RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 ECM1Q16610 540 aa16.7■□□□□ 0.26
YIF1A-208ENST00000485820 RILPL1Q5EBL4 403 aa16.7■□□□□ 0.26
YIF1A-208ENST00000485820 MICALL1Q8N3F8 863 aa16.7■□□□□ 0.26
YIF1A-208ENST00000485820 NACC1Q96RE7 527 aa16.7■□□□□ 0.26
YIF1A-208ENST00000485820 MTRQ99707 1265 aa16.7■□□□□ 0.26
YIF1A-208ENST00000485820 CHST12Q9NRB3 414 aa16.7■□□□□ 0.26
YIF1A-208ENST00000485820 RNF216Q9NWF9 866 aaPredicted RBP16.7■□□□□ 0.26
YIF1A-208ENST00000485820 DBR1Q9UK59 544 aaKnown RBP16.7■□□□□ 0.26
YIF1A-208ENST00000485820 MRPL42Q9Y6G3 142 aaKnown RBP16.7■□□□□ 0.26
YIF1A-208ENST00000485820 REV3LO60673 3130 aa16.69■□□□□ 0.26
YIF1A-208ENST00000485820 A0A0U1RQF3 1178 aa16.69■□□□□ 0.26
YIF1A-208ENST00000485820 LAD1O00515 517 aa16.69■□□□□ 0.26
YIF1A-208ENST00000485820 IBSPP21815 317 aaPredicted RBP16.69■□□□□ 0.26
YIF1A-208ENST00000485820 ARL2P36404 184 aa16.69■□□□□ 0.26
YIF1A-208ENST00000485820 GPM6BQ13491 265 aa16.69■□□□□ 0.26
YIF1A-208ENST00000485820 PAN2Q504Q3 1202 aaKnown RBP16.69■□□□□ 0.26
YIF1A-208ENST00000485820 SRGAP1Q7Z6B7 1085 aa16.69■□□□□ 0.26
YIF1A-208ENST00000485820 ECHDC2Q86YB7 292 aa16.69■□□□□ 0.26
YIF1A-208ENST00000485820 IGSF22Q8N9C0 903 aa16.69■□□□□ 0.26
YIF1A-208ENST00000485820 ERMNQ8TAM6 284 aa16.69■□□□□ 0.26
YIF1A-208ENST00000485820 MINDY3Q9H8M7 445 aa16.69■□□□□ 0.26
YIF1A-208ENST00000485820 ATP6V0A4Q9HBG4 840 aa16.69■□□□□ 0.26
YIF1A-208ENST00000485820 RNF19AQ9NV58 838 aa16.69■□□□□ 0.26
YIF1A-208ENST00000485820 LRWD1Q9UFC0 647 aa16.69■□□□□ 0.26
YIF1A-208ENST00000485820 UNC80Q8N2C7 3258 aa16.69■□□□□ 0.26
YIF1A-208ENST00000485820 KIAA1671Q9BY89 1806 aa16.68■□□□□ 0.26
YIF1A-208ENST00000485820 FGFR1P11362 822 aa16.68■□□□□ 0.26
YIF1A-208ENST00000485820 MUTP22033 750 aa16.68■□□□□ 0.26
YIF1A-208ENST00000485820 PRPHP41219 470 aa16.68■□□□□ 0.26
YIF1A-208ENST00000485820 POU5F1BQ06416 359 aa16.68■□□□□ 0.26
YIF1A-208ENST00000485820 MXD4Q14582 209 aaPredicted RBP16.68■□□□□ 0.26
YIF1A-208ENST00000485820 POTEGQ6S5H5 508 aa16.68■□□□□ 0.26
YIF1A-208ENST00000485820 ZNF598Q86UK7 904 aaKnown RBP16.68■□□□□ 0.26
YIF1A-208ENST00000485820 RNF149Q8NC42 400 aa16.68■□□□□ 0.26
YIF1A-208ENST00000485820 TRAIPQ9BWF2 469 aa16.68■□□□□ 0.26
YIF1A-208ENST00000485820 DACT1Q9NYF0 836 aa16.68■□□□□ 0.26
YIF1A-208ENST00000485820 RWDD3Q9Y3V2 267 aa16.68■□□□□ 0.26
YIF1A-208ENST00000485820 A0A0C4DFX4 3053 aa16.67■□□□□ 0.26
YIF1A-208ENST00000485820 EOMESO95936 686 aa16.67■□□□□ 0.26
YIF1A-208ENST00000485820 ATF7P17544 494 aaPredicted RBP16.67■□□□□ 0.26
YIF1A-208ENST00000485820 SFPQP23246 707 aaKnown RBP eCLIP16.67■□□□□ 0.26
YIF1A-208ENST00000485820 CTNNB1P35222 781 aa16.67■□□□□ 0.26
YIF1A-208ENST00000485820 CATSPER4Q7RTX7 472 aa16.67■□□□□ 0.26
YIF1A-208ENST00000485820 ASAP3Q8TDY4 903 aa16.67■□□□□ 0.26
YIF1A-208ENST00000485820 MRPL38Q96DV4 380 aaKnown RBP16.67■□□□□ 0.26
YIF1A-208ENST00000485820 CASD1Q96PB1 797 aa16.67■□□□□ 0.26
YIF1A-208ENST00000485820 PLVAPQ9BX97 442 aa16.67■□□□□ 0.26
YIF1A-208ENST00000485820 TBKBP1A7MCY6 615 aa16.66■□□□□ 0.26
YIF1A-208ENST00000485820 GRM6O15303 877 aa16.66■□□□□ 0.26
YIF1A-208ENST00000485820 GLRA2P23416 452 aa16.66■□□□□ 0.26
YIF1A-208ENST00000485820 HOXA11P31270 313 aaPredicted RBP16.66■□□□□ 0.26
YIF1A-208ENST00000485820 CCT6AP40227 531 aaKnown RBP16.66■□□□□ 0.26
YIF1A-208ENST00000485820 PTENP60484 403 aa16.66■□□□□ 0.26
YIF1A-208ENST00000485820 ATP2C1P98194 919 aaPredicted RBP16.66■□□□□ 0.26
YIF1A-208ENST00000485820 DTHD1Q6ZMT9 781 aa16.66■□□□□ 0.26
YIF1A-208ENST00000485820 LRRC55Q6ZSA7 311 aa16.66■□□□□ 0.26
YIF1A-208ENST00000485820 IFNLR1Q8IU57 520 aaPredicted RBP16.66■□□□□ 0.26
YIF1A-208ENST00000485820 P2RX5Q93086 422 aa16.66■□□□□ 0.26
YIF1A-208ENST00000485820 INTS4Q96HW7 963 aaKnown RBP16.66■□□□□ 0.26
YIF1A-208ENST00000485820 TYW1Q9NV66 732 aaKnown RBP16.66■□□□□ 0.26
YIF1A-208ENST00000485820 PLAGL2Q9UPG8 496 aa16.66■□□□□ 0.26
YIF1A-208ENST00000485820 PP2D1A8MPX8 630 aa16.65■□□□□ 0.26
YIF1A-208ENST00000485820 K7ELQ4 463 aaPredicted RBP16.65■□□□□ 0.26
YIF1A-208ENST00000485820 USO1O60763 962 aaKnown RBP16.65■□□□□ 0.26
YIF1A-208ENST00000485820 ZNF623O75123 536 aa16.65■□□□□ 0.26
YIF1A-208ENST00000485820 CYP11B2P19099 503 aa16.65■□□□□ 0.26
YIF1A-208ENST00000485820 CDC25AP30304 524 aa16.65■□□□□ 0.26
YIF1A-208ENST00000485820 PHKA2P46019 1235 aa16.65■□□□□ 0.26
YIF1A-208ENST00000485820 CAPSQ13938 189 aa16.65■□□□□ 0.26
YIF1A-208ENST00000485820 PTPROQ16827 1216 aa16.65■□□□□ 0.26
YIF1A-208ENST00000485820 NAALADL2Q58DX5 795 aa16.65■□□□□ 0.26
YIF1A-208ENST00000485820 CLLU1OSQ5K130 101 aa16.65■□□□□ 0.26
YIF1A-208ENST00000485820 HAUS3Q68CZ6 603 aa16.65■□□□□ 0.26
YIF1A-208ENST00000485820 MAEAQ7L5Y9 396 aa16.65■□□□□ 0.26
YIF1A-208ENST00000485820 ATXN2LQ8WWM7 1075 aaKnown RBP16.65■□□□□ 0.26
YIF1A-208ENST00000485820 MMTAG2Q9BU76 263 aaKnown RBP16.65■□□□□ 0.26
YIF1A-208ENST00000485820 C11orf84Q9BUA3 381 aaPredicted RBP16.65■□□□□ 0.26
YIF1A-208ENST00000485820 RAB34Q9BZG1 259 aa16.65■□□□□ 0.26
YIF1A-208ENST00000485820 TMEM117Q9H0C3 514 aa16.65■□□□□ 0.26
YIF1A-208ENST00000485820 CWH43Q9H720 699 aa16.65■□□□□ 0.26
YIF1A-208ENST00000485820 GPRC5CQ9NQ84 441 aa16.65■□□□□ 0.26
YIF1A-208ENST00000485820 AGPAT5Q9NUQ2 364 aa16.65■□□□□ 0.26
YIF1A-208ENST00000485820 HCSTQ9UBK5 93 aa16.65■□□□□ 0.26
YIF1A-208ENST00000485820 KIAA1024Q9UPX6 916 aa16.65■□□□□ 0.26
YIF1A-208ENST00000485820 PIN4Q9Y237 131 aaKnown RBP16.65■□□□□ 0.26
YIF1A-208ENST00000485820 STK24Q9Y6E0 443 aa16.65■□□□□ 0.26
YIF1A-208ENST00000485820 ATG2AQ2TAZ0 1938 aa16.64■□□□□ 0.26
YIF1A-208ENST00000485820 BRWD1Q9NSI6 2320 aa16.64■□□□□ 0.25
YIF1A-208ENST00000485820 HOXA2O43364 376 aa16.64■□□□□ 0.25
YIF1A-208ENST00000485820 CAMK1Q14012 370 aa16.64■□□□□ 0.25
YIF1A-208ENST00000485820 TFDP1Q14186 410 aa16.64■□□□□ 0.25
YIF1A-208ENST00000485820 SKIV2LQ15477 1246 aaKnown RBP16.64■□□□□ 0.25
YIF1A-208ENST00000485820 TWF2Q6IBS0 349 aaKnown RBP16.64■□□□□ 0.25
YIF1A-208ENST00000485820 PADI6Q6TGC4 694 aa16.64■□□□□ 0.25
YIF1A-208ENST00000485820 BRAPQ7Z569 592 aa16.64■□□□□ 0.25
YIF1A-208ENST00000485820 KLHL23Q8NBE8 558 aa16.64■□□□□ 0.25
YIF1A-208ENST00000485820 MCPH1Q8NEM0 835 aa16.64■□□□□ 0.25
YIF1A-208ENST00000485820 SPPL3Q8TCT6 385 aa16.64■□□□□ 0.25
YIF1A-208ENST00000485820 SNX29Q8TEQ0 813 aa16.64■□□□□ 0.25
YIF1A-208ENST00000485820 SNX21Q969T3 373 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms