RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 ATP9BO43861 1147 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 EIF5BO60841 1220 aaKnown RBP7.28□□□□□ -1.24
CAPN13-206ENST00000485248 NTRK1P04629 796 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 APPP05067 770 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 TPM2P07951 284 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 PLA2G2AP14555 144 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 HOXC8P31273 242 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 SLC16A2P36021 539 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 GCGRP47871 477 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 MGAT3Q09327 533 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 MTAPQ13126 283 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 PPFIA1Q13136 1202 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 SLC44A4Q53GD3 710 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 UTP14CQ5TAP6 766 aaKnown RBP7.28□□□□□ -1.24
CAPN13-206ENST00000485248 SH3PXD2AQ5TCZ1 1133 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 CYP26C1Q6V0L0 522 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 ZNF852Q6ZMS4 543 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 TPRG1Q6ZUI0 275 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 MTSS1LQ765P7 747 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 AACSQ86V21 672 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 VPS52Q8N1B4 723 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 CLEC4DQ8WXI8 215 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 LINC01599Q8WXQ3 324 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 SSH1Q8WYL5 1049 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 TNPO1Q92973 898 aaKnown RBP7.28□□□□□ -1.24
CAPN13-206ENST00000485248 TATDN2Q93075 761 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 TMEM117Q9H0C3 514 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 FAM49AQ9H0Q0 323 aaPredicted RBP7.28□□□□□ -1.24
CAPN13-206ENST00000485248 ARRDC1-AS1Q9H2J1 176 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 WDR6Q9NNW5 1121 aaKnown RBP7.28□□□□□ -1.24
CAPN13-206ENST00000485248 MSRB2Q9Y3D2 182 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 RAI2Q9Y5P3 530 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 GREB1Q4ZG55 1949 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 WDR19Q8NEZ3 1342 aa7.27□□□□□ -1.24
CAPN13-206ENST00000485248 TSPY2A6NKD2 308 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 CFAP99D6REC4 459 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 TM4SF5O14894 197 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 AXIN1O15169 862 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 NUDT7P0C024 238 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 ZNF806P0C7X5 589 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 TGFB3P10600 412 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 CEACAM1P13688 526 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 PBX3P40426 434 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 METAP2P50579 478 aaKnown RBP eCLIP7.27□□□□□ -1.25
CAPN13-206ENST00000485248 TFAP4Q01664 338 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 ALDH1L2Q3SY69 923 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 GNPTABQ3T906 1256 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 SBK1Q52WX2 424 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 FAM102BQ5T8I3 360 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 SLC24A5Q71RS6 500 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 SMC5Q8IY18 1101 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 FAM160A2Q8N612 972 aaPredicted RBP7.27□□□□□ -1.25
CAPN13-206ENST00000485248 NEDD1Q8NHV4 660 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 HNRNPLLQ8WVV9 542 aaKnown RBP7.27□□□□□ -1.25
CAPN13-206ENST00000485248 TAAR1Q96RJ0 339 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 UBL7Q96S82 380 aaPredicted RBP7.27□□□□□ -1.25
CAPN13-206ENST00000485248 EDEM2Q9BV94 578 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 MAF1Q9H063 256 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 SLC32A1Q9H598 525 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 CWH43Q9H720 699 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 AGO3Q9H9G7 860 aaKnown RBP7.27□□□□□ -1.25
CAPN13-206ENST00000485248 TMEM161AQ9NX61 479 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 ZFP37Q9Y6Q3 630 aaPredicted RBP7.27□□□□□ -1.25
CAPN13-206ENST00000485248 PLIN4Q96Q06 1357 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 C2orf16Q68DN1 1984 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 ABCB11O95342 1321 aa7.27□□□□□ -1.25
CAPN13-206ENST00000485248 PNMA6EA0A0J9YXQ4 647 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 TCRBV5S4A2TA0A5A2 114 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 CAPN8A6NHC0 703 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 ESPNB1AK53 854 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 TK2O00142 265 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 CAPN9O14815 690 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 INPPL1O15357 1258 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 HYAL3O43820 417 aaPredicted RBP7.26□□□□□ -1.25
CAPN13-206ENST00000485248 RPS6KA5O75582 802 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 NR3C2P08235 984 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 HSPD1P10809 573 aaKnown RBP7.26□□□□□ -1.25
CAPN13-206ENST00000485248 FGFR1P11362 822 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 LAMP2P13473 410 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 CD72P21854 359 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 UBA1P22314 1058 aaKnown RBP7.26□□□□□ -1.25
CAPN13-206ENST00000485248 ADD2P35612 726 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 IGBP1P78318 339 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 GPC5P78333 572 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 ATP8B2P98198 1209 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 ADCY1Q08828 1119 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 TROAPQ12815 778 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 HTR4Q13639 388 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 NEDD9Q14511 834 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 CCDC6Q16204 474 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 HS1BP3Q53T59 392 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 TMEM164Q5U3C3 297 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 RTN4RL1Q86UN2 441 aaPredicted RBP7.26□□□□□ -1.25
CAPN13-206ENST00000485248 LONP2Q86WA8 852 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 STK32AQ8WU08 396 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 SMG7Q92540 1137 aaKnown RBP7.26□□□□□ -1.25
CAPN13-206ENST00000485248 LOXL4Q96JB6 756 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 PPP1R9BQ96SB3 815 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 ADAM2Q99965 735 aa7.26□□□□□ -1.25
CAPN13-206ENST00000485248 DDX23Q9BUQ8 820 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms