ENST00000486311 ZNF410Q86VK4 478 aa25.15■■□□□ 1.62
SREBF1-214ENST00000486311 RNF169Q8NCN4 708 aa25.15■■□□□ 1.62
SREBF1-214ENST00000486311 SMRP1Q8NCR6 262 aa25.15■■□□□ 1.62
SREBF1-214ENST00000486311 MRPS27Q92552 414 aaKnown RBP25.15■■□□□ 1.62
SREBF1-214ENST00000486311 WASF1Q92558 559 aa25.15■■□□□ 1.62
SREBF1-214ENST00000486311 CDCA3Q99618 268 aaPredicted RBP25.15■■□□□ 1.62
SREBF1-214ENST00000486311 FDXACB1Q9BRP7 624 aaPredicted RBP25.15■■□□□ 1.62
SREBF1-214ENST00000486311 ORC3Q9UBD5 711 aaPredicted RBP25.15■■□□□ 1.62
SREBF1-214ENST00000486311 HCN4Q9Y3Q4 1203 aa25.15■■□□□ 1.62
SREBF1-214ENST00000486311 GTF3C3Q9Y5Q9 886 aa25.15■■□□□ 1.62
SREBF1-214ENST00000486311 FSD2A1L4K1 749 aa25.14■■□□□ 1.62
SREBF1-214ENST00000486311 CCNT1O60563 726 aaKnown RBP25.14■■□□□ 1.62
SREBF1-214ENST00000486311 DKC1O60832 514 aaKnown RBP eCLIP25.14■■□□□ 1.62
SREBF1-214ENST00000486311 DTNBO60941 627 aa25.14■■□□□ 1.62
SREBF1-214ENST00000486311 ATF7P17544 494 aaPredicted RBP25.14■■□□□ 1.62
SREBF1-214ENST00000486311 PPM1AP35813 382 aa25.14■■□□□ 1.62
SREBF1-214ENST00000486311 PLA2G4FQ68DD2 849 aa25.14■■□□□ 1.62
SREBF1-214ENST00000486311 HAS1Q92839 578 aa25.14■■□□□ 1.62
SREBF1-214ENST00000486311 ZNF558Q96NG5 402 aa25.14■■□□□ 1.62
SREBF1-214ENST00000486311 TRAIPQ9BWF2 469 aa25.14■■□□□ 1.62
SREBF1-214ENST00000486311 INO80BQ9C086 356 aaPredicted RBP25.14■■□□□ 1.62
SREBF1-214ENST00000486311 CYP26B1Q9NR63 512 aa25.14■■□□□ 1.62
SREBF1-214ENST00000486311 PUF60Q9UHX1 559 aaKnown RBP25.14■■□□□ 1.62
SREBF1-214ENST00000486311 BARX2Q9UMQ3 279 aaPredicted RBP25.14■■□□□ 1.62
SREBF1-214ENST00000486311 FNDC1Q4ZHG4 1894 aaPredicted RBP25.14■■□□□ 1.61
SREBF1-214ENST00000486311 PRR33A8MZF0 331 aa25.13■■□□□ 1.61
SREBF1-214ENST00000486311 PER2O15055 1255 aa25.13■■□□□ 1.61
SREBF1-214ENST00000486311 P4HBP07237 508 aaKnown RBP25.13■■□□□ 1.61
SREBF1-214ENST00000486311 SFPQP23246 707 aaKnown RBP eCLIP25.13■■□□□ 1.61
SREBF1-214ENST00000486311 DUSP6Q16828 381 aa25.13■■□□□ 1.61
SREBF1-214ENST00000486311 EARS2Q5JPH6 523 aaKnown RBP25.13■■□□□ 1.61
SREBF1-214ENST00000486311 RHPN2Q8IUC4 686 aa25.13■■□□□ 1.61
SREBF1-214ENST00000486311 PPME1Q9Y570 386 aa25.13■■□□□ 1.61
SREBF1-214ENST00000486311 FDPSP14324 419 aaKnown RBP25.12■■□□□ 1.61
SREBF1-214ENST00000486311 VN1R2Q8NFZ6 395 aa25.12■■□□□ 1.61
SREBF1-214ENST00000486311 HELQQ8TDG4 1101 aa25.12■■□□□ 1.61
SREBF1-214ENST00000486311 WRAP73Q9P2S5 460 aaPredicted RBP25.12■■□□□ 1.61
SREBF1-214ENST00000486311 PBX3P40426 434 aa25.11■■□□□ 1.61
SREBF1-214ENST00000486311 PHKA2P46019 1235 aa25.11■■□□□ 1.61
SREBF1-214ENST00000486311 NPEPPSP55786 919 aa25.11■■□□□ 1.61
SREBF1-214ENST00000486311 EPHA7Q15375 998 aa25.11■■□□□ 1.61
SREBF1-214ENST00000486311 POTEDQ86YR6 584 aa25.11■■□□□ 1.61
SREBF1-214ENST00000486311 KSR1Q8IVT5 923 aa25.11■■□□□ 1.61
SREBF1-214ENST00000486311 EXOC8Q8IYI6 725 aa25.11■■□□□ 1.61
SREBF1-214ENST00000486311 SLC7A3Q8WY07 619 aa25.11■■□□□ 1.61
SREBF1-214ENST00000486311 RSPH1Q8WYR4 309 aa25.11■■□□□ 1.61
SREBF1-214ENST00000486311 TCF25Q9BQ70 676 aa25.11■■□□□ 1.61
SREBF1-214ENST00000486311 MRPL9Q9BYD2 267 aaKnown RBP25.11■■□□□ 1.61
SREBF1-214ENST00000486311 NGRNQ9NPE2 291 aaKnown RBP25.11■■□□□ 1.61
SREBF1-214ENST00000486311 SPG21Q9NZD8 308 aa25.11■■□□□ 1.61
SREBF1-214ENST00000486311 C5orf42Q9H799 3197 aa25.11■■□□□ 1.61
SREBF1-214ENST00000486311 MARCH6O60337 910 aa25.1■■□□□ 1.61
SREBF1-214ENST00000486311 KRT2P35908 639 aa25.1■■□□□ 1.61
SREBF1-214ENST00000486311 RBM10P98175 930 aaKnown RBP25.1■■□□□ 1.61
SREBF1-214ENST00000486311 KRT17Q04695 432 aa25.1■■□□□ 1.61
SREBF1-214ENST00000486311 ME3Q16798 604 aa25.1■■□□□ 1.61
SREBF1-214ENST00000486311 PLPP4Q5VZY2 271 aa25.1■■□□□ 1.61
SREBF1-214ENST00000486311 C4orf19Q8IY42 314 aa25.1■■□□□ 1.61
SREBF1-214ENST00000486311 NECAB1Q8N987 351 aa25.1■■□□□ 1.61
SREBF1-214ENST00000486311 ZNF579Q8NAF0 562 aaKnown RBP25.1■■□□□ 1.61
SREBF1-214ENST00000486311 TNFRSF25Q93038 417 aa25.1■■□□□ 1.61
SREBF1-214ENST00000486311 GTF3C6Q969F1 213 aa25.1■■□□□ 1.61
SREBF1-214ENST00000486311 CEP170P1Q96L14 293 aa25.1■■□□□ 1.61
SREBF1-214ENST00000486311 NLRP4Q96MN2 994 aa25.1■■□□□ 1.61
SREBF1-214ENST00000486311 DHX33Q9H6R0 707 aaKnown RBP25.1■■□□□ 1.61
SREBF1-214ENST00000486311 ENTPD7Q9NQZ7 604 aa25.1■■□□□ 1.61
SREBF1-214ENST00000486311 WDR81Q562E7 1941 aa25.1■■□□□ 1.61
SREBF1-214ENST00000486311 PLXNA4Q9HCM2 1894 aa25.09■■□□□ 1.61
SREBF1-214ENST00000486311 FAM205CA6NFA0 338 aa25.09■■□□□ 1.61
SREBF1-214ENST00000486311 SKIP12755 728 aa25.09■■□□□ 1.61
SREBF1-214ENST00000486311 RFC5P40937 340 aa25.09■■□□□ 1.61
SREBF1-214ENST00000486311 SPIRE1Q08AE8 756 aa25.09■■□□□ 1.61
SREBF1-214ENST00000486311 NR5A1Q13285 461 aa25.09■■□□□ 1.61
SREBF1-214ENST00000486311 KCNC3Q14003 757 aa25.09■■□□□ 1.61
SREBF1-214ENST00000486311 TWF2Q6IBS0 349 aaKnown RBP25.09■■□□□ 1.61
SREBF1-214ENST00000486311 TMEM184AQ6ZMB5 413 aa25.09■■□□□ 1.61
SREBF1-214ENST00000486311 CATSPER4Q7RTX7 472 aa25.09■■□□□ 1.61
SREBF1-214ENST00000486311 SLC39A11Q8N1S5 342 aa25.09■■□□□ 1.61
SREBF1-214ENST00000486311 LXNQ9BS40 222 aa25.09■■□□□ 1.61
SREBF1-214ENST00000486311 IFT122Q9HBG6 1241 aa25.09■■□□□ 1.61
SREBF1-214ENST00000486311 BRMS1Q9HCU9 246 aa25.09■■□□□ 1.61
SREBF1-214ENST00000486311 PIN4Q9Y237 131 aaKnown RBP25.09■■□□□ 1.61
SREBF1-214ENST00000486311 USP15Q9Y4E8 981 aaPredicted RBP25.09■■□□□ 1.61
SREBF1-214ENST00000486311 COL4A3BPQ9Y5P4 624 aa25.09■■□□□ 1.61
SREBF1-214ENST00000486311 HIDE1A8MVS5 230 aa25.08■■□□□ 1.61
SREBF1-214ENST00000486311 LARGE1O95461 756 aa25.08■■□□□ 1.61
SREBF1-214ENST00000486311 YWHABP31946 246 aaKnown RBP25.08■■□□□ 1.61
SREBF1-214ENST00000486311 POLGP54098 1239 aaPredicted RBP25.08■■□□□ 1.61
SREBF1-214ENST00000486311 RNF135Q8IUD6 432 aa25.08■■□□□ 1.61
SREBF1-214ENST00000486311 SLFN12Q8IYM2 578 aa25.08■■□□□ 1.61
SREBF1-214ENST00000486311 FAM105AQ9NUU6 356 aa25.08■■□□□ 1.61
SREBF1-214ENST00000486311 ZNF623O75123 536 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms