RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 H3BNC9 293 aa20.51■□□□□ 0.87
COL1A1-206ENST00000485870 USO1O60763 962 aaKnown RBP20.51■□□□□ 0.87
COL1A1-206ENST00000485870 DGAT1O75907 488 aa20.51■□□□□ 0.87
COL1A1-206ENST00000485870 FGFR1P11362 822 aa20.51■□□□□ 0.87
COL1A1-206ENST00000485870 RPA1P27694 616 aa20.51■□□□□ 0.87
COL1A1-206ENST00000485870 BMPR1AP36894 532 aa20.51■□□□□ 0.87
COL1A1-206ENST00000485870 FAM189BP81408 668 aa20.51■□□□□ 0.87
COL1A1-206ENST00000485870 RILPL1Q5EBL4 403 aa20.51■□□□□ 0.87
COL1A1-206ENST00000485870 FAM102BQ5T8I3 360 aa20.51■□□□□ 0.87
COL1A1-206ENST00000485870 CATSPER4Q7RTX7 472 aa20.51■□□□□ 0.87
COL1A1-206ENST00000485870 FERMT3Q86UX7 667 aa20.51■□□□□ 0.87
COL1A1-206ENST00000485870 RNF169Q8NCN4 708 aa20.51■□□□□ 0.87
COL1A1-206ENST00000485870 IFT122Q9HBG6 1241 aa20.51■□□□□ 0.87
COL1A1-206ENST00000485870 LMCD1Q9NZU5 365 aa20.51■□□□□ 0.87
COL1A1-206ENST00000485870 LRWD1Q9UFC0 647 aa20.51■□□□□ 0.87
COL1A1-206ENST00000485870 RWDD3Q9Y3V2 267 aa20.51■□□□□ 0.87
COL1A1-206ENST00000485870 FNDC1Q4ZHG4 1894 aaPredicted RBP20.51■□□□□ 0.87
COL1A1-206ENST00000485870 KIAA1671Q9BY89 1806 aa20.5■□□□□ 0.87
COL1A1-206ENST00000485870 HAUS3Q68CZ6 603 aa20.5■□□□□ 0.87
COL1A1-206ENST00000485870 ECHDC2Q86YB7 292 aa20.5■□□□□ 0.87
COL1A1-206ENST00000485870 RNF149Q8NC42 400 aa20.5■□□□□ 0.87
COL1A1-206ENST00000485870 NACC1Q96RE7 527 aa20.5■□□□□ 0.87
COL1A1-206ENST00000485870 ELAC1Q9H777 363 aaKnown RBP20.5■□□□□ 0.87
COL1A1-206ENST00000485870 PIN4Q9Y237 131 aaKnown RBP20.5■□□□□ 0.87
COL1A1-206ENST00000485870 MYO7AQ13402 2215 aa20.5■□□□□ 0.87
COL1A1-206ENST00000485870 SPTBN5Q9NRC6 3674 aaKnown RBP20.5■□□□□ 0.87
COL1A1-206ENST00000485870 LAD1O00515 517 aa20.49■□□□□ 0.87
COL1A1-206ENST00000485870 ASAP2O43150 1006 aa20.49■□□□□ 0.87
COL1A1-206ENST00000485870 XRCC6P12956 609 aaKnown RBP eCLIP20.49■□□□□ 0.87
COL1A1-206ENST00000485870 CCT6AP40227 531 aaKnown RBP20.49■□□□□ 0.87
COL1A1-206ENST00000485870 ASAP3Q8TDY4 903 aa20.49■□□□□ 0.87
COL1A1-206ENST00000485870 C11orf84Q9BUA3 381 aaPredicted RBP20.49■□□□□ 0.87
COL1A1-206ENST00000485870 RAB34Q9BZG1 259 aa20.49■□□□□ 0.87
COL1A1-206ENST00000485870 MINDY3Q9H8M7 445 aa20.49■□□□□ 0.87
COL1A1-206ENST00000485870 CHST12Q9NRB3 414 aa20.49■□□□□ 0.87
COL1A1-206ENST00000485870 DACT1Q9NYF0 836 aa20.49■□□□□ 0.87
COL1A1-206ENST00000485870 THEGQ9P2T0 379 aa20.49■□□□□ 0.87
COL1A1-206ENST00000485870 DBR1Q9UK59 544 aaKnown RBP20.49■□□□□ 0.87
COL1A1-206ENST00000485870 VPS37CA5D8V6 355 aaPredicted RBP20.48■□□□□ 0.87
COL1A1-206ENST00000485870 C5orf67F2Z3F1 127 aa20.48■□□□□ 0.87
COL1A1-206ENST00000485870 RB1P06400 928 aa20.48■□□□□ 0.87
COL1A1-206ENST00000485870 PDIA5Q14554 519 aa20.48■□□□□ 0.87
COL1A1-206ENST00000485870 MXD4Q14582 209 aaPredicted RBP20.48■□□□□ 0.87
COL1A1-206ENST00000485870 ECM1Q16610 540 aa20.48■□□□□ 0.87
COL1A1-206ENST00000485870 PTPROQ16827 1216 aa20.48■□□□□ 0.87
COL1A1-206ENST00000485870 SPOUT1Q5T280 376 aaKnown RBP20.48■□□□□ 0.87
COL1A1-206ENST00000485870 TWF2Q6IBS0 349 aaKnown RBP20.48■□□□□ 0.87
COL1A1-206ENST00000485870 DTHD1Q6ZMT9 781 aa20.48■□□□□ 0.87
COL1A1-206ENST00000485870 MAEAQ7L5Y9 396 aa20.48■□□□□ 0.87
COL1A1-206ENST00000485870 SRGAP1Q7Z6B7 1085 aa20.48■□□□□ 0.87
COL1A1-206ENST00000485870 IGSF22Q8N9C0 903 aa20.48■□□□□ 0.87
COL1A1-206ENST00000485870 SNX29Q8TEQ0 813 aa20.48■□□□□ 0.87
COL1A1-206ENST00000485870 MRPL38Q96DV4 380 aaKnown RBP20.48■□□□□ 0.87
COL1A1-206ENST00000485870 POLR3FQ9H1D9 316 aaPredicted RBP20.48■□□□□ 0.87
COL1A1-206ENST00000485870 BRWD1Q9NSI6 2320 aa20.47■□□□□ 0.87
COL1A1-206ENST00000485870 A0A0U1RQF3 1178 aa20.47■□□□□ 0.87
COL1A1-206ENST00000485870 ARHGEF35A5YM69 484 aa20.47■□□□□ 0.87
COL1A1-206ENST00000485870 PP2D1A8MPX8 630 aa20.47■□□□□ 0.87
COL1A1-206ENST00000485870 CSPG5O95196 566 aa20.47■□□□□ 0.87
COL1A1-206ENST00000485870 PRPHP41219 470 aa20.47■□□□□ 0.87
COL1A1-206ENST00000485870 PHKA2P46019 1235 aa20.47■□□□□ 0.87
COL1A1-206ENST00000485870 ATP2C1P98194 919 aaPredicted RBP20.47■□□□□ 0.87
COL1A1-206ENST00000485870 CAPSQ13938 189 aa20.47■□□□□ 0.87
COL1A1-206ENST00000485870 TFDP1Q14186 410 aa20.47■□□□□ 0.87
COL1A1-206ENST00000485870 IL17AQ16552 155 aa20.47■□□□□ 0.87
COL1A1-206ENST00000485870 GPRC5CQ9NQ84 441 aa20.47■□□□□ 0.87
COL1A1-206ENST00000485870 FOXD4L1Q9NU39 408 aa20.47■□□□□ 0.87
COL1A1-206ENST00000485870 RNF19AQ9NV58 838 aa20.47■□□□□ 0.87
COL1A1-206ENST00000485870 HCSTQ9UBK5 93 aa20.47■□□□□ 0.87
COL1A1-206ENST00000485870 VCANP13611 3396 aa20.46■□□□□ 0.87
COL1A1-206ENST00000485870 K7ELQ4 463 aaPredicted RBP20.46■□□□□ 0.87
COL1A1-206ENST00000485870 GRM6O15303 877 aa20.46■□□□□ 0.87
COL1A1-206ENST00000485870 HOXA2O43364 376 aa20.46■□□□□ 0.87
COL1A1-206ENST00000485870 ATF7P17544 494 aaPredicted RBP20.46■□□□□ 0.87
COL1A1-206ENST00000485870 GLRA2P23416 452 aa20.46■□□□□ 0.87
COL1A1-206ENST00000485870 ARL2P36404 184 aa20.46■□□□□ 0.87
COL1A1-206ENST00000485870 ABI1Q8IZP0 508 aa20.46■□□□□ 0.87
COL1A1-206ENST00000485870 PLVAPQ9BX97 442 aa20.46■□□□□ 0.87
COL1A1-206ENST00000485870 TMEM117Q9H0C3 514 aa20.46■□□□□ 0.87
COL1A1-206ENST00000485870 AGPAT5Q9NUQ2 364 aa20.46■□□□□ 0.87
COL1A1-206ENST00000485870 TYW1Q9NV66 732 aaKnown RBP20.46■□□□□ 0.87
COL1A1-206ENST00000485870 KIAA1024Q9UPX6 916 aa20.46■□□□□ 0.87
COL1A1-206ENST00000485870 STK24Q9Y6E0 443 aa20.46■□□□□ 0.87
COL1A1-206ENST00000485870 CUL9Q8IWT3 2517 aa20.45■□□□□ 0.86
COL1A1-206ENST00000485870 PDCP20941 246 aa20.45■□□□□ 0.86
COL1A1-206ENST00000485870 MUTP22033 750 aa20.45■□□□□ 0.86
COL1A1-206ENST00000485870 CDC25AP30304 524 aa20.45■□□□□ 0.86
COL1A1-206ENST00000485870 PTENP60484 403 aa20.45■□□□□ 0.86
COL1A1-206ENST00000485870 LONRF3Q496Y0 759 aa20.45■□□□□ 0.86
COL1A1-206ENST00000485870 CLLU1OSQ5K130 101 aa20.45■□□□□ 0.86
COL1A1-206ENST00000485870 KRT79Q5XKE5 535 aa20.45■□□□□ 0.86
COL1A1-206ENST00000485870 PADI6Q6TGC4 694 aa20.45■□□□□ 0.86
COL1A1-206ENST00000485870 BRAPQ7Z569 592 aa20.45■□□□□ 0.86
COL1A1-206ENST00000485870 ZNF598Q86UK7 904 aaKnown RBP20.45■□□□□ 0.86
COL1A1-206ENST00000485870 MCPH1Q8NEM0 835 aa20.45■□□□□ 0.86
COL1A1-206ENST00000485870 CASD1Q96PB1 797 aa20.45■□□□□ 0.86
COL1A1-206ENST00000485870 ALG13Q9NP73 1137 aaKnown RBP20.45■□□□□ 0.86
COL1A1-206ENST00000485870 DDX19AQ9NUU7 478 aaKnown RBP20.45■□□□□ 0.86
COL1A1-206ENST00000485870 INO80B-WBP1J3KQ70 363 aa20.44■□□□□ 0.86
COL1A1-206ENST00000485870 ERLIN2O94905 339 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms