RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 VAV3Q9UKW4 847 aa18.96■□□□□ 0.63
VIM-205ENST00000485947 ST3GAL5Q9UNP4 418 aa18.96■□□□□ 0.63
VIM-205ENST00000485947 PIEZO1Q92508 2521 aa18.96■□□□□ 0.63
VIM-205ENST00000485947 CHD7Q9P2D1 2997 aa18.95■□□□□ 0.62
VIM-205ENST00000485947 IGKV6-21A0A0C4DH24 114 aa18.95■□□□□ 0.62
VIM-205ENST00000485947 VWA3AA6NCI4 1184 aa18.95■□□□□ 0.62
VIM-205ENST00000485947 LIG1P18858 919 aa18.95■□□□□ 0.62
VIM-205ENST00000485947 SARSP49591 514 aaKnown RBP18.95■□□□□ 0.62
VIM-205ENST00000485947 FXR2P51116 673 aaKnown RBP eCLIP18.95■□□□□ 0.62
VIM-205ENST00000485947 NFX1Q12986 1120 aaKnown RBP18.95■□□□□ 0.62
VIM-205ENST00000485947 EPHA7Q15375 998 aa18.95■□□□□ 0.62
VIM-205ENST00000485947 UGCGQ16739 394 aa18.95■□□□□ 0.62
VIM-205ENST00000485947 NAALADL2Q58DX5 795 aa18.95■□□□□ 0.62
VIM-205ENST00000485947 LINC01599Q8WXQ3 324 aa18.95■□□□□ 0.62
VIM-205ENST00000485947 HAS1Q92839 578 aa18.95■□□□□ 0.62
VIM-205ENST00000485947 C17orf80Q9BSJ5 609 aa18.95■□□□□ 0.62
VIM-205ENST00000485947 RAB34Q9BZG1 259 aa18.95■□□□□ 0.62
VIM-205ENST00000485947 LMAN2LQ9H0V9 348 aa18.95■□□□□ 0.62
VIM-205ENST00000485947 GOLPH3LQ9H4A5 285 aa18.95■□□□□ 0.62
VIM-205ENST00000485947 ELAC1Q9H777 363 aaKnown RBP18.95■□□□□ 0.62
VIM-205ENST00000485947 AKT3Q9Y243 479 aa18.95■□□□□ 0.62
VIM-205ENST00000485947 GINS2Q9Y248 185 aa18.95■□□□□ 0.62
VIM-205ENST00000485947 HPSEQ9Y251 543 aa18.95■□□□□ 0.62
VIM-205ENST00000485947 NOC2LQ9Y3T9 749 aaKnown RBP18.95■□□□□ 0.62
VIM-205ENST00000485947 SIP14410 1827 aa18.95■□□□□ 0.62
VIM-205ENST00000485947 PRRC2BQ5JSZ5 2229 aaKnown RBP18.94■□□□□ 0.62
VIM-205ENST00000485947 DENND3A2RUS2 1198 aa18.94■□□□□ 0.62
VIM-205ENST00000485947 STBD1O95210 358 aa18.94■□□□□ 0.62
VIM-205ENST00000485947 PFKFB1P16118 471 aa18.94■□□□□ 0.62
VIM-205ENST00000485947 EIF4BP23588 611 aaKnown RBP18.94■□□□□ 0.62
VIM-205ENST00000485947 BMPR1AP36894 532 aa18.94■□□□□ 0.62
VIM-205ENST00000485947 NLRP11P59045 1033 aaKnown RBP18.94■□□□□ 0.62
VIM-205ENST00000485947 GRIN1Q05586 938 aa18.94■□□□□ 0.62
VIM-205ENST00000485947 BTG3Q14201 252 aaPredicted RBP18.94■□□□□ 0.62
VIM-205ENST00000485947 KIZQ2M2Z5 673 aa18.94■□□□□ 0.62
VIM-205ENST00000485947 TPRNQ4KMQ1 711 aa18.94■□□□□ 0.62
VIM-205ENST00000485947 C4orf19Q8IY42 314 aa18.94■□□□□ 0.62
VIM-205ENST00000485947 ENGASEQ8NFI3 743 aa18.94■□□□□ 0.62
VIM-205ENST00000485947 ADAMTS19Q8TE59 1207 aa18.94■□□□□ 0.62
VIM-205ENST00000485947 GDPD5Q8WTR4 605 aa18.94■□□□□ 0.62
VIM-205ENST00000485947 GJA10Q969M2 543 aa18.94■□□□□ 0.62
VIM-205ENST00000485947 MRPL38Q96DV4 380 aaKnown RBP18.94■□□□□ 0.62
VIM-205ENST00000485947 C11orf84Q9BUA3 381 aaPredicted RBP18.94■□□□□ 0.62
VIM-205ENST00000485947 ADAMTS10Q9H324 1103 aa18.94■□□□□ 0.62
VIM-205ENST00000485947 TMX1Q9H3N1 280 aa18.94■□□□□ 0.62
VIM-205ENST00000485947 SEPT9Q9UHD8 586 aaPredicted RBP18.94■□□□□ 0.62
VIM-205ENST00000485947 MTUS1Q9ULD2 1270 aa18.94■□□□□ 0.62
VIM-205ENST00000485947 LRFN2Q9ULH4 789 aa18.94■□□□□ 0.62
VIM-205ENST00000485947 PCDHB7Q9Y5E2 793 aa18.94■□□□□ 0.62
VIM-205ENST00000485947 GAS2O43903 313 aaKnown RBP18.93■□□□□ 0.62
VIM-205ENST00000485947 MAFO75444 373 aaPredicted RBP18.93■□□□□ 0.62
VIM-205ENST00000485947 VTNP04004 478 aa18.93■□□□□ 0.62
VIM-205ENST00000485947 TXLNAP40222 546 aa18.93■□□□□ 0.62
VIM-205ENST00000485947 CLCN3P51790 818 aa18.93■□□□□ 0.62
VIM-205ENST00000485947 FAM189BP81408 668 aa18.93■□□□□ 0.62
VIM-205ENST00000485947 PDIA5Q14554 519 aa18.93■□□□□ 0.62
VIM-205ENST00000485947 TIGD5Q53EQ6 642 aa18.93■□□□□ 0.62
VIM-205ENST00000485947 CAVIN1Q6NZI2 390 aaKnown RBP18.93■□□□□ 0.62
VIM-205ENST00000485947 OTUD6AQ7L8S5 288 aa18.93■□□□□ 0.62
VIM-205ENST00000485947 TRMT1LQ7Z2T5 733 aaKnown RBP18.93■□□□□ 0.62
VIM-205ENST00000485947 SPRED2Q7Z698 418 aa18.93■□□□□ 0.62
VIM-205ENST00000485947 ZNF410Q86VK4 478 aa18.93■□□□□ 0.62
VIM-205ENST00000485947 MICALL1Q8N3F8 863 aa18.93■□□□□ 0.62
VIM-205ENST00000485947 NEK9Q8TD19 979 aa18.93■□□□□ 0.62
VIM-205ENST00000485947 TMEM40Q8WWA1 233 aa18.93■□□□□ 0.62
VIM-205ENST00000485947 RSPH1Q8WYR4 309 aa18.93■□□□□ 0.62
VIM-205ENST00000485947 P2RX5Q93086 422 aa18.93■□□□□ 0.62
VIM-205ENST00000485947 CEP89Q96ST8 783 aa18.93■□□□□ 0.62
VIM-205ENST00000485947 OSMRQ99650 979 aa18.93■□□□□ 0.62
VIM-205ENST00000485947 PYM1Q9BRP8 204 aaKnown RBP18.93■□□□□ 0.62
VIM-205ENST00000485947 INO80BQ9C086 356 aaPredicted RBP18.93■□□□□ 0.62
VIM-205ENST00000485947 CDHR5Q9HBB8 845 aa18.93■□□□□ 0.62
VIM-205ENST00000485947 A0A1B0GVL5 298 aa18.92■□□□□ 0.62
VIM-205ENST00000485947 NR1I2O75469 434 aa18.92■□□□□ 0.62
VIM-205ENST00000485947 TXKP42681 527 aa18.92■□□□□ 0.62
VIM-205ENST00000485947 GPC3P51654 580 aa18.92■□□□□ 0.62
VIM-205ENST00000485947 NDUFA8P51970 172 aa18.92■□□□□ 0.62
VIM-205ENST00000485947 GPM6BQ13491 265 aa18.92■□□□□ 0.62
VIM-205ENST00000485947 SKIV2LQ15477 1246 aaKnown RBP18.92■□□□□ 0.62
VIM-205ENST00000485947 IL17AQ16552 155 aa18.92■□□□□ 0.62
VIM-205ENST00000485947 CCDC183Q5T5S1 534 aa18.92■□□□□ 0.62
VIM-205ENST00000485947 ANO5Q75V66 913 aa18.92■□□□□ 0.62
VIM-205ENST00000485947 FAM228AQ86W67 206 aa18.92■□□□□ 0.62
VIM-205ENST00000485947 FMR1NBQ8N0W7 255 aaPredicted RBP18.92■□□□□ 0.62
VIM-205ENST00000485947 IGSF22Q8N9C0 903 aa18.92■□□□□ 0.62
VIM-205ENST00000485947 HLA-CQ95604 372 aa18.92■□□□□ 0.62
VIM-205ENST00000485947 ADAM2Q99965 735 aa18.92■□□□□ 0.62
VIM-205ENST00000485947 ZSWIM4Q9H7M6 989 aa18.92■□□□□ 0.62
VIM-205ENST00000485947 TMEM161AQ9NX61 479 aa18.92■□□□□ 0.62
VIM-205ENST00000485947 DACT1Q9NYF0 836 aa18.92■□□□□ 0.62
VIM-205ENST00000485947 PCDHA12Q9UN75 941 aa18.92■□□□□ 0.62
VIM-205ENST00000485947 C9IYK1 514 aa18.91■□□□□ 0.62
VIM-205ENST00000485947 EML1O00423 815 aa18.91■□□□□ 0.62
VIM-205ENST00000485947 HOXA2O43364 376 aa18.91■□□□□ 0.62
VIM-205ENST00000485947 NCK2O43639 380 aa18.91■□□□□ 0.62
VIM-205ENST00000485947 KINO60870 393 aaKnown RBP18.91■□□□□ 0.62
VIM-205ENST00000485947 LINC00271P0C7V0 271 aa18.91■□□□□ 0.62
VIM-205ENST00000485947 DARSP14868 501 aaKnown RBP18.91■□□□□ 0.62
VIM-205ENST00000485947 ZSCAN20P17040 1043 aaPredicted RBP18.91■□□□□ 0.62
VIM-205ENST00000485947 RFC5P40937 340 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms