RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 PADI3Q9ULW8 664 aa13.18□□□□□ -0.3
APTX-227ENST00000485479 ADGRA3Q8IWK6 1321 aa13.18□□□□□ -0.3
APTX-227ENST00000485479 MYH11P35749 1972 aa13.17□□□□□ -0.3
APTX-227ENST00000485479 GRXCR1A8MXD5 290 aa13.17□□□□□ -0.3
APTX-227ENST00000485479 ARL2P36404 184 aa13.17□□□□□ -0.3
APTX-227ENST00000485479 PTPRSQ13332 1948 aa13.17□□□□□ -0.3
APTX-227ENST00000485479 E2F4Q16254 413 aa13.17□□□□□ -0.3
APTX-227ENST00000485479 ADALQ6DHV7 355 aa13.17□□□□□ -0.3
APTX-227ENST00000485479 FAM117BQ6P1L5 589 aa13.17□□□□□ -0.3
APTX-227ENST00000485479 NME8Q8N427 588 aa13.17□□□□□ -0.3
APTX-227ENST00000485479 RNPC3Q96LT9 517 aaKnown RBP13.17□□□□□ -0.3
APTX-227ENST00000485479 KCNH3Q9ULD8 1083 aa13.17□□□□□ -0.3
APTX-227ENST00000485479 MGEA5O60502 916 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 CAND2O75155 1236 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 RPS6KA5O75582 802 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 FGBP02675 491 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 CXCL10P02778 98 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 CRYBB1P53674 252 aaPredicted RBP13.16□□□□□ -0.3
APTX-227ENST00000485479 DEFB103AP81534 67 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 PAK2Q13177 524 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 PLEKHG4Q58EX7 1191 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.16□□□□□ -0.3
APTX-227ENST00000485479 TSHZ1Q6ZSZ6 1077 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 CDR2LQ86X02 465 aaPredicted RBP13.16□□□□□ -0.3
APTX-227ENST00000485479 MCPH1Q8NEM0 835 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 JPH2Q9BR39 696 aaPredicted RBP13.16□□□□□ -0.3
APTX-227ENST00000485479 PRO3102Q9H379 93 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 TMX1Q9H3N1 280 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 ST3GAL5Q9UNP4 418 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 MICAL3Q7RTP6 2002 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 MYMKA6NI61 221 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 TTLL13PA6NNM8 815 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 EDN1P05305 212 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 KRT18P05783 430 aaKnown RBP13.16□□□□□ -0.3
APTX-227ENST00000485479 DARSP14868 501 aaKnown RBP13.16□□□□□ -0.3
APTX-227ENST00000485479 EIF4BP23588 611 aaKnown RBP13.16□□□□□ -0.3
APTX-227ENST00000485479 AFMP43652 599 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 PEX3P56589 373 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 LONRF3Q496Y0 759 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 CCDC73Q6ZRK6 1079 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 TCP11Q8WWU5 503 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 LINC01599Q8WXQ3 324 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 BLZF1Q9H2G9 400 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 FAM13BQ9NYF5 915 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 SERTAD1Q9UHV2 236 aa13.16□□□□□ -0.3
APTX-227ENST00000485479 INO80B-WBP1J3KQ70 363 aa13.15□□□□□ -0.3
APTX-227ENST00000485479 B4GALT5O43286 388 aa13.15□□□□□ -0.3
APTX-227ENST00000485479 RPUSD2Q8IZ73 545 aaKnown RBP13.15□□□□□ -0.3
APTX-227ENST00000485479 TDHQ8IZJ6 230 aa13.15□□□□□ -0.3
APTX-227ENST00000485479 DDX12PQ92771 950 aa13.15□□□□□ -0.3
APTX-227ENST00000485479 CPB2Q96IY4 423 aa13.15□□□□□ -0.3
APTX-227ENST00000485479 INO80BQ9C086 356 aaPredicted RBP13.15□□□□□ -0.3
APTX-227ENST00000485479 TBC1D7Q9P0N9 293 aa13.15□□□□□ -0.3
APTX-227ENST00000485479 CHD9Q3L8U1 2897 aa13.15□□□□□ -0.3
APTX-227ENST00000485479 CCDC169A6NNP5 214 aa13.14□□□□□ -0.31
APTX-227ENST00000485479 CMA1P23946 247 aa13.14□□□□□ -0.31
APTX-227ENST00000485479 GIT2Q14161 759 aa13.14□□□□□ -0.31
APTX-227ENST00000485479 PSRC1Q6PGN9 363 aaPredicted RBP13.14□□□□□ -0.31
APTX-227ENST00000485479 RTN4RL1Q86UN2 441 aaPredicted RBP13.14□□□□□ -0.31
APTX-227ENST00000485479 MYOCDQ8IZQ8 938 aa13.14□□□□□ -0.31
APTX-227ENST00000485479 MRPS27Q92552 414 aaKnown RBP13.14□□□□□ -0.31
APTX-227ENST00000485479 HPS3Q969F9 1004 aa13.14□□□□□ -0.31
APTX-227ENST00000485479 GCOM2Q9BZD3 368 aaPredicted RBP13.14□□□□□ -0.31
APTX-227ENST00000485479 STK17AQ9UEE5 414 aa13.14□□□□□ -0.31
APTX-227ENST00000485479 HPSEQ9Y251 543 aa13.14□□□□□ -0.31
APTX-227ENST00000485479 PPME1Q9Y570 386 aa13.14□□□□□ -0.31
APTX-227ENST00000485479 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.14□□□□□ -0.31
APTX-227ENST00000485479 GOLGA6L4A6NEF3 574 aa13.14□□□□□ -0.31
APTX-227ENST00000485479 SLC16A4O15374 487 aa13.14□□□□□ -0.31
APTX-227ENST00000485479 GAS2O43903 313 aaKnown RBP13.14□□□□□ -0.31
APTX-227ENST00000485479 UPP2O95045 317 aa13.14□□□□□ -0.31
APTX-227ENST00000485479 IDEP14735 1019 aa13.14□□□□□ -0.31
APTX-227ENST00000485479 RFC2P35250 354 aa13.14□□□□□ -0.31
APTX-227ENST00000485479 NPTX2P47972 431 aa13.14□□□□□ -0.31
APTX-227ENST00000485479 RABGGTBP53611 331 aa13.14□□□□□ -0.31
APTX-227ENST00000485479 WDR5P61964 334 aaKnown RBP13.14□□□□□ -0.31
APTX-227ENST00000485479 MXD4Q14582 209 aaPredicted RBP13.14□□□□□ -0.31
APTX-227ENST00000485479 CNKSR3Q6P9H4 555 aa13.14□□□□□ -0.31
APTX-227ENST00000485479 SV2BQ7L1I2 683 aa13.14□□□□□ -0.31
APTX-227ENST00000485479 SEPT8Q92599 483 aa13.14□□□□□ -0.31
APTX-227ENST00000485479 ERCC4Q92889 916 aaPredicted RBP13.14□□□□□ -0.31
APTX-227ENST00000485479 ERVK-5Q9HDB9 667 aa13.14□□□□□ -0.31
APTX-227ENST00000485479 PIN4Q9Y237 131 aaKnown RBP13.14□□□□□ -0.31
APTX-227ENST00000485479 GBF1Q92538 1859 aa13.13□□□□□ -0.31
APTX-227ENST00000485479 ACTN4O43707 911 aaKnown RBP13.13□□□□□ -0.31
APTX-227ENST00000485479 PRPF40AO75400 957 aaKnown RBP13.13□□□□□ -0.31
APTX-227ENST00000485479 MYOGP15173 224 aa13.13□□□□□ -0.31
APTX-227ENST00000485479 GUCY2CP25092 1073 aa13.13□□□□□ -0.31
APTX-227ENST00000485479 SYKP43405 635 aa13.13□□□□□ -0.31
APTX-227ENST00000485479 MBTD1Q05BQ5 628 aa13.13□□□□□ -0.31
APTX-227ENST00000485479 IKBKEQ14164 716 aa13.13□□□□□ -0.31
APTX-227ENST00000485479 CATSPER4Q7RTX7 472 aa13.13□□□□□ -0.31
APTX-227ENST00000485479 ZNF410Q86VK4 478 aa13.13□□□□□ -0.31
APTX-227ENST00000485479 EXOC8Q8IYI6 725 aa13.13□□□□□ -0.31
APTX-227ENST00000485479 IQUBQ8NA54 791 aa13.13□□□□□ -0.31
APTX-227ENST00000485479 DEPTORQ8TB45 409 aa13.13□□□□□ -0.31
APTX-227ENST00000485479 FGFBP2Q9BYJ0 223 aa13.13□□□□□ -0.31
APTX-227ENST00000485479 SOX1O00570 391 aaPredicted RBP13.12□□□□□ -0.31
APTX-227ENST00000485479 FAM13AO94988 1023 aa13.12□□□□□ -0.31
APTX-227ENST00000485479 PRR29P0C7W0 189 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms