RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ECHDC2Q86YB7 292 aa19.69■□□□□ 0.74
COL6A1-204ENST00000486023 KLHL23Q8NBE8 558 aa19.69■□□□□ 0.74
COL6A1-204ENST00000486023 RNF149Q8NC42 400 aa19.69■□□□□ 0.74
COL6A1-204ENST00000486023 TCP11Q8WWU5 503 aa19.69■□□□□ 0.74
COL6A1-204ENST00000486023 IGFLR1Q9H665 355 aa19.69■□□□□ 0.74
COL6A1-204ENST00000486023 PLAGL2Q9UPG8 496 aa19.69■□□□□ 0.74
COL6A1-204ENST00000486023 CUL9Q8IWT3 2517 aa19.69■□□□□ 0.74
COL6A1-204ENST00000486023 XIRP2A4UGR9 3374 aa19.69■□□□□ 0.74
COL6A1-204ENST00000486023 LOXHD1Q8IVV2 1947 aa19.68■□□□□ 0.74
COL6A1-204ENST00000486023 TTC3P53804 2025 aa19.68■□□□□ 0.74
COL6A1-204ENST00000486023 C5orf67F2Z3F1 127 aa19.68■□□□□ 0.74
COL6A1-204ENST00000486023 TIGD5Q53EQ6 642 aa19.68■□□□□ 0.74
COL6A1-204ENST00000486023 NEK9Q8TD19 979 aa19.68■□□□□ 0.74
COL6A1-204ENST00000486023 ADAMTS19Q8TE59 1207 aa19.68■□□□□ 0.74
COL6A1-204ENST00000486023 PLVAPQ9BX97 442 aa19.68■□□□□ 0.74
COL6A1-204ENST00000486023 NSUN3Q9H649 340 aaKnown RBP19.68■□□□□ 0.74
COL6A1-204ENST00000486023 ELAC1Q9H777 363 aaKnown RBP19.68■□□□□ 0.74
COL6A1-204ENST00000486023 DACT1Q9NYF0 836 aa19.68■□□□□ 0.74
COL6A1-204ENST00000486023 SMC3Q9UQE7 1217 aa19.68■□□□□ 0.74
COL6A1-204ENST00000486023 PPME1Q9Y570 386 aa19.68■□□□□ 0.74
COL6A1-204ENST00000486023 PCDHB12Q9Y5F1 795 aa19.68■□□□□ 0.74
COL6A1-204ENST00000486023 COL4A4P53420 1690 aaPredicted RBP19.68■□□□□ 0.74
COL6A1-204ENST00000486023 MED24O75448 989 aa19.67■□□□□ 0.74
COL6A1-204ENST00000486023 KCNA5P22460 613 aa19.67■□□□□ 0.74
COL6A1-204ENST00000486023 FAM43BQ6ZT52 329 aaPredicted RBP19.67■□□□□ 0.74
COL6A1-204ENST00000486023 CATSPER3Q86XQ3 398 aa19.67■□□□□ 0.74
COL6A1-204ENST00000486023 ERMNQ8TAM6 284 aa19.67■□□□□ 0.74
COL6A1-204ENST00000486023 HELQQ8TDG4 1101 aa19.67■□□□□ 0.74
COL6A1-204ENST00000486023 MICAL1Q8TDZ2 1067 aa19.67■□□□□ 0.74
COL6A1-204ENST00000486023 LPPQ93052 612 aa19.67■□□□□ 0.74
COL6A1-204ENST00000486023 IFT122Q9HBG6 1241 aa19.67■□□□□ 0.74
COL6A1-204ENST00000486023 AAASQ9NRG9 546 aa19.67■□□□□ 0.74
COL6A1-204ENST00000486023 ANKEF1Q9NU02 776 aa19.67■□□□□ 0.74
COL6A1-204ENST00000486023 PCDHB6Q9Y5E3 794 aa19.67■□□□□ 0.74
COL6A1-204ENST00000486023 SPTBN5Q9NRC6 3674 aaKnown RBP19.66■□□□□ 0.74
COL6A1-204ENST00000486023 A0A0U1RQF3 1178 aa19.66■□□□□ 0.74
COL6A1-204ENST00000486023 HOXA2O43364 376 aa19.66■□□□□ 0.74
COL6A1-204ENST00000486023 USO1O60763 962 aaKnown RBP19.66■□□□□ 0.74
COL6A1-204ENST00000486023 ITGB1P05556 798 aa19.66■□□□□ 0.74
COL6A1-204ENST00000486023 U2AF2P26368 475 aaKnown RBP eCLIP19.66■□□□□ 0.74
COL6A1-204ENST00000486023 MCM2P49736 904 aa19.66■□□□□ 0.74
COL6A1-204ENST00000486023 FERMT3Q86UX7 667 aa19.66■□□□□ 0.74
COL6A1-204ENST00000486023 THNSL1Q8IYQ7 743 aa19.66■□□□□ 0.74
COL6A1-204ENST00000486023 SPPL3Q8TCT6 385 aa19.66■□□□□ 0.74
COL6A1-204ENST00000486023 NECAB3Q96P71 396 aaPredicted RBP19.66■□□□□ 0.74
COL6A1-204ENST00000486023 CASD1Q96PB1 797 aa19.66■□□□□ 0.74
COL6A1-204ENST00000486023 TMEM117Q9H0C3 514 aa19.66■□□□□ 0.74
COL6A1-204ENST00000486023 UBE2ZQ9H832 354 aaPredicted RBP19.66■□□□□ 0.74
COL6A1-204ENST00000486023 MINDY3Q9H8M7 445 aa19.66■□□□□ 0.74
COL6A1-204ENST00000486023 XPNPEP1Q9NQW7 623 aa19.66■□□□□ 0.74
COL6A1-204ENST00000486023 CHST12Q9NRB3 414 aa19.66■□□□□ 0.74
COL6A1-204ENST00000486023 ASAP2O43150 1006 aa19.65■□□□□ 0.74
COL6A1-204ENST00000486023 DGAT1O75907 488 aa19.65■□□□□ 0.74
COL6A1-204ENST00000486023 LYPLA2O95372 231 aa19.65■□□□□ 0.74
COL6A1-204ENST00000486023 SPATA31C1P0DKV0 1188 aa19.65■□□□□ 0.74
COL6A1-204ENST00000486023 DNAJB1P25685 340 aa19.65■□□□□ 0.74
COL6A1-204ENST00000486023 TRAPPC10P48553 1259 aa19.65■□□□□ 0.74
COL6A1-204ENST00000486023 RARRES1P49788 294 aa19.65■□□□□ 0.74
COL6A1-204ENST00000486023 TOB1P50616 345 aaPredicted RBP19.65■□□□□ 0.74
COL6A1-204ENST00000486023 PTGDRQ13258 359 aa19.65■□□□□ 0.74
COL6A1-204ENST00000486023 POTEGQ6S5H5 508 aa19.65■□□□□ 0.74
COL6A1-204ENST00000486023 POF1BQ8WVV4 589 aa19.65■□□□□ 0.74
COL6A1-204ENST00000486023 UHRF1Q96T88 793 aaPredicted RBP19.65■□□□□ 0.74
COL6A1-204ENST00000486023 LMAN2LQ9H0V9 348 aa19.65■□□□□ 0.74
COL6A1-204ENST00000486023 CLDND1Q9NY35 253 aa19.65■□□□□ 0.74
COL6A1-204ENST00000486023 H3BQ06 376 aaPredicted RBP19.64■□□□□ 0.73
COL6A1-204ENST00000486023 GAS2O43903 313 aaKnown RBP19.64■□□□□ 0.73
COL6A1-204ENST00000486023 BMP1P13497 986 aa19.64■□□□□ 0.73
COL6A1-204ENST00000486023 CCT6AP40227 531 aaKnown RBP19.64■□□□□ 0.73
COL6A1-204ENST00000486023 PBX3P40426 434 aa19.64■□□□□ 0.73
COL6A1-204ENST00000486023 PHKA2P46019 1235 aa19.64■□□□□ 0.73
COL6A1-204ENST00000486023 ORC2Q13416 577 aaPredicted RBP19.64■□□□□ 0.73
COL6A1-204ENST00000486023 TFDP1Q14186 410 aa19.64■□□□□ 0.73
COL6A1-204ENST00000486023 CLLU1OSQ5K130 101 aa19.64■□□□□ 0.73
COL6A1-204ENST00000486023 LRRC55Q6ZSA7 311 aa19.64■□□□□ 0.73
COL6A1-204ENST00000486023 SRGAP1Q7Z6B7 1085 aa19.64■□□□□ 0.73
COL6A1-204ENST00000486023 RBM23Q86U06 439 aaKnown RBP19.64■□□□□ 0.73
COL6A1-204ENST00000486023 COLGALT1Q8NBJ5 622 aa19.64■□□□□ 0.73
COL6A1-204ENST00000486023 ASAP3Q8TDY4 903 aa19.64■□□□□ 0.73
COL6A1-204ENST00000486023 P2RX5Q93086 422 aa19.64■□□□□ 0.73
COL6A1-204ENST00000486023 NACC1Q96RE7 527 aa19.64■□□□□ 0.73
COL6A1-204ENST00000486023 TUFT1Q9NNX1 390 aa19.64■□□□□ 0.73
COL6A1-204ENST00000486023 RNF19AQ9NV58 838 aa19.64■□□□□ 0.73
COL6A1-204ENST00000486023 LRWD1Q9UFC0 647 aa19.64■□□□□ 0.73
COL6A1-204ENST00000486023 INPP5FQ9Y2H2 1132 aa19.64■□□□□ 0.73
COL6A1-204ENST00000486023 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.64■□□□□ 0.73
COL6A1-204ENST00000486023 WDR81Q562E7 1941 aa19.63■□□□□ 0.73
COL6A1-204ENST00000486023 INO80B-WBP1J3KQ70 363 aa19.63■□□□□ 0.73
COL6A1-204ENST00000486023 FGF18O76093 207 aa19.63■□□□□ 0.73
COL6A1-204ENST00000486023 ERLIN2O94905 339 aa19.63■□□□□ 0.73
COL6A1-204ENST00000486023 EOMESO95936 686 aa19.63■□□□□ 0.73
COL6A1-204ENST00000486023 GTF2F1P35269 517 aaKnown RBP eCLIP19.63■□□□□ 0.73
COL6A1-204ENST00000486023 IRS1P35568 1242 aa19.63■□□□□ 0.73
COL6A1-204ENST00000486023 MXD4Q14582 209 aaPredicted RBP19.63■□□□□ 0.73
COL6A1-204ENST00000486023 ZRSR1Q15695 479 aaKnown RBP19.63■□□□□ 0.73
COL6A1-204ENST00000486023 NAALADL2Q58DX5 795 aa19.63■□□□□ 0.73
COL6A1-204ENST00000486023 LARP1BQ659C4 914 aaKnown RBP19.63■□□□□ 0.73
COL6A1-204ENST00000486023 C4orf32Q8N8J7 132 aa19.63■□□□□ 0.73
COL6A1-204ENST00000486023 POLR3CQ9BUI4 534 aaPredicted RBP19.63■□□□□ 0.73
COL6A1-204ENST00000486023 POLR3FQ9H1D9 316 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms