RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 IL27Q8NEV9 243 aa13.69□□□□□ -0.22
MSH5-216ENST00000484309 PSPC1Q8WXF1 523 aaKnown RBP13.69□□□□□ -0.22
MSH5-216ENST00000484309 MINDY3Q9H8M7 445 aa13.69□□□□□ -0.22
MSH5-216ENST00000484309 ATP6V0A4Q9HBG4 840 aa13.69□□□□□ -0.22
MSH5-216ENST00000484309 IFT122Q9HBG6 1241 aa13.69□□□□□ -0.22
MSH5-216ENST00000484309 ANKEF1Q9NU02 776 aa13.69□□□□□ -0.22
MSH5-216ENST00000484309 TMEM161AQ9NX61 479 aa13.69□□□□□ -0.22
MSH5-216ENST00000484309 PIN4Q9Y237 131 aaKnown RBP13.69□□□□□ -0.22
MSH5-216ENST00000484309 PPME1Q9Y570 386 aa13.69□□□□□ -0.22
MSH5-216ENST00000484309 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.69□□□□□ -0.22
MSH5-216ENST00000484309 DLL1O00548 723 aa13.68□□□□□ -0.22
MSH5-216ENST00000484309 GRM6O15303 877 aa13.68□□□□□ -0.22
MSH5-216ENST00000484309 RARRES1P49788 294 aa13.68□□□□□ -0.22
MSH5-216ENST00000484309 CDC42EP1Q00587 391 aa13.68□□□□□ -0.22
MSH5-216ENST00000484309 LONRF3Q496Y0 759 aa13.68□□□□□ -0.22
MSH5-216ENST00000484309 SPOUT1Q5T280 376 aaKnown RBP13.68□□□□□ -0.22
MSH5-216ENST00000484309 LARP1BQ659C4 914 aaKnown RBP13.68□□□□□ -0.22
MSH5-216ENST00000484309 FERMT3Q86UX7 667 aa13.68□□□□□ -0.22
MSH5-216ENST00000484309 ECHDC2Q86YB7 292 aa13.68□□□□□ -0.22
MSH5-216ENST00000484309 RNF149Q8NC42 400 aa13.68□□□□□ -0.22
MSH5-216ENST00000484309 ERMNQ8TAM6 284 aa13.68□□□□□ -0.22
MSH5-216ENST00000484309 ASAP3Q8TDY4 903 aa13.68□□□□□ -0.22
MSH5-216ENST00000484309 TCP11Q8WWU5 503 aa13.68□□□□□ -0.22
MSH5-216ENST00000484309 CLP1Q92989 425 aaKnown RBP13.68□□□□□ -0.22
MSH5-216ENST00000484309 TUFT1Q9NNX1 390 aa13.68□□□□□ -0.22
MSH5-216ENST00000484309 ALG13Q9NP73 1137 aaKnown RBP13.68□□□□□ -0.22
MSH5-216ENST00000484309 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.68□□□□□ -0.22
MSH5-216ENST00000484309 FOXD4L1Q9NU39 408 aa13.68□□□□□ -0.22
MSH5-216ENST00000484309 RNF19AQ9NV58 838 aa13.68□□□□□ -0.22
MSH5-216ENST00000484309 RWDD3Q9Y3V2 267 aa13.68□□□□□ -0.22
MSH5-216ENST00000484309 PP2D1A8MPX8 630 aa13.67□□□□□ -0.22
MSH5-216ENST00000484309 DGAT1O75907 488 aa13.67□□□□□ -0.22
MSH5-216ENST00000484309 CCT6AP40227 531 aaKnown RBP13.67□□□□□ -0.22
MSH5-216ENST00000484309 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.22
MSH5-216ENST00000484309 FAM189BP81408 668 aa13.67□□□□□ -0.22
MSH5-216ENST00000484309 ECM1Q16610 540 aa13.67□□□□□ -0.22
MSH5-216ENST00000484309 TWF2Q6IBS0 349 aaKnown RBP13.67□□□□□ -0.22
MSH5-216ENST00000484309 EXOC8Q8IYI6 725 aa13.67□□□□□ -0.22
MSH5-216ENST00000484309 HELQQ8TDG4 1101 aa13.67□□□□□ -0.22
MSH5-216ENST00000484309 LPPQ93052 612 aa13.67□□□□□ -0.22
MSH5-216ENST00000484309 MRPL38Q96DV4 380 aaKnown RBP13.67□□□□□ -0.22
MSH5-216ENST00000484309 C11orf84Q9BUA3 381 aaPredicted RBP13.67□□□□□ -0.22
MSH5-216ENST00000484309 POLR3CQ9BUI4 534 aaPredicted RBP13.67□□□□□ -0.22
MSH5-216ENST00000484309 COL25A1Q9BXS0 654 aaPredicted RBP13.67□□□□□ -0.22
MSH5-216ENST00000484309 INO80BQ9C086 356 aaPredicted RBP13.67□□□□□ -0.22
MSH5-216ENST00000484309 POLR3FQ9H1D9 316 aaPredicted RBP13.67□□□□□ -0.22
MSH5-216ENST00000484309 GPRC5CQ9NQ84 441 aa13.67□□□□□ -0.22
MSH5-216ENST00000484309 LMCD1Q9NZU5 365 aa13.67□□□□□ -0.22
MSH5-216ENST00000484309 LRWD1Q9UFC0 647 aa13.67□□□□□ -0.22
MSH5-216ENST00000484309 VPS37CA5D8V6 355 aaPredicted RBP13.66□□□□□ -0.22
MSH5-216ENST00000484309 C5orf67F2Z3F1 127 aa13.66□□□□□ -0.22
MSH5-216ENST00000484309 GAS2O43903 313 aaKnown RBP13.66□□□□□ -0.22
MSH5-216ENST00000484309 RB1P06400 928 aa13.66□□□□□ -0.22
MSH5-216ENST00000484309 ATF7P17544 494 aaPredicted RBP13.66□□□□□ -0.22
MSH5-216ENST00000484309 RPA1P27694 616 aa13.66□□□□□ -0.22
MSH5-216ENST00000484309 CDC25AP30304 524 aa13.66□□□□□ -0.22
MSH5-216ENST00000484309 CUL4AQ13619 759 aa13.66□□□□□ -0.22
MSH5-216ENST00000484309 CAPSQ13938 189 aa13.66□□□□□ -0.22
MSH5-216ENST00000484309 IL17AQ16552 155 aa13.66□□□□□ -0.22
MSH5-216ENST00000484309 PTPROQ16827 1216 aa13.66□□□□□ -0.22
MSH5-216ENST00000484309 RILPL1Q5EBL4 403 aa13.66□□□□□ -0.22
MSH5-216ENST00000484309 CLLU1OSQ5K130 101 aa13.66□□□□□ -0.22
MSH5-216ENST00000484309 HAUS3Q68CZ6 603 aa13.66□□□□□ -0.22
MSH5-216ENST00000484309 KLHL23Q8NBE8 558 aa13.66□□□□□ -0.22
MSH5-216ENST00000484309 SNX29Q8TEQ0 813 aa13.66□□□□□ -0.22
MSH5-216ENST00000484309 NACC1Q96RE7 527 aa13.66□□□□□ -0.22
MSH5-216ENST00000484309 ELAC1Q9H777 363 aaKnown RBP13.66□□□□□ -0.22
MSH5-216ENST00000484309 TYW1Q9NV66 732 aaKnown RBP13.66□□□□□ -0.22
MSH5-216ENST00000484309 RNF216Q9NWF9 866 aaPredicted RBP13.66□□□□□ -0.22
MSH5-216ENST00000484309 DACT1Q9NYF0 836 aa13.66□□□□□ -0.22
MSH5-216ENST00000484309 TRIP11Q15643 1979 aa13.65□□□□□ -0.22
MSH5-216ENST00000484309 SPTBN5Q9NRC6 3674 aaKnown RBP13.65□□□□□ -0.22
MSH5-216ENST00000484309 MEIS3P2A8K0S8 358 aa13.65□□□□□ -0.22
MSH5-216ENST00000484309 ITGB1P05556 798 aa13.65□□□□□ -0.22
MSH5-216ENST00000484309 GLRA2P23416 452 aa13.65□□□□□ -0.22
MSH5-216ENST00000484309 DNAJB1P25685 340 aa13.65□□□□□ -0.22
MSH5-216ENST00000484309 PBX3P40426 434 aa13.65□□□□□ -0.22
MSH5-216ENST00000484309 PHKA2P46019 1235 aa13.65□□□□□ -0.22
MSH5-216ENST00000484309 KCNQ1P51787 676 aa13.65□□□□□ -0.22
MSH5-216ENST00000484309 TCEAL5Q5H9L2 206 aa13.65□□□□□ -0.22
MSH5-216ENST00000484309 LRRC55Q6ZSA7 311 aa13.65□□□□□ -0.22
MSH5-216ENST00000484309 SRGAP1Q7Z6B7 1085 aa13.65□□□□□ -0.22
MSH5-216ENST00000484309 ZNF598Q86UK7 904 aaKnown RBP13.65□□□□□ -0.22
MSH5-216ENST00000484309 ABI1Q8IZP0 508 aa13.65□□□□□ -0.22
MSH5-216ENST00000484309 CASD1Q96PB1 797 aa13.65□□□□□ -0.22
MSH5-216ENST00000484309 TMEM117Q9H0C3 514 aa13.65□□□□□ -0.22
MSH5-216ENST00000484309 POLD4Q9HCU8 107 aa13.65□□□□□ -0.22
MSH5-216ENST00000484309 CHST12Q9NRB3 414 aa13.65□□□□□ -0.22
MSH5-216ENST00000484309 AGPAT5Q9NUQ2 364 aa13.65□□□□□ -0.22
MSH5-216ENST00000484309 DBR1Q9UK59 544 aaKnown RBP13.65□□□□□ -0.22
MSH5-216ENST00000484309 PLAGL2Q9UPG8 496 aa13.65□□□□□ -0.22
MSH5-216ENST00000484309 KIAA1024Q9UPX6 916 aa13.65□□□□□ -0.22
MSH5-216ENST00000484309 A0A0U1RQF3 1178 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 ARHGEF35A5YM69 484 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 INO80B-WBP1J3KQ70 363 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 ASAP2O43150 1006 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 HOXA2O43364 376 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 ERLIN2O94905 339 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 XRCC6P12956 609 aaKnown RBP eCLIP13.64□□□□□ -0.23
MSH5-216ENST00000484309 ARL2P36404 184 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms